RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 TOM1L1O75674 476 aa9.03□□□□□ -0.96
HSPG2-203ENST00000374695 DEPDC1BQ8WUY9 529 aa9.03□□□□□ -0.96
HSPG2-203ENST00000374695 ANKRD36BP1Q96IX9 119 aa9.03□□□□□ -0.96
HSPG2-203ENST00000374695 ACEP12821 1306 aa9.03□□□□□ -0.96
HSPG2-203ENST00000374695 USH1GQ495M9 461 aa9.03□□□□□ -0.96
HSPG2-203ENST00000374695 SGO2Q562F6 1265 aa9.03□□□□□ -0.96
HSPG2-203ENST00000374695 SPDYE1Q8NFV5 336 aaPredicted RBP9.03□□□□□ -0.96
HSPG2-203ENST00000374695 SPTLC3Q9NUV7 552 aa9.03□□□□□ -0.96
HSPG2-203ENST00000374695 CFAP73A6NFT4 308 aa9.03□□□□□ -0.96
HSPG2-203ENST00000374695 ESRRAP11474 423 aaPredicted RBP9.03□□□□□ -0.96
HSPG2-203ENST00000374695 CRYMQ14894 314 aa9.03□□□□□ -0.96
HSPG2-203ENST00000374695 FAM160B1Q5W0V3 765 aa9.03□□□□□ -0.96
HSPG2-203ENST00000374695 DCLK2Q8N568 766 aa9.03□□□□□ -0.96
HSPG2-203ENST00000374695 OPTNQ96CV9 577 aa9.03□□□□□ -0.96
HSPG2-203ENST00000374695 SBNO1A3KN83 1393 aa9.03□□□□□ -0.96
HSPG2-203ENST00000374695 SCG2P13521 617 aa9.03□□□□□ -0.96
HSPG2-203ENST00000374695 MDM2Q00987 491 aaPredicted RBP9.03□□□□□ -0.96
HSPG2-203ENST00000374695 ZNF280CQ8ND82 737 aa9.03□□□□□ -0.96
HSPG2-203ENST00000374695 ZNF263O14978 683 aa9.02□□□□□ -0.96
HSPG2-203ENST00000374695 UFL1O94874 794 aa9.02□□□□□ -0.96
HSPG2-203ENST00000374695 PLS3P13797 630 aa9.02□□□□□ -0.96
HSPG2-203ENST00000374695 PFKFB1P16118 471 aa9.02□□□□□ -0.96
HSPG2-203ENST00000374695 PGBD1Q96JS3 809 aa9.02□□□□□ -0.96
HSPG2-203ENST00000374695 NSFL1CQ9UNZ2 370 aaKnown RBP9.02□□□□□ -0.96
HSPG2-203ENST00000374695 SLC8A2Q9UPR5 921 aa9.02□□□□□ -0.96
HSPG2-203ENST00000374695 HIBADHP31937 336 aaKnown RBP9.02□□□□□ -0.96
HSPG2-203ENST00000374695 IFRD2Q12894 506 aaPredicted RBP9.02□□□□□ -0.96
HSPG2-203ENST00000374695 MTRQ99707 1265 aa9.02□□□□□ -0.96
HSPG2-203ENST00000374695 TADA3O75528 432 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 MT-ND3P03897 115 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 MAPK4P31152 587 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 DHX9Q08211 1270 aaKnown RBP9.02□□□□□ -0.97
HSPG2-203ENST00000374695 CENPUQ71F23 418 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 ZNF713Q8N859 430 aaPredicted RBP9.02□□□□□ -0.97
HSPG2-203ENST00000374695 DBNLQ9UJU6 430 aaKnown RBP9.02□□□□□ -0.97
HSPG2-203ENST00000374695 GGA1Q9UJY5 639 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 PCDHB4Q9Y5E5 795 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 FAM95CA0A1B0GW59 222 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 STAT2P52630 851 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 DYMQ7RTS9 669 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 DNAAF3Q8N9W5 541 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 DACH2Q96NX9 599 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 PCDHA12Q9UN75 941 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 SH3TC1Q8TE82 1336 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 KHDRBS2Q5VWX1 349 aaKnown RBP9.02□□□□□ -0.97
HSPG2-203ENST00000374695 SPOPLQ6IQ16 392 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 PARD3BQ8TEW8 1205 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 STAMBPL1Q96FJ0 436 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 NAF1Q96HR8 494 aaKnown RBP9.02□□□□□ -0.97
HSPG2-203ENST00000374695 MRPL11Q9Y3B7 192 aaKnown RBP9.02□□□□□ -0.97
HSPG2-203ENST00000374695 NBPF20Q3BBV1 942 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 PANX2Q96RD6 677 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 A0A1W2PQ27 194 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 A0A1W2PQ64 194 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 A0A1W2PQD8 194 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 TRAPPC10P48553 1259 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 THOC5Q13769 683 aaKnown RBP9.02□□□□□ -0.97
HSPG2-203ENST00000374695 FRA10AC1Q70Z53 315 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 PATL1Q86TB9 770 aaKnown RBP9.02□□□□□ -0.97
HSPG2-203ENST00000374695 ZNF274Q96GC6 653 aaPredicted RBP9.02□□□□□ -0.97
HSPG2-203ENST00000374695 DPH5Q9H2P9 285 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 SHANK2Q9UPX8 1470 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 MYH13Q9UKX3 1938 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 ARL13BQ3SXY8 428 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 EPAS1Q99814 870 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 AS3MTQ9HBK9 375 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 BUB1O43683 1085 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 MAEAQ7L5Y9 396 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 KCTD6Q8NC69 237 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 SEPT3Q9UH03 358 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 KDM1AO60341 852 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 E2F5Q15329 346 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 BLIDQ8IZY5 108 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 VPS39Q96JC1 886 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 EYA2O00167 538 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 TLR3O15455 904 aaKnown RBP9.02□□□□□ -0.97
HSPG2-203ENST00000374695 SURF1Q15526 300 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 UBN1Q9NPG3 1134 aa9.02□□□□□ -0.97
HSPG2-203ENST00000374695 ZNF215Q9UL58 517 aaPredicted RBP9.02□□□□□ -0.97
HSPG2-203ENST00000374695 YWHAHQ04917 246 aaPredicted RBP9.01□□□□□ -0.97
HSPG2-203ENST00000374695 PLBD2Q8NHP8 589 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 METTL22Q9BUU2 404 aaPredicted RBP9.01□□□□□ -0.97
HSPG2-203ENST00000374695 EDEM3Q9BZQ6 932 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 GCNT4Q9P109 453 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 ATP8A1Q9Y2Q0 1164 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 ARL4AP40617 200 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 SF3A3Q12874 501 aaKnown RBP eCLIP9.01□□□□□ -0.971e-6■■■■■ 35.6
HSPG2-203ENST00000374695 COL17A1Q9UMD9 1497 aaPredicted RBP9.01□□□□□ -0.97
HSPG2-203ENST00000374695 H0Y626 953 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 TRIM16O95361 564 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 COPB1P53618 953 aaKnown RBP9.01□□□□□ -0.97
HSPG2-203ENST00000374695 GPBP1L1Q9HC44 474 aaPredicted RBP9.01□□□□□ -0.97
HSPG2-203ENST00000374695 CLASP1Q7Z460 1538 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 PYGMP11217 842 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 NNTQ13423 1086 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 KCTD16Q68DU8 428 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 SPATA5Q8NB90 893 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 KLC2Q9H0B6 622 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 UHRF1BP1LA0JNW5 1464 aa9.01□□□□□ -0.97
HSPG2-203ENST00000374695 SMCO2A6NFE2 343 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms