RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 TPRNQ4KMQ1 711 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 TYW1BQ6NUM6 668 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 LUZP1Q86V48 1076 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 CKAP2LQ8IYA6 745 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 CTCFLQ8NI51 663 aaPredicted RBP14.07□□□□□ -0.16
VRK3-202ENST00000377011 COPS5Q92905 334 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 ZNF830Q96NB3 372 aaPredicted RBP14.07□□□□□ -0.16
VRK3-202ENST00000377011 ABHD16BQ9H3Z7 469 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 TRIOBPQ9H2D6 2365 aa14.06□□□□□ -0.16
VRK3-202ENST00000377011 CNTNAP5Q8WYK1 1306 aa14.06□□□□□ -0.16
VRK3-202ENST00000377011 PNMA6FA0A0J9YX94 578 aa14.06□□□□□ -0.16
VRK3-202ENST00000377011 A0A1W2PQ27 194 aa14.06□□□□□ -0.16
VRK3-202ENST00000377011 A0A1W2PQ64 194 aa14.06□□□□□ -0.16
VRK3-202ENST00000377011 A0A1W2PQD8 194 aa14.06□□□□□ -0.16
VRK3-202ENST00000377011 NEMFO60524 1076 aa14.06□□□□□ -0.16
VRK3-202ENST00000377011 RARBP10826 455 aa14.06□□□□□ -0.16
VRK3-202ENST00000377011 HSD17B4P51659 736 aa14.06□□□□□ -0.16
VRK3-202ENST00000377011 FAM160A1Q05DH4 1040 aa14.06□□□□□ -0.16
VRK3-202ENST00000377011 CCSAPQ6IQ19 270 aaPredicted RBP14.06□□□□□ -0.16
VRK3-202ENST00000377011 GPKOWQ92917 476 aaPredicted RBP eCLIP14.06□□□□□ -0.16
VRK3-202ENST00000377011 MAP3K14Q99558 947 aa14.06□□□□□ -0.16
VRK3-202ENST00000377011 SPZ1Q9BXG8 430 aa14.06□□□□□ -0.16
VRK3-202ENST00000377011 NRBP1Q9UHY1 535 aa14.06□□□□□ -0.16
VRK3-202ENST00000377011 FAM184BQ9ULE4 1060 aa14.06□□□□□ -0.16
VRK3-202ENST00000377011 GNEQ9Y223 722 aaKnown RBP14.06□□□□□ -0.16
VRK3-202ENST00000377011 DNM1LO00429 736 aa14.05□□□□□ -0.16
VRK3-202ENST00000377011 MSCO60682 206 aa14.05□□□□□ -0.16
VRK3-202ENST00000377011 EIF2AK2P19525 551 aaKnown RBP14.05□□□□□ -0.16
VRK3-202ENST00000377011 C7orf61Q8IZ16 206 aa14.05□□□□□ -0.16
VRK3-202ENST00000377011 KLHDC9Q8NEP7 349 aa14.05□□□□□ -0.16
VRK3-202ENST00000377011 MRFAP1L1Q96HT8 127 aa14.05□□□□□ -0.16
VRK3-202ENST00000377011 RTEL1Q9NZ71 1219 aa14.05□□□□□ -0.16
VRK3-202ENST00000377011 ASB14A6NK59 587 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 KINO60870 393 aaKnown RBP14.04□□□□□ -0.16
VRK3-202ENST00000377011 SYN1P17600 705 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 HOXD11P31277 338 aaPredicted RBP14.04□□□□□ -0.16
VRK3-202ENST00000377011 USP17L6PQ6QN14 398 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 BRAPQ7Z569 592 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 TMTC2Q8N394 836 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 ENGASEQ8NFI3 743 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 PPP1R13LQ8WUF5 828 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 ZMYND15Q9H091 742 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 NCOA5Q9HCD5 579 aaKnown RBP14.04□□□□□ -0.16
VRK3-202ENST00000377011 ANO10Q9NW15 660 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 ZMYND8Q9ULU4 1186 aaPredicted RBP14.04□□□□□ -0.16
VRK3-202ENST00000377011 MRPL11Q9Y3B7 192 aaKnown RBP14.04□□□□□ -0.16
VRK3-202ENST00000377011 GOLGA6L19H0YKK7 550 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 ZBTB43O43298 467 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 DUSP11O75319 330 aaKnown RBP14.04□□□□□ -0.16
VRK3-202ENST00000377011 RGS20O76081 388 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 YEATS4O95619 227 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 GHRHRQ02643 423 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 TNFAIP2Q03169 654 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 IQCB1Q15051 598 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 KCNA10Q16322 511 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 PRPF38BQ5VTL8 546 aaKnown RBP14.04□□□□□ -0.16
VRK3-202ENST00000377011 USP28Q96RU2 1077 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 RMDN3Q96TC7 470 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 TRIM5Q9C035 493 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 NAP1L2Q9ULW6 460 aaPredicted RBP14.04□□□□□ -0.16
VRK3-202ENST00000377011 PYCARDQ9ULZ3 195 aa14.04□□□□□ -0.16
VRK3-202ENST00000377011 KIAA1217Q5T5P2 1943 aa14.03□□□□□ -0.16
VRK3-202ENST00000377011 GOLGA8AA7E2F4 631 aa14.03□□□□□ -0.16
VRK3-202ENST00000377011 GOLGA8BA8MQT2 603 aa14.03□□□□□ -0.16
VRK3-202ENST00000377011 C6orf222P0C671 652 aaPredicted RBP14.03□□□□□ -0.16
VRK3-202ENST00000377011 SNW1Q13573 536 aaKnown RBP14.03□□□□□ -0.16
VRK3-202ENST00000377011 DHX8Q14562 1220 aaKnown RBP14.03□□□□□ -0.16
VRK3-202ENST00000377011 RTN1Q16799 776 aa14.03□□□□□ -0.16
VRK3-202ENST00000377011 ADALQ6DHV7 355 aa14.03□□□□□ -0.16
VRK3-202ENST00000377011 FCHSD1Q86WN1 690 aa14.03□□□□□ -0.16
VRK3-202ENST00000377011 KCNG4Q8TDN1 519 aa14.03□□□□□ -0.16
VRK3-202ENST00000377011 NAT10Q9H0A0 1025 aaKnown RBP14.03□□□□□ -0.16
VRK3-202ENST00000377011 DNAJC25Q9H1X3 360 aa14.03□□□□□ -0.16
VRK3-202ENST00000377011 BCAS3Q9H6U6 928 aa14.03□□□□□ -0.16
VRK3-202ENST00000377011 PXMP2Q9NR77 195 aa14.03□□□□□ -0.16
VRK3-202ENST00000377011 POLR3EQ9NVU0 708 aa14.03□□□□□ -0.16
VRK3-202ENST00000377011 MEIS2O14770 477 aa14.02□□□□□ -0.16
VRK3-202ENST00000377011 DYNC1LI2O43237 492 aaPredicted RBP14.02□□□□□ -0.16
VRK3-202ENST00000377011 EVI5O60447 810 aa14.02□□□□□ -0.16
VRK3-202ENST00000377011 KIF5BP33176 963 aa14.02□□□□□ -0.16
VRK3-202ENST00000377011 GJA9P57773 515 aa14.02□□□□□ -0.16
VRK3-202ENST00000377011 CCT2P78371 535 aaKnown RBP14.02□□□□□ -0.16
VRK3-202ENST00000377011 UBE2SQ16763 222 aa14.02□□□□□ -0.16
VRK3-202ENST00000377011 WWC2Q6AWC2 1192 aa14.02□□□□□ -0.16
VRK3-202ENST00000377011 SPC24Q8NBT2 197 aa14.02□□□□□ -0.16
VRK3-202ENST00000377011 ARRDC4Q8NCT1 418 aa14.02□□□□□ -0.16
VRK3-202ENST00000377011 MRPS27Q92552 414 aaKnown RBP14.02□□□□□ -0.16
VRK3-202ENST00000377011 RRP36Q96EU6 259 aaKnown RBP14.02□□□□□ -0.16
VRK3-202ENST00000377011 UPF3AQ9H1J1 476 aaKnown RBP14.02□□□□□ -0.16
VRK3-202ENST00000377011 ADD3Q9UEY8 706 aaKnown RBP14.02□□□□□ -0.16
VRK3-202ENST00000377011 PHF24Q9UPV7 400 aa14.02□□□□□ -0.16
VRK3-202ENST00000377011 TELO2Q9Y4R8 837 aa14.02□□□□□ -0.16
VRK3-202ENST00000377011 V9GY48 417 aaPredicted RBP14.02□□□□□ -0.16
VRK3-202ENST00000377011 A0A1W2PQ45 241 aaPredicted RBP14.01□□□□□ -0.17
VRK3-202ENST00000377011 A0A1W2PQY0 241 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 RBM47A0AV96 593 aaKnown RBP14.01□□□□□ -0.17
VRK3-202ENST00000377011 SORBS3O60504 671 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 CALM1P0DP23 149 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 CALM2P0DP24 149 aa14.01□□□□□ -0.17
VRK3-202ENST00000377011 CALM3P0DP25 149 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms