RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 COBLL1Q53SF7 1204 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 KIAA1755Q5JYT7 1200 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 DNAJC19Q96DA6 116 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 CSRNP1Q96S65 589 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 FGFBP2Q9BYJ0 223 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 TTYH3Q9C0H2 523 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 KCNMB3Q9NPA1 279 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 ZNF446Q9NWS9 450 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 TRIM10Q9UDY6 481 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 CAPN11Q9UMQ6 739 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 LUC7L2Q9Y383 392 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 PSME4Q14997 1843 aa8.88□□□□□ -0.99
PDLIM5-204ENST00000380176 ATRNL1Q5VV63 1379 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 NPHP3-ACAD11A0A0J9YXS1 232 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 PVALEFA0A1B0GWK0 134 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 GPR37O15354 613 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 TFRCP02786 760 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 ECE1P42892 770 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 MTIF2P46199 727 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 IKQ13123 557 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 ZNF569Q5MCW4 686 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 SMYD5Q6GMV2 418 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 MNS1Q8NEH6 495 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 OR8K1Q8NGG5 319 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 NOC3LQ8WTT2 800 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 CRYGNQ8WXF5 182 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 CCDC102AQ96A19 550 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 DNAJC7Q99615 494 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 NOC4LQ9BVI4 516 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 POTEB3A0JP26 581 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 POTECB2RU33 542 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 OPLAHO14841 1288 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 H2AFXP16104 143 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 GCFC2P16383 781 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 POTEBQ6S5H4 581 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 CDAN1Q8IWY9 1227 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 GMCL1P1Q8NEA9 526 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 KCNG1Q9UIX4 513 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 KIAA1024Q9UPX6 916 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 EPN1Q9Y6I3 576 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 COL4A5P29400 1685 aa8.87□□□□□ -0.99
PDLIM5-204ENST00000380176 ENTPD3O75355 529 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 MED24O75448 989 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 RAD17O75943 681 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 NDUFA10O95299 355 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 SSBP05455 408 aaKnown RBP eCLIP8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 HOXA13P31271 388 aaPredicted RBP8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 PPP2R3AQ06190 1150 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 RAD51AP2Q09MP3 1159 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 SLC35F6Q8N357 371 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 UBXN4Q92575 508 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 AMNQ9BXJ7 453 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 TSPYL2Q9H2G4 693 aaPredicted RBP8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 TBC1D7Q9P0N9 293 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 DDX41Q9UJV9 622 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 CYP3A7-CYP3A51PA0A087WV96 503 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 KIF5CO60282 957 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 BMP3P12645 472 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 TRIM21P19474 475 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 CYP3A7P24462 503 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 USP11P51784 963 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 ARHGAP4P98171 946 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 COASYQ13057 564 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 PRR16Q569H4 304 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 SYDE2Q5VT97 1194 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 CC2D2BQ6DHV5 1058 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 FBXO11Q86XK2 927 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 GUF1Q8N442 669 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 ACER1Q8TDN7 264 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 GMCL1Q96IK5 515 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 RGPD3A6NKT7 1758 aaPredicted RBP8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 RGPD4Q7Z3J3 1758 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 EFCAB8A8MWE9 144 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 FAM86B1E9PN63 330 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 EPHB6O15197 1021 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 FAM86B2P0C5J1 330 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 CLCN6P51797 869 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 SPIRE1Q08AE8 756 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 HYIQ5T013 277 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 CYP2W1Q8TAV3 490 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 ETNPPLQ8TBG4 499 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 LENG9Q96B70 501 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 MBOAT7Q96N66 472 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 CAMKK2Q96RR4 588 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 FEZ1Q99689 392 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 ZSWIM4Q9H7M6 989 aa8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.86□□□□□ -0.99
PDLIM5-204ENST00000380176 POTEFA5A3E0 1075 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 PSMD14O00487 310 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 POTEIP0CG38 1075 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 PPP1R2P41236 205 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 PSMC6P62333 389 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 HERVK_113P62684 666 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 POTEGQ6S5H5 508 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 POTEEQ6S8J3 1075 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 SLC30A10Q6XR72 485 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 LRRC55Q6ZSA7 311 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 FAM114A1Q8IWE2 563 aa8.85□□□□□ -0.99
PDLIM5-204ENST00000380176 PCMTD1Q96MG8 357 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms