RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 PRPHP41219 470 aa18.02■□□□□ 0.48
NKX3-1-201ENST00000380871 RRAGAQ7L523 313 aa18.02■□□□□ 0.48
NKX3-1-201ENST00000380871 TEKT1Q969V4 418 aa18.02■□□□□ 0.48
NKX3-1-201ENST00000380871 CDK5RAP3Q96JB5 506 aa18.02■□□□□ 0.48
NKX3-1-201ENST00000380871 SPZ1Q9BXG8 430 aa18.02■□□□□ 0.48
NKX3-1-201ENST00000380871 POLD4Q9HCU8 107 aa18.02■□□□□ 0.48
NKX3-1-201ENST00000380871 CCDC88AQ3V6T2 1871 aa18.02■□□□□ 0.47
NKX3-1-201ENST00000380871 GOLGA6BA6NDN3 693 aa18.02■□□□□ 0.47
NKX3-1-201ENST00000380871 DNAJC21Q5F1R6 531 aaKnown RBP18.02■□□□□ 0.47
NKX3-1-201ENST00000380871 NLGN1Q8N2Q7 840 aa18.02■□□□□ 0.47
NKX3-1-201ENST00000380871 AENQ8WTP8 325 aaKnown RBP18.02■□□□□ 0.47
NKX3-1-201ENST00000380871 LZTS2Q9BRK4 669 aa18.02■□□□□ 0.47
NKX3-1-201ENST00000380871 NDST4Q9H3R1 872 aa18.02■□□□□ 0.47
NKX3-1-201ENST00000380871 DEF6Q9H4E7 631 aa18.02■□□□□ 0.47
NKX3-1-201ENST00000380871 PLAGL2Q9UPG8 496 aa18.02■□□□□ 0.47
NKX3-1-201ENST00000380871 BUB1O43683 1085 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 GDF11O95390 407 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 APBA1Q02410 837 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 GFPT1Q06210 699 aaPredicted RBP18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 VWA3BQ502W6 1294 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 SPATA4Q8NEY3 305 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 MS4A14Q96JA4 679 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 NUDT12Q9BQG2 462 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 BLOC1S4Q9NUP1 217 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 GAKO14976 1311 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 MCM3P25205 808 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 GRB10Q13322 594 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 TMED8Q6PL24 325 aaPredicted RBP18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 RPGRIP1Q96KN7 1286 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 KANSL2Q9H9L4 492 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 JRKLQ9Y4A0 524 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 SLC37A4O43826 429 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 AKR1B10O60218 316 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 HLA-DOAP06340 250 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 ADCY7P51828 1080 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 KCTD19Q17RG1 926 aaPredicted RBP18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 FAM114A1Q8IWE2 563 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 ADGRF4Q8IZF3 695 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 OSBPL9Q96SU4 736 aa18.01■□□□□ 0.47
NKX3-1-201ENST00000380871 ROBO3Q96MS0 1386 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 LAD1O00515 517 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 NPR1P16066 1061 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 CRKP46108 304 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 CALCRLQ16602 461 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 TSEN2Q8NCE0 465 aaKnown RBP18■□□□□ 0.47
NKX3-1-201ENST00000380871 TRIM58Q8NG06 486 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 USP17L15C9J2P7 530 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 USP17L13C9JLJ4 530 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 USP17L11C9JVI0 530 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 USP17L18D6R9N7 530 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 USP17L22D6RA61 530 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 USP17L17D6RBQ6 530 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 USP17L19D6RCP7 530 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 USP17L20D6RJB6 530 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 USP17L24Q0WX57 530 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 USP17L6PQ6QN14 398 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 KCNK18Q7Z418 384 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 CCDC47Q96A33 483 aaKnown RBP18■□□□□ 0.47
NKX3-1-201ENST00000380871 MTMR8Q96EF0 704 aa18■□□□□ 0.47
NKX3-1-201ENST00000380871 A0A1W2PQJ5 194 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 GOLGA6CA6NDK9 693 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 TACC1O75410 805 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 GOLGA6DP0CG33 693 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 CENPPQ6IPU0 288 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 CNNM4Q6P4Q7 775 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 FAM163AQ96GL9 167 aaPredicted RBP17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 AK8Q96MA6 479 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 CUEDC2Q9H467 287 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 GOLGA6AQ9NYA3 693 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 FAM184BQ9ULE4 1060 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 TTLL1O95922 423 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 SLC1A4P43007 532 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 RASSF7Q02833 373 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 PNMA5Q96PV4 448 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 NLRC4Q9NPP4 1024 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 ZSCAN5CA6NGD5 496 aaPredicted RBP17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 SHMT1P34896 483 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 APOBEC3HQ6NTF7 200 aaKnown RBP17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 CALML4Q96GE6 196 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 JMJD4Q9H9V9 463 aa17.99■□□□□ 0.47
NKX3-1-201ENST00000380871 DDTLA6NHG4 134 aaPredicted RBP17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 USO1O60763 962 aaKnown RBP17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 FIGNQ5HY92 759 aa17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 GALNT17Q6IS24 598 aa17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 FAM76AQ8TAV0 307 aa17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 TSGA10Q9BZW7 698 aa17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 ZHX3Q9H4I2 956 aa17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 RBM12Q9NTZ6 932 aaKnown RBP17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 TBC1D7Q9P0N9 293 aa17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 NHSQ6T4R5 1651 aa17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 ESYT3A0FGR9 886 aa17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 PPFIA4O75335 1185 aa17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 ALDH1B1P30837 517 aa17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 CDK17Q00537 523 aa17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 HAUS3Q68CZ6 603 aa17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 PACS2Q86VP3 889 aa17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 BAP1Q92560 729 aa17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 TANGO6Q9C0B7 1094 aa17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 TDRD3Q9H7E2 651 aaKnown RBP17.98■□□□□ 0.47
NKX3-1-201ENST00000380871 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms