RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 CARMIL3Q8ND23 1372 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 MYO5CQ9NQX4 1742 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 E9PMD0 336 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 PFKFB2O60825 505 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 EFCAB14O75071 495 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 LMNAP02545 664 aaKnown RBP13.46□□□□□ -0.25
HCFC1-202ENST00000369984 ALAS1P13196 640 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 RANBP1P43487 201 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 SLCO1A2P46721 670 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 C10orf76Q5T2E6 689 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 SUPT20HQ8NEM7 779 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 SPDYE1Q8NFV5 336 aaPredicted RBP13.46□□□□□ -0.25
HCFC1-202ENST00000369984 USP17L12C9JPN9 530 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 USP17L21D6R901 530 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 HNRNPDLO14979 420 aaKnown RBP13.46□□□□□ -0.25
HCFC1-202ENST00000369984 XPAP23025 273 aaPredicted RBP13.46□□□□□ -0.25
HCFC1-202ENST00000369984 NR2F2P24468 414 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 KPNA2P52292 529 aaKnown RBP13.46□□□□□ -0.25
HCFC1-202ENST00000369984 ODR4Q5SWX8 454 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 PPP4R4Q6NUP7 873 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 NIM1KQ8IY84 436 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 UBAP1LF5GYI3 381 aa13.46□□□□□ -0.26
HCFC1-202ENST00000369984 BASP1P80723 227 aaKnown RBP13.46□□□□□ -0.26
HCFC1-202ENST00000369984 PCGF5Q86SE9 256 aa13.46□□□□□ -0.26
HCFC1-202ENST00000369984 KIAA2013Q8IYS2 634 aa13.46□□□□□ -0.26
HCFC1-202ENST00000369984 SLC24A3Q9HC58 644 aa13.46□□□□□ -0.26
HCFC1-202ENST00000369984 GTPBP10A4D1E9 387 aaKnown RBP13.46□□□□□ -0.26
HCFC1-202ENST00000369984 GUCY2CP25092 1073 aa13.46□□□□□ -0.26
HCFC1-202ENST00000369984 BRD2P25440 801 aaKnown RBP13.46□□□□□ -0.26
HCFC1-202ENST00000369984 ALDH1B1P30837 517 aa13.46□□□□□ -0.26
HCFC1-202ENST00000369984 PSMC2P35998 433 aaKnown RBP13.46□□□□□ -0.26
HCFC1-202ENST00000369984 SLC7A5Q01650 507 aa13.46□□□□□ -0.26
HCFC1-202ENST00000369984 FBXO11Q86XK2 927 aa13.46□□□□□ -0.26
HCFC1-202ENST00000369984 PBKQ96KB5 322 aa13.46□□□□□ -0.26
HCFC1-202ENST00000369984 CSADQ9Y600 493 aa13.46□□□□□ -0.26
HCFC1-202ENST00000369984 RGS12O14924 1447 aa13.46□□□□□ -0.26
HCFC1-202ENST00000369984 POTEB3A0JP26 581 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 ATP8B1O43520 1251 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 SCRN1Q12765 414 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 TCIRG1Q13488 830 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 E2F4Q16254 413 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 POTEBQ6S5H4 581 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 PNMA2Q9UL42 364 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 A0A0D9SFI3 127 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 DLGAP5Q15398 846 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 CERKLQ49MI3 558 aaPredicted RBP13.45□□□□□ -0.26
HCFC1-202ENST00000369984 ZC3H18Q86VM9 953 aaKnown RBP13.45□□□□□ -0.26
HCFC1-202ENST00000369984 BBS5Q8N3I7 341 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 HOXB7P09629 217 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 IGBP1P78318 339 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 ZSWIM6Q9HCJ5 1215 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 DNMT1P26358 1616 aaKnown RBP13.45□□□□□ -0.26
HCFC1-202ENST00000369984 EDC4Q6P2E9 1401 aaKnown RBP13.45□□□□□ -0.26
HCFC1-202ENST00000369984 ZNF518AQ6AHZ1 1483 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 LAD1O00515 517 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 DDAH1O94760 285 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 AFPP02771 609 aaKnown RBP13.45□□□□□ -0.26
HCFC1-202ENST00000369984 GOLGA8FQ08AF8 430 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 GOLGA8DPQ0D2H9 430 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 FOXD4Q12950 439 aaPredicted RBP13.45□□□□□ -0.26
HCFC1-202ENST00000369984 ALS2CLQ60I27 953 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 ZNF449Q6P9G9 518 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 CYTH2Q99418 400 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 CAPN11Q9UMQ6 739 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 MT-ND3P03897 115 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 NNTQ13423 1086 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 KIF19Q2TAC6 998 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 EP400NLQ6ZTU2 488 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 NT5C1BQ96P26 610 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 UPF3AQ9H1J1 476 aaKnown RBP13.45□□□□□ -0.26
HCFC1-202ENST00000369984 CPSF3Q9UKF6 684 aaKnown RBP13.45□□□□□ -0.26
HCFC1-202ENST00000369984 CFLARO15519 480 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 ESRRAP11474 423 aaPredicted RBP13.45□□□□□ -0.26
HCFC1-202ENST00000369984 GLE1Q53GS7 698 aaKnown RBP13.45□□□□□ -0.26
HCFC1-202ENST00000369984 ACTR5Q9H9F9 607 aaPredicted RBP13.45□□□□□ -0.26
HCFC1-202ENST00000369984 MOCS3O95396 460 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 PTH1RQ03431 593 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 FAM160B1Q5W0V3 765 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 ANGPTL8Q6UXH0 198 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 GADL1Q6ZQY3 521 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 PLA2G4DQ86XP0 818 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 SLC13A4Q9UKG4 626 aa13.45□□□□□ -0.26
HCFC1-202ENST00000369984 NEURL1BA8MQ27 555 aa13.44□□□□□ -0.26
HCFC1-202ENST00000369984 PMLP29590 882 aa13.44□□□□□ -0.26
HCFC1-202ENST00000369984 CYP4A11Q02928 519 aa13.44□□□□□ -0.26
HCFC1-202ENST00000369984 DHX9Q08211 1270 aaKnown RBP13.44□□□□□ -0.26
HCFC1-202ENST00000369984 SMYD4Q8IYR2 804 aaPredicted RBP13.44□□□□□ -0.26
HCFC1-202ENST00000369984 FLCNQ8NFG4 579 aa13.44□□□□□ -0.26
HCFC1-202ENST00000369984 ADD1P35611 737 aaKnown RBP13.44□□□□□ -0.26
HCFC1-202ENST00000369984 OCRLQ01968 901 aa13.44□□□□□ -0.26
HCFC1-202ENST00000369984 ZMYND12Q9H0C1 365 aa13.44□□□□□ -0.26
HCFC1-202ENST00000369984 AKT3Q9Y243 479 aa13.44□□□□□ -0.26
HCFC1-202ENST00000369984 COL17A1Q9UMD9 1497 aaPredicted RBP13.44□□□□□ -0.26
HCFC1-202ENST00000369984 FAM135BQ49AJ0 1406 aa13.44□□□□□ -0.26
HCFC1-202ENST00000369984 hCG_2014768A0A024R1R8 64 aa13.44□□□□□ -0.26
HCFC1-202ENST00000369984 NR1D1P20393 614 aa13.44□□□□□ -0.26
HCFC1-202ENST00000369984 GRAMD1BQ3KR37 738 aa13.44□□□□□ -0.26
HCFC1-202ENST00000369984 SPOPLQ6IQ16 392 aa13.44□□□□□ -0.26
HCFC1-202ENST00000369984 APOL6Q9BWW8 343 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms