RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 ARMCX2Q7L311 632 aa14.64□□□□□ -0.07
CBWD3-203ENST00000377344 NIPA1Q7RTP0 329 aa14.64□□□□□ -0.07
CBWD3-203ENST00000377344 ETNPPLQ8TBG4 499 aa14.64□□□□□ -0.07
CBWD3-203ENST00000377344 CD99L2Q8TCZ2 262 aa14.64□□□□□ -0.07
CBWD3-203ENST00000377344 MAML3Q96JK9 1138 aa14.64□□□□□ -0.07
CBWD3-203ENST00000377344 FAM20AQ96MK3 541 aa14.64□□□□□ -0.07
CBWD3-203ENST00000377344 CSRNP2Q9H175 543 aa14.64□□□□□ -0.07
CBWD3-203ENST00000377344 TTC12Q9H892 705 aaPredicted RBP14.64□□□□□ -0.07
CBWD3-203ENST00000377344 DIS3Q9Y2L1 958 aaKnown RBP14.64□□□□□ -0.07
CBWD3-203ENST00000377344 ZNF236Q9UL36 1845 aa14.63□□□□□ -0.07
CBWD3-203ENST00000377344 MGAMO43451 1857 aa14.63□□□□□ -0.07
CBWD3-203ENST00000377344 TBX3O15119 743 aa14.63□□□□□ -0.07
CBWD3-203ENST00000377344 PTMSP20962 102 aa14.63□□□□□ -0.07
CBWD3-203ENST00000377344 IL17AQ16552 155 aa14.63□□□□□ -0.07
CBWD3-203ENST00000377344 AXDND1Q5T1B0 1012 aaPredicted RBP14.63□□□□□ -0.07
CBWD3-203ENST00000377344 ZNF467Q7Z7K2 595 aaPredicted RBP14.63□□□□□ -0.07
CBWD3-203ENST00000377344 GPRASP2Q96D09 838 aa14.63□□□□□ -0.07
CBWD3-203ENST00000377344 INPP4AQ96PE3 977 aaPredicted RBP14.63□□□□□ -0.07
CBWD3-203ENST00000377344 GJD2Q9UKL4 321 aa14.63□□□□□ -0.07
CBWD3-203ENST00000377344 PCDHA12Q9UN75 941 aa14.63□□□□□ -0.07
CBWD3-203ENST00000377344 MORC2Q9Y6X9 1032 aaPredicted RBP14.63□□□□□ -0.07
CBWD3-203ENST00000377344 CEP350Q5VT06 3117 aa14.63□□□□□ -0.07
CBWD3-203ENST00000377344 LOC102724159A0A0B4J2E5 919 aa14.62□□□□□ -0.07
CBWD3-203ENST00000377344 IPO5O00410 1097 aaKnown RBP14.62□□□□□ -0.07
CBWD3-203ENST00000377344 RGS20O76081 388 aa14.62□□□□□ -0.07
CBWD3-203ENST00000377344 PWP2Q15269 919 aaKnown RBP14.62□□□□□ -0.07
CBWD3-203ENST00000377344 LRCH2Q5VUJ6 765 aa14.62□□□□□ -0.07
CBWD3-203ENST00000377344 FBXO16Q8IX29 292 aaPredicted RBP14.62□□□□□ -0.07
CBWD3-203ENST00000377344 CDHR1Q96JP9 859 aa14.62□□□□□ -0.07
CBWD3-203ENST00000377344 APBA2Q99767 749 aa14.62□□□□□ -0.07
CBWD3-203ENST00000377344 RAB34Q9BZG1 259 aa14.62□□□□□ -0.07
CBWD3-203ENST00000377344 DDX39AO00148 427 aaKnown RBP14.62□□□□□ -0.07
CBWD3-203ENST00000377344 GAS7O60861 476 aa14.62□□□□□ -0.07
CBWD3-203ENST00000377344 FKTNO75072 461 aa14.62□□□□□ -0.07
CBWD3-203ENST00000377344 LONP1P36776 959 aaKnown RBP14.62□□□□□ -0.07
CBWD3-203ENST00000377344 PRKCZQ05513 592 aa14.62□□□□□ -0.07
CBWD3-203ENST00000377344 DNAJC5GQ8N7S2 189 aa14.62□□□□□ -0.07
CBWD3-203ENST00000377344 ZNF296Q8WUU4 475 aaPredicted RBP14.62□□□□□ -0.07
CBWD3-203ENST00000377344 USP6NLQ92738 828 aa14.62□□□□□ -0.07
CBWD3-203ENST00000377344 TINF2Q9BSI4 451 aa14.62□□□□□ -0.07
CBWD3-203ENST00000377344 AGO4Q9HCK5 861 aaKnown RBP14.62□□□□□ -0.07
CBWD3-203ENST00000377344 GABRQQ9UN88 632 aa14.62□□□□□ -0.07
CBWD3-203ENST00000377344 DOCK3Q8IZD9 2030 aa14.61□□□□□ -0.07
CBWD3-203ENST00000377344 MAFGO15525 162 aa14.61□□□□□ -0.07
CBWD3-203ENST00000377344 HOXC6P09630 235 aa14.61□□□□□ -0.07
CBWD3-203ENST00000377344 FLT3LGP49771 235 aa14.61□□□□□ -0.07
CBWD3-203ENST00000377344 CCL14Q16627 93 aa14.61□□□□□ -0.07
CBWD3-203ENST00000377344 SHC4Q6S5L8 630 aa14.61□□□□□ -0.07
CBWD3-203ENST00000377344 FSIP1Q8NA03 581 aa14.61□□□□□ -0.07
CBWD3-203ENST00000377344 ZNF579Q8NAF0 562 aaKnown RBP14.61□□□□□ -0.07
CBWD3-203ENST00000377344 MORC4Q8TE76 937 aa14.61□□□□□ -0.07
CBWD3-203ENST00000377344 MRPS27Q92552 414 aaKnown RBP14.61□□□□□ -0.07
CBWD3-203ENST00000377344 SLC5A5Q92911 643 aa14.61□□□□□ -0.07
CBWD3-203ENST00000377344 ERO1AQ96HE7 468 aa14.61□□□□□ -0.07
CBWD3-203ENST00000377344 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.61□□□□□ -0.07
CBWD3-203ENST00000377344 LRWD1Q9UFC0 647 aa14.61□□□□□ -0.07
CBWD3-203ENST00000377344 A0A1B0GVL5 298 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 A0A1W2PQ27 194 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 A0A1W2PQ64 194 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 A0A1W2PQD8 194 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 POTEMA6NI47 508 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 PP2D1A8MPX8 630 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 CHMP2AO43633 222 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 ATP9AO75110 1047 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 HOXD10P28358 340 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 CDC25AP30304 524 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 FXR2P51116 673 aaKnown RBP eCLIP14.6□□□□□ -0.07
CBWD3-203ENST00000377344 CAP1Q01518 475 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 NCAPH2Q6IBW4 605 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 MAMDC4Q6UXC1 1216 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 SYMPKQ92797 1274 aaKnown RBP14.6□□□□□ -0.07
CBWD3-203ENST00000377344 EPSTI1Q96J88 318 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 TEKT3Q9BXF9 490 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 WBP1LQ9NX94 342 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 FAM13BQ9NYF5 915 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 FLRT1Q9NZU1 646 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 LRRC37A2A6NM11 1700 aa14.6□□□□□ -0.07
CBWD3-203ENST00000377344 SYNGAP1Q96PV0 1343 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 MCM3APO60318 1980 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 SPATA31C2B4DYI2 1134 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 SORBS3O60504 671 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 SNAI1O95863 264 aaPredicted RBP14.59□□□□□ -0.07
CBWD3-203ENST00000377344 CMA1P23946 247 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 SEMA3FQ13275 785 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 ITGB3BPQ13352 177 aaPredicted RBP14.59□□□□□ -0.07
CBWD3-203ENST00000377344 ARHGEF6Q15052 776 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 ZRSR1Q15695 479 aaKnown RBP14.59□□□□□ -0.07
CBWD3-203ENST00000377344 RESP18Q5W5W9 173 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 CCDC73Q6ZRK6 1079 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 USP49Q70CQ1 688 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 MSL3Q8N5Y2 521 aaKnown RBP14.59□□□□□ -0.07
CBWD3-203ENST00000377344 IGSF22Q8N9C0 903 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 RASSF8Q8NHQ8 419 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 RIT2Q99578 217 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 SDF4Q9BRK5 362 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 GOLPH3LQ9H4A5 285 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 TBC1D22BQ9NU19 505 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 TCEAL9Q9UHQ7 104 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 PSMD10O75832 226 aa14.59□□□□□ -0.07
CBWD3-203ENST00000377344 PFKFB1P16118 471 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms