RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 THEM5Q8N1Q8 247 aa17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 FNDC3AQ9Y2H6 1198 aaKnown RBP17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 A0A0D9SFI3 127 aa17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 PRPSAP2O60256 369 aa17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 EEF1GP26641 437 aaKnown RBP17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 ADD1P35611 737 aaKnown RBP17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 RSBN1LQ6PCB5 846 aaPredicted RBP17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 UHMK1Q8TAS1 419 aaKnown RBP17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 PDE8BO95263 885 aa17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 RTKN2Q8IZC4 609 aa17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 C2orf69Q8N8R5 385 aa17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 CCHCR1Q8TD31 782 aa17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 MLH3Q9UHC1 1453 aa17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 DPYSL4O14531 572 aa17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 DNAJC8O75937 253 aaPredicted RBP17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 GNAT1P11488 350 aa17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 KRT27Q7Z3Y8 459 aa17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 NXF1Q9UBU9 619 aaKnown RBP17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 PPP2R2CQ9Y2T4 447 aa17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 ABCC12Q96J65 1359 aa17■□□□□ 0.31
NUCKS1-201ENST00000367142 BNIP3LO60238 219 aa17■□□□□ 0.31
NUCKS1-201ENST00000367142 FGAP02671 866 aa17■□□□□ 0.31
NUCKS1-201ENST00000367142 SETSIPP0DME0 302 aa17■□□□□ 0.31
NUCKS1-201ENST00000367142 MSH2P43246 934 aa17■□□□□ 0.31
NUCKS1-201ENST00000367142 NOP14P78316 857 aaKnown RBP17■□□□□ 0.31
NUCKS1-201ENST00000367142 CIAPIN1Q6FI81 312 aa17■□□□□ 0.31
NUCKS1-201ENST00000367142 TESK2Q96S53 571 aa17■□□□□ 0.31
NUCKS1-201ENST00000367142 COPB1P53618 953 aaKnown RBP17■□□□□ 0.31
NUCKS1-201ENST00000367142 HP1BP3Q5SSJ5 553 aaPredicted RBP17■□□□□ 0.31
NUCKS1-201ENST00000367142 WDR62O43379 1518 aa17■□□□□ 0.31
NUCKS1-201ENST00000367142 HEXIM2Q96MH2 286 aaKnown RBP17■□□□□ 0.31
NUCKS1-201ENST00000367142 TACO1Q9BSH4 297 aaKnown RBP17■□□□□ 0.31
NUCKS1-201ENST00000367142 TRIM35Q9UPQ4 493 aa17■□□□□ 0.31
NUCKS1-201ENST00000367142 MAP3K7O43318 606 aa17■□□□□ 0.31
NUCKS1-201ENST00000367142 IL6STP40189 918 aaPredicted RBP17■□□□□ 0.31
NUCKS1-201ENST00000367142 RECQLP46063 649 aaPredicted RBP17■□□□□ 0.31
NUCKS1-201ENST00000367142 MAGED2Q9UNF1 606 aaPredicted RBP17■□□□□ 0.31
NUCKS1-201ENST00000367142 BTBD18B2RXH4 712 aa17■□□□□ 0.31
NUCKS1-201ENST00000367142 CHEK2O96017 543 aa17■□□□□ 0.31
NUCKS1-201ENST00000367142 DHX38Q92620 1227 aaKnown RBP17■□□□□ 0.31
NUCKS1-201ENST00000367142 TMEM247A6NEH6 219 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 HNRNPCL2B2RXH8 293 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 HNRNPCL1O60812 293 aaKnown RBP16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 PMLP29590 882 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 RASSF7Q02833 373 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 DESI2Q9BSY9 194 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 MOSPD1Q9UJG1 213 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 MID2Q9UJV3 735 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 POLIQ9UNA4 740 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 TMTC3Q6ZXV5 915 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 DHTKD1Q96HY7 919 aaPredicted RBP16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 ZNF18P17022 549 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 PHKA1P46020 1223 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 GOLGA8FQ08AF8 430 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 GOLGA8DPQ0D2H9 430 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 EEPD1Q7L9B9 569 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 DNAJC5BQ9UF47 199 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 KAT6BQ8WYB5 2073 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 IGSF3O75054 1194 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 SEC24BO95487 1268 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 NAA35Q5VZE5 725 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 SPOPLQ6IQ16 392 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 CDC26Q8NHZ8 85 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 TCP11Q8WWU5 503 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 USP28Q96RU2 1077 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 PPP1R16BQ96T49 567 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 PCIF1Q9H4Z3 704 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 EHHADHQ08426 723 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 SGO2Q562F6 1265 aa16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 RC3H1Q5TC82 1133 aaKnown RBP16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 MAGOHBQ96A72 148 aaKnown RBP16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 MRPL46Q9H2W6 279 aaKnown RBP16.99■□□□□ 0.31
NUCKS1-201ENST00000367142 MAST1Q9Y2H9 1570 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 N4BP2L2Q92802 583 aaPredicted RBP16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 DRC3Q9H069 523 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 RAD17O75943 681 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 MX2P20592 715 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 ZNF445P59923 1031 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 ALCAMQ13740 583 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 KLC3Q6P597 504 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 ECEL1O95672 775 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 ZNF827Q17R98 1081 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 FBXL13Q8NEE6 735 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 FOXP1Q9H334 677 aaPredicted RBP16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 NUP153P49790 1475 aaKnown RBP16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 IFNA8P32881 189 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 OSTNP61366 133 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 SSH3Q8TE77 659 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 TUBGCP2Q9BSJ2 902 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 RNF26Q9BY78 433 aaPredicted RBP16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 PI4KBQ9UBF8 816 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 SERPINB13Q9UIV8 391 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 DYNLT1P63172 113 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 RBM6P78332 1123 aaKnown RBP16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 ALKBH8Q96BT7 664 aaKnown RBP16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 CLIC6Q96NY7 704 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 DONSONQ9NYP3 566 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 JRKLQ9Y4A0 524 aa16.98■□□□□ 0.31
NUCKS1-201ENST00000367142 SLC16A2P36021 539 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 SHANK2Q9UPX8 1470 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms