RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 TTLL11Q8NHH1 800 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 NT5C1BQ96P26 610 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 SLC7A5P2Q9GIP4 190 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 KLC2Q9H0B6 622 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 DNAJC17Q9NVM6 304 aaKnown RBP6.33□□□□□ -1.4
RFX3-204ENST00000382004 TPCN1Q9ULQ1 816 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 MRPL11Q9Y3B7 192 aaKnown RBP6.33□□□□□ -1.4
RFX3-204ENST00000382004 EPN1Q9Y6I3 576 aaPredicted RBP6.33□□□□□ -1.4
RFX3-204ENST00000382004 EXOC1LA0A1B0GW35 172 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 EYA2O00167 538 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 ATP2B4P23634 1241 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 AOC3Q16853 763 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 PATL1Q86TB9 770 aaKnown RBP6.33□□□□□ -1.4
RFX3-204ENST00000382004 RNF139Q8WU17 664 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 ZNF229Q9UJW7 825 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 FBXO2Q9UK22 296 aaPredicted RBP6.33□□□□□ -1.4
RFX3-204ENST00000382004 COL4A3BPQ9Y5P4 624 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 TCP10L2B9ZVM9 353 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 HSPA4LO95757 839 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 PDHA1P08559 390 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 GFAPP14136 432 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 BLIDQ8IZY5 108 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 SPATA5Q8NB90 893 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 LRRC4Q9HBW1 653 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 CCNL1Q9UK58 526 aaPredicted RBP6.33□□□□□ -1.4
RFX3-204ENST00000382004 PPIP5K2O43314 1243 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 NBNO60934 754 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 ECEL1O95672 775 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 KITP10721 976 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 PYGBP11216 843 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 VCAM1P19320 739 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 APBA1Q02410 837 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 DEUP1Q05D60 604 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 RWDD4Q6NW29 188 aaKnown RBP6.33□□□□□ -1.4
RFX3-204ENST00000382004 RGS9BPQ6ZS82 235 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 ARMC9Q7Z3E5 817 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 ZNF467Q7Z7K2 595 aaPredicted RBP6.33□□□□□ -1.4
RFX3-204ENST00000382004 HSPH1Q92598 858 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 NRBP2Q9NSY0 501 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 HECW1Q76N89 1606 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 HNRNPDLO14979 420 aaKnown RBP6.33□□□□□ -1.4
RFX3-204ENST00000382004 C10orf76Q5T2E6 689 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 PLEKHM3Q6ZWE6 761 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 CRLF3Q8IUI8 442 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 OR9Q1Q8NGQ5 310 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 SLC26A7Q8TE54 656 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 ZNF215Q9UL58 517 aaPredicted RBP6.33□□□□□ -1.4
RFX3-204ENST00000382004 COPG1Q9Y678 874 aaKnown RBP6.33□□□□□ -1.4
RFX3-204ENST00000382004 MAPK13O15264 365 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 KDM1AO60341 852 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 SNX2O60749 519 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 ZNF18P17022 549 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 BPIFB4P59827 614 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 FBXO11Q86XK2 927 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 SRRM1Q8IYB3 904 aaKnown RBP6.33□□□□□ -1.4
RFX3-204ENST00000382004 TSPYL6Q8N831 410 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 PPP1R16BQ96T49 567 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 SLITRK6Q9H5Y7 841 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 KIAA1468Q9P260 1216 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 POLIQ9UNA4 740 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 ANKRD36BQ8N2N9 1353 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 ZNF233A6NK53 670 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 ORC4O43929 436 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 SLC35F6Q8N357 371 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 ZNF280CQ8ND82 737 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 GPKOWQ92917 476 aaPredicted RBP eCLIP6.33□□□□□ -1.4
RFX3-204ENST00000382004 TESK2Q96S53 571 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 GINM1Q9NU53 330 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 NXF1Q9UBU9 619 aaKnown RBP6.33□□□□□ -1.4
RFX3-204ENST00000382004 ZNF711Q9Y462 761 aa6.33□□□□□ -1.4
RFX3-204ENST00000382004 INO80B-WBP1J3KQ70 363 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 OR52Z1P0C646 297 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 TAC1P20366 129 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 TFAMQ00059 246 aaKnown RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 TFDP1Q14186 410 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 ODR4Q5SWX8 454 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 ZNF654Q8IZM8 581 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 CNOT6LQ96LI5 555 aaKnown RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 INO80BQ9C086 356 aaPredicted RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 FANCLQ9NW38 375 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 GTSE1Q9NYZ3 720 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 DMRT2Q9Y5R5 561 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 TOM1O60784 492 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 ANXA13P27216 316 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 PPARGP37231 505 aaPredicted RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 ZAP70P43403 619 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 EIF4A2Q14240 407 aaKnown RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 BBS9Q3SYG4 887 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 DPP9Q86TI2 863 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 PDCD6IPQ8WUM4 868 aaKnown RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 SLC24A3Q9HC58 644 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 SARS2Q9NP81 518 aaKnown RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 PRKAG2Q9UGJ0 569 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 DBNLQ9UJU6 430 aaKnown RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 LZTS1Q9Y250 596 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 H0Y3Z8 333 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 GOLGA8HP0CJ92 632 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 GTF2IP78347 998 aa6.32□□□□□ -1.4
RFX3-204ENST00000382004 LBRQ14739 615 aaKnown RBP6.32□□□□□ -1.4
RFX3-204ENST00000382004 CDO1Q16878 200 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms