RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 DEPDC1Q5TB30 811 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 TRIM69Q86WT6 500 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 ANKRD7Q92527 254 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 SKA1Q96BD8 255 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 NR1H4Q96RI1 486 aaPredicted RBP7.58□□□□□ -1.2
CSMD2-206ENST00000373388 ZNF277Q9NRM2 450 aaPredicted RBP7.58□□□□□ -1.2
CSMD2-206ENST00000373388 ADGRA3Q8IWK6 1321 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 SMARCA1P28370 1054 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 GGCXP38435 758 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 ROR2Q01974 943 aaKnown RBP7.58□□□□□ -1.2
CSMD2-206ENST00000373388 PDZD4Q76G19 769 aaPredicted RBP7.58□□□□□ -1.2
CSMD2-206ENST00000373388 EPB41L5Q9HCM4 733 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 RNF103-CHMP3A0A140T963 221 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 KPNA4O00629 521 aaPredicted RBP7.58□□□□□ -1.2
CSMD2-206ENST00000373388 TRIM66O15016 1216 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 ECEL1O95672 775 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 PDCLQ13371 301 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 ITFG2Q969R8 447 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 PTPN23Q9H3S7 1636 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 HAUS5O94927 633 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 TAB1Q15750 504 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 ATP8A1Q9Y2Q0 1164 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 GOLGA8MH3BSY2 632 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 ATP8B2P98198 1209 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 LRRC39Q96DD0 335 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 PSMB7Q99436 277 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 RAB20Q9NX57 234 aa7.58□□□□□ -1.2
CSMD2-206ENST00000373388 COG1Q8WTW3 980 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 CCT7Q99832 543 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 BEGAINQ9BUH8 593 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 SNRKQ9NRH2 765 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 XRCC5P13010 732 aaKnown RBP7.57□□□□□ -1.2
CSMD2-206ENST00000373388 PECAM1P16284 738 aaPredicted RBP7.57□□□□□ -1.2
CSMD2-206ENST00000373388 HOXC8P31273 242 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 ADKP55263 362 aaKnown RBP7.57□□□□□ -1.2
CSMD2-206ENST00000373388 LRCH1Q9Y2L9 728 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 MTTPP55157 894 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 TRMT44Q8IYL2 757 aaKnown RBP7.57□□□□□ -1.2
CSMD2-206ENST00000373388 APOL4Q9BPW4 351 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 DNAJC12Q9UKB3 198 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 TRIM17Q9Y577 477 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 PODXLO00592 558 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 BAG3O95817 575 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 MARK3P27448 753 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 CDC27P30260 824 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 TMEM245Q9H330 911 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 FAM107AO95990 144 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 ANKRD44Q8N8A2 993 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 RTL3Q8N8U3 475 aaKnown RBP7.57□□□□□ -1.2
CSMD2-206ENST00000373388 SYNGAP1Q96PV0 1343 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 IL10P22301 178 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 HNRNPH1P31943 449 aaKnown RBP7.57□□□□□ -1.2
CSMD2-206ENST00000373388 VPS16Q9H269 839 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 ABCB6Q9NP58 842 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 KIF17Q9P2E2 1029 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 CHMP2BQ9UQN3 213 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 GOLGA8RI6L899 631 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 ABLIM1O14639 778 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 CLASP2O75122 1294 aaKnown RBP7.57□□□□□ -1.2
CSMD2-206ENST00000373388 SERPINB8P50452 374 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 PPARDQ03181 441 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 KCNG1Q9UIX4 513 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 MYH8P13535 1937 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 AXIN1O15169 862 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 DEXIO95424 95 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 CA4P22748 312 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 FBXW10Q5XX13 1052 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 ELMSAN1Q6PJG2 1045 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 RRAGAQ7L523 313 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 LRRC49Q8IUZ0 686 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 FHDC1Q9C0D6 1143 aaPredicted RBP7.57□□□□□ -1.2
CSMD2-206ENST00000373388 GRID2IPA4D2P6 1211 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 TOMM70O94826 608 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 MYL1P05976 194 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 IFIT5Q13325 482 aaKnown RBP7.57□□□□□ -1.2
CSMD2-206ENST00000373388 ADCK5Q3MIX3 580 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 TGS1Q96RS0 853 aaKnown RBP7.57□□□□□ -1.2
CSMD2-206ENST00000373388 VAT1LQ9HCJ6 419 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 R3HDM2Q9Y2K5 976 aaKnown RBP7.57□□□□□ -1.2
CSMD2-206ENST00000373388 PRG3Q9Y2Y8 225 aaPredicted RBP7.57□□□□□ -1.2
CSMD2-206ENST00000373388 LCA5LO95447 670 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 GSNP06396 782 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 SNAP25P60880 206 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 MAPRE2Q15555 327 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 PCNX4Q63HM2 1172 aa7.57□□□□□ -1.2
CSMD2-206ENST00000373388 LIN7AO14910 233 aaPredicted RBP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 DLGAP3O95886 979 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 KRT16P08779 473 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 SOX6P35712 828 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 MORC3Q14149 939 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 CREB3L3Q68CJ9 461 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 C6orf203Q9P0P8 240 aaPredicted RBP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 PRELID1Q9Y255 219 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 HSPA1AP0DMV8 641 aaKnown RBP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 HSPA1BP0DMV9 641 aaKnown RBP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 ZCWPW2Q504Y3 356 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 FAM83GA6ND36 823 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 MTRF1O75570 445 aaKnown RBP7.56□□□□□ -1.2
CSMD2-206ENST00000373388 PPP1R37O75864 691 aa7.56□□□□□ -1.2
CSMD2-206ENST00000373388 TRIM49P0CI25 452 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms