RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 LMAN2LQ9H0V9 348 aa17.36■□□□□ 0.37
VAMP4-202ENST00000367740 ZNF292O60281 2723 aa17.36■□□□□ 0.37
VAMP4-202ENST00000367740 KMT2BQ9UMN6 2715 aaPredicted RBP17.35■□□□□ 0.37
VAMP4-202ENST00000367740 MYH7BA7E2Y1 1941 aa17.35■□□□□ 0.37
VAMP4-202ENST00000367740 UPP2O95045 317 aa17.35■□□□□ 0.37
VAMP4-202ENST00000367740 ID4P47928 161 aa17.35■□□□□ 0.37
VAMP4-202ENST00000367740 PSEN2P49810 448 aa17.35■□□□□ 0.37
VAMP4-202ENST00000367740 RPS6P62753 249 aaKnown RBP17.35■□□□□ 0.37
VAMP4-202ENST00000367740 ZNF200P98182 395 aaPredicted RBP17.35■□□□□ 0.37
VAMP4-202ENST00000367740 HIC1Q14526 733 aa17.35■□□□□ 0.37
VAMP4-202ENST00000367740 RNF207Q6ZRF8 634 aa17.35■□□□□ 0.37
VAMP4-202ENST00000367740 MPHOSPH6Q99547 160 aaKnown RBP17.35■□□□□ 0.37
VAMP4-202ENST00000367740 ALG1Q9BT22 464 aa17.35■□□□□ 0.37
VAMP4-202ENST00000367740 BCL11AQ9H165 835 aa17.35■□□□□ 0.37
VAMP4-202ENST00000367740 IGFLR1Q9H665 355 aa17.35■□□□□ 0.37
VAMP4-202ENST00000367740 TRPC6Q9Y210 931 aa17.35■□□□□ 0.37
VAMP4-202ENST00000367740 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.34■□□□□ 0.37
VAMP4-202ENST00000367740 HAS3O00219 553 aa17.34■□□□□ 0.37
VAMP4-202ENST00000367740 RGS20O76081 388 aa17.34■□□□□ 0.37
VAMP4-202ENST00000367740 F2P00734 622 aa17.34■□□□□ 0.37
VAMP4-202ENST00000367740 GH1P01241 217 aa17.34■□□□□ 0.37
VAMP4-202ENST00000367740 RLBP1P12271 317 aa17.34■□□□□ 0.37
VAMP4-202ENST00000367740 CASTP20810 708 aaKnown RBP17.34■□□□□ 0.37
VAMP4-202ENST00000367740 TDO2P48775 406 aa17.34■□□□□ 0.37
VAMP4-202ENST00000367740 FXR2P51116 673 aaKnown RBP eCLIP17.34■□□□□ 0.37
VAMP4-202ENST00000367740 TFAP4Q01664 338 aa17.34■□□□□ 0.37
VAMP4-202ENST00000367740 ADAM15Q13444 863 aa17.34■□□□□ 0.37
VAMP4-202ENST00000367740 LY6KQ17RY6 165 aa17.34■□□□□ 0.37
VAMP4-202ENST00000367740 SMRP1Q8NCR6 262 aa17.34■□□□□ 0.37
VAMP4-202ENST00000367740 DNERQ8NFT8 737 aa17.34■□□□□ 0.37
VAMP4-202ENST00000367740 C11orf84Q9BUA3 381 aaPredicted RBP17.34■□□□□ 0.37
VAMP4-202ENST00000367740 RSPH10B2B2RC85 870 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 CSPG5O95196 566 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 RSPH10BP0C881 870 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 ZNF286BP0CG31 522 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 SLC16A2P36021 539 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 NBL1P41271 181 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 NDUFV1P49821 464 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 MFSD10Q14728 455 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 DGKDQ16760 1214 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 KIAA0753Q2KHM9 967 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 TTBK2Q6IQ55 1244 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 CHST3Q7LGC8 479 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 OSBP2Q969R2 916 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 KATNAL1Q9BW62 490 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 IFIH1Q9BYX4 1025 aaKnown RBP17.33■□□□□ 0.36
VAMP4-202ENST00000367740 OSBPL7Q9BZF2 842 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 CLEC1BQ9P126 229 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 STX8Q9UNK0 236 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 EPG5Q9HCE0 2579 aa17.33■□□□□ 0.36
VAMP4-202ENST00000367740 GALR2O43603 387 aaPredicted RBP17.32■□□□□ 0.36
VAMP4-202ENST00000367740 KDM4AO75164 1064 aa17.32■□□□□ 0.36
VAMP4-202ENST00000367740 PDGFBP01127 241 aaPredicted RBP17.32■□□□□ 0.36
VAMP4-202ENST00000367740 MMP1P03956 469 aa17.32■□□□□ 0.36
VAMP4-202ENST00000367740 RB1P06400 928 aa17.32■□□□□ 0.36
VAMP4-202ENST00000367740 BMPR1AP36894 532 aa17.32■□□□□ 0.36
VAMP4-202ENST00000367740 RRP1P56182 461 aaKnown RBP17.32■□□□□ 0.36
VAMP4-202ENST00000367740 CCDC96Q2M329 555 aa17.32■□□□□ 0.36
VAMP4-202ENST00000367740 FTSJ3Q8IY81 847 aaKnown RBP17.32■□□□□ 0.36
VAMP4-202ENST00000367740 FIBCD1Q8N539 461 aa17.32■□□□□ 0.36
VAMP4-202ENST00000367740 INCENPQ9NQS7 918 aa17.32■□□□□ 0.36
VAMP4-202ENST00000367740 MTMR7Q9Y216 660 aa17.32■□□□□ 0.36
VAMP4-202ENST00000367740 ZNF316A6NFI3 1004 aaPredicted RBP17.31■□□□□ 0.36
VAMP4-202ENST00000367740 THPOP40225 353 aa17.31■□□□□ 0.36
VAMP4-202ENST00000367740 NUBP1P53384 320 aa17.31■□□□□ 0.36
VAMP4-202ENST00000367740 CAMK1Q14012 370 aa17.31■□□□□ 0.36
VAMP4-202ENST00000367740 SYDE2Q5VT97 1194 aa17.31■□□□□ 0.36
VAMP4-202ENST00000367740 BTNL9Q6UXG8 535 aa17.31■□□□□ 0.36
VAMP4-202ENST00000367740 SERINC5Q86VE9 423 aa17.31■□□□□ 0.36
VAMP4-202ENST00000367740 IL17RBQ9NRM6 502 aa17.31■□□□□ 0.36
VAMP4-202ENST00000367740 USP15Q9Y4E8 981 aaPredicted RBP17.31■□□□□ 0.36
VAMP4-202ENST00000367740 FRYLO94915 3013 aa17.31■□□□□ 0.36
VAMP4-202ENST00000367740 GPAA1O43292 621 aa17.3■□□□□ 0.36
VAMP4-202ENST00000367740 NMT2O60551 498 aa17.3■□□□□ 0.36
VAMP4-202ENST00000367740 COASYQ13057 564 aa17.3■□□□□ 0.36
VAMP4-202ENST00000367740 SEPT14Q6ZU15 432 aa17.3■□□□□ 0.36
VAMP4-202ENST00000367740 SEPT8Q92599 483 aa17.3■□□□□ 0.36
VAMP4-202ENST00000367740 IL17RAQ96F46 866 aa17.3■□□□□ 0.36
VAMP4-202ENST00000367740 RC3H2Q9HBD1 1191 aaKnown RBP17.3■□□□□ 0.36
VAMP4-202ENST00000367740 ADGRA3Q8IWK6 1321 aa17.29■□□□□ 0.36
VAMP4-202ENST00000367740 ICAM3P32942 547 aa17.29■□□□□ 0.36
VAMP4-202ENST00000367740 PTPN21Q16825 1174 aa17.29■□□□□ 0.36
VAMP4-202ENST00000367740 PPP4R3BQ5MIZ7 849 aa17.29■□□□□ 0.36
VAMP4-202ENST00000367740 ADGRD2Q7Z7M1 963 aa17.29■□□□□ 0.36
VAMP4-202ENST00000367740 DHX37Q8IY37 1157 aaKnown RBP17.29■□□□□ 0.36
VAMP4-202ENST00000367740 IFNL3Q8IZI9 196 aa17.29■□□□□ 0.36
VAMP4-202ENST00000367740 DCAF4Q8WV16 495 aa17.29■□□□□ 0.36
VAMP4-202ENST00000367740 APPBP2Q92624 585 aa17.29■□□□□ 0.36
VAMP4-202ENST00000367740 CLP1Q92989 425 aaKnown RBP17.29■□□□□ 0.36
VAMP4-202ENST00000367740 EMID1Q96A84 441 aaPredicted RBP17.29■□□□□ 0.36
VAMP4-202ENST00000367740 PHF7Q9BWX1 381 aaPredicted RBP17.29■□□□□ 0.36
VAMP4-202ENST00000367740 RWDD3Q9Y3V2 267 aa17.29■□□□□ 0.36
VAMP4-202ENST00000367740 MED19A0JLT2 244 aaPredicted RBP17.28■□□□□ 0.36
VAMP4-202ENST00000367740 B4DLN1 442 aa17.28■□□□□ 0.36
VAMP4-202ENST00000367740 M0R2C6 588 aa17.28■□□□□ 0.36
VAMP4-202ENST00000367740 GLP2RO95838 553 aa17.28■□□□□ 0.36
VAMP4-202ENST00000367740 APPP05067 770 aa17.28■□□□□ 0.36
VAMP4-202ENST00000367740 GNAT2P19087 354 aa17.28■□□□□ 0.36
VAMP4-202ENST00000367740 MRPL12P52815 198 aaKnown RBP17.28■□□□□ 0.36
VAMP4-202ENST00000367740 EFHBQ8N7U6 833 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms