RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 CNGA4Q8IV77 575 aa21.47■■□□□ 1.03
GMDS-201ENST00000380805 FAM114A1Q8IWE2 563 aa21.47■■□□□ 1.03
GMDS-201ENST00000380805 MICALL2Q8IY33 904 aa21.47■■□□□ 1.03
GMDS-201ENST00000380805 CSGALNACT2Q8N6G5 542 aa21.47■■□□□ 1.03
GMDS-201ENST00000380805 ZNF507Q8TCN5 953 aa21.47■■□□□ 1.03
GMDS-201ENST00000380805 KIFC2Q96AC6 838 aa21.47■■□□□ 1.03
GMDS-201ENST00000380805 VAV3Q9UKW4 847 aa21.47■■□□□ 1.03
GMDS-201ENST00000380805 MSH4O15457 936 aa21.46■■□□□ 1.03
GMDS-201ENST00000380805 RPA1P27694 616 aa21.46■■□□□ 1.03
GMDS-201ENST00000380805 RBL2Q08999 1139 aa21.46■■□□□ 1.03
GMDS-201ENST00000380805 PPFIBP1Q86W92 1011 aa21.46■■□□□ 1.03
GMDS-201ENST00000380805 ERMNQ8TAM6 284 aa21.46■■□□□ 1.03
GMDS-201ENST00000380805 VPS16Q9H269 839 aa21.46■■□□□ 1.03
GMDS-201ENST00000380805 PITPNM2Q9BZ72 1349 aa21.46■■□□□ 1.03
GMDS-201ENST00000380805 RIOK3O14730 519 aaKnown RBP21.46■■□□□ 1.03
GMDS-201ENST00000380805 MED24O75448 989 aa21.46■■□□□ 1.03
GMDS-201ENST00000380805 ZNF341Q9BYN7 854 aa21.46■■□□□ 1.03
GMDS-201ENST00000380805 SEMA6BQ9H3T3 888 aa21.46■■□□□ 1.03
GMDS-201ENST00000380805 ZNF536O15090 1300 aa21.45■■□□□ 1.02
GMDS-201ENST00000380805 POTEB3A0JP26 581 aa21.45■■□□□ 1.02
GMDS-201ENST00000380805 FRMD3A2A2Y4 597 aa21.45■■□□□ 1.02
GMDS-201ENST00000380805 POTECB2RU33 542 aa21.45■■□□□ 1.02
GMDS-201ENST00000380805 ZSCAN12O43309 604 aa21.45■■□□□ 1.02
GMDS-201ENST00000380805 ICAM1P05362 532 aa21.45■■□□□ 1.02
GMDS-201ENST00000380805 LRRC63Q05C16 580 aa21.45■■□□□ 1.02
GMDS-201ENST00000380805 CCDC174Q6PII3 467 aa21.45■■□□□ 1.02
GMDS-201ENST00000380805 POTEBQ6S5H4 581 aa21.45■■□□□ 1.02
GMDS-201ENST00000380805 DYMQ7RTS9 669 aa21.45■■□□□ 1.02
GMDS-201ENST00000380805 LDHDQ86WU2 507 aa21.45■■□□□ 1.02
GMDS-201ENST00000380805 EHMT1Q9H9B1 1298 aa21.45■■□□□ 1.02
GMDS-201ENST00000380805 MAGEC2Q9UBF1 373 aaPredicted RBP21.45■■□□□ 1.02
GMDS-201ENST00000380805 CNOT7Q9UIV1 285 aaKnown RBP21.45■■□□□ 1.02
GMDS-201ENST00000380805 KIAA1024Q9UPX6 916 aa21.45■■□□□ 1.02
GMDS-201ENST00000380805 PLA2G4BP0C869 781 aa21.44■■□□□ 1.02
GMDS-201ENST00000380805 ZYXQ15942 572 aaKnown RBP21.44■■□□□ 1.02
GMDS-201ENST00000380805 REXO1L1PQ8IX06 675 aa21.44■■□□□ 1.02
GMDS-201ENST00000380805 GPC2Q8N158 579 aa21.44■■□□□ 1.02
GMDS-201ENST00000380805 MB21D1Q8N884 522 aa21.44■■□□□ 1.02
GMDS-201ENST00000380805 SLC39A2Q9NP94 309 aa21.44■■□□□ 1.02
GMDS-201ENST00000380805 BMP2KQ9NSY1 1161 aaPredicted RBP21.44■■□□□ 1.02
GMDS-201ENST00000380805 FBXO28Q9NVF7 368 aa21.44■■□□□ 1.02
GMDS-201ENST00000380805 HACL1Q9UJ83 578 aa21.44■■□□□ 1.02
GMDS-201ENST00000380805 RABGAP1Q9Y3P9 1069 aa21.44■■□□□ 1.02
GMDS-201ENST00000380805 ZC3H4Q9UPT8 1303 aaKnown RBP21.44■■□□□ 1.02
GMDS-201ENST00000380805 GOLGA6L9A6NEM1 432 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 E9PMD0 336 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 CTIFO43310 598 aaKnown RBP21.43■■□□□ 1.02
GMDS-201ENST00000380805 CFBP00751 764 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 SPATA31C1P0DKV0 1188 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 STAT3P40763 770 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 HSD17B4P51659 736 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 SLC12A3P55017 1021 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 COASYQ13057 564 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 CATSPER3Q86XQ3 398 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 HPS3Q969F9 1004 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 POLR3CQ9BUI4 534 aaPredicted RBP21.43■■□□□ 1.02
GMDS-201ENST00000380805 LOXHD1Q8IVV2 1947 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 PHIPQ8WWQ0 1821 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 TPM1P09493 284 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 CYP11B2P19099 503 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 CASP14P31944 242 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 INPP5BP32019 993 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 DNM2P50570 870 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 FXR1P51114 621 aaKnown RBP eCLIP21.43■■□□□ 1.02
GMDS-201ENST00000380805 KIF4BQ2VIQ3 1234 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 SAMD7Q7Z3H4 446 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 PRPF38AQ8NAV1 312 aaKnown RBP21.43■■□□□ 1.02
GMDS-201ENST00000380805 TBC1D5Q92609 795 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 FEZ1Q99689 392 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 SLF1Q9BQI6 1058 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 ZNF112Q9UJU3 913 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 PPP2R2CQ9Y2T4 447 aa21.43■■□□□ 1.02
GMDS-201ENST00000380805 GLTPD2A6NH11 291 aa21.42■■□□□ 1.02
GMDS-201ENST00000380805 UBXN1Q04323 297 aa21.42■■□□□ 1.02
GMDS-201ENST00000380805 ZCWPW2Q504Y3 356 aa21.42■■□□□ 1.02
GMDS-201ENST00000380805 DPY19L2Q6NUT2 758 aa21.42■■□□□ 1.02
GMDS-201ENST00000380805 CCDC84Q86UT8 332 aaPredicted RBP21.42■■□□□ 1.02
GMDS-201ENST00000380805 SAMD3Q8N6K7 520 aa21.42■■□□□ 1.02
GMDS-201ENST00000380805 KIF18AQ8NI77 898 aa21.42■■□□□ 1.02
GMDS-201ENST00000380805 SLC5A5Q92911 643 aa21.42■■□□□ 1.02
GMDS-201ENST00000380805 CNOT6LQ96LI5 555 aaKnown RBP21.42■■□□□ 1.02
GMDS-201ENST00000380805 TUBGCP2Q9BSJ2 902 aa21.42■■□□□ 1.02
GMDS-201ENST00000380805 WDR18Q9BV38 432 aa21.42■■□□□ 1.02
GMDS-201ENST00000380805 PCDHA2Q9Y5H9 948 aa21.42■■□□□ 1.02
GMDS-201ENST00000380805 ASTN2O75129 1339 aaPredicted RBP21.42■■□□□ 1.02
GMDS-201ENST00000380805 RPTORQ8N122 1335 aa21.42■■□□□ 1.02
GMDS-201ENST00000380805 IDEP14735 1019 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 PPP2R5CQ13362 524 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 FAM26FQ5R3K3 315 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 CCDC65Q8IXS2 484 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 SYT2Q8N9I0 419 aaPredicted RBP21.41■■□□□ 1.02
GMDS-201ENST00000380805 CYP2W1Q8TAV3 490 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 PANK4Q9NVE7 773 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 POTEFA5A3E0 1075 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 PSMD10O75832 226 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 FGFR1OPO95684 399 aaKnown RBP21.41■■□□□ 1.02
GMDS-201ENST00000380805 POTEIP0CG38 1075 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 ZNF76P36508 570 aa21.41■■□□□ 1.02
GMDS-201ENST00000380805 ETF1P62495 437 aaKnown RBP21.41■■□□□ 1.02
GMDS-201ENST00000380805 SETQ01105 290 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms