RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 RBL2Q08999 1139 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 LONRF3Q496Y0 759 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 PI4KBQ9UBF8 816 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 FMO2Q99518 471 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 PPP1R12CQ9BZL4 782 aa13.08□□□□□ -0.32
CDC42BPA-203ENST00000366766 YARSP54577 528 aaKnown RBP13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 KRT39Q6A163 491 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 EDEM3Q9BZQ6 932 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 TACC3Q9Y6A5 838 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 IFNB1P01574 187 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 FAM98CQ17RN3 349 aaKnown RBP13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 FAM160B2Q86V87 743 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 USP21Q9UK80 565 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 PRR36Q9H6K5 1346 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 ADRA2BP18089 450 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 TMTC3Q6ZXV5 915 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 OSBP2Q969R2 916 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 DEPDC5O75140 1603 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 SRGAP2BP0DMP2 458 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 KPNA2P52292 529 aaKnown RBP13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 RASSF7Q02833 373 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 ADCY2Q08462 1091 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 TCP10Q12799 353 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 MIPOL1Q8TD10 442 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 STRBPQ96SI9 672 aaKnown RBP13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 SEL1LQ9UBV2 794 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 NOD1Q9Y239 953 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 LGALS16A8MUM7 142 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 UNC13DQ70J99 1090 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 DCAF4Q8WV16 495 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 CCPG1Q9ULG6 757 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 USTQ9Y2C2 406 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 TNS3Q68CZ2 1445 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 DIP2CQ9Y2E4 1556 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 HSPA8P11142 646 aaKnown RBP13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 BFSP1Q12934 665 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 LRRC8CQ8TDW0 803 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 NDST4Q9H3R1 872 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 OVOS2A0A0J9YW53 1432 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 OVOS2Q6IE36 1432 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 ZWINTO95229 277 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 PIK3CAP42336 1068 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 NHEJ1Q9H9Q4 299 aaPredicted RBP13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 TLR7Q9NYK1 1049 aaKnown RBP13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 CAPN7Q9Y6W3 813 aa13.07□□□□□ -0.32
CDC42BPA-203ENST00000366766 ZNF233A6NK53 670 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 INTS9Q9NV88 658 aaKnown RBP13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 ZSWIM5Q9P217 1185 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 NBPF9Q3BBW0 867 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 ANKRD26Q9UPS8 1709 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 ECEL1O95672 775 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 SNCBQ16143 134 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 PAGE5Q96GU1 130 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 RILPQ96NA2 401 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 TBCKQ8TEA7 893 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 DONSONQ9NYP3 566 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 MORC4Q8TE76 937 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 IQSEC2Q5JU85 1478 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 TMEM232C9JQI7 657 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 PLCG1P19174 1290 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 HSP90AA5PQ58FG0 334 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 SLFN12LQ6IEE8 588 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 GRID2IPA4D2P6 1211 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 SASH1O94885 1247 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 KCTD17Q8N5Z5 321 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 KIAA1586Q9HCI6 787 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 A0A087WUV0 522 aaPredicted RBP13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 HEXIM1O94992 359 aaKnown RBP13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 C6orf118Q5T5N4 469 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 LRRC47Q8N1G4 583 aaKnown RBP13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 SUGT1Q9Y2Z0 365 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 MYO3BQ8WXR4 1341 aa13.06□□□□□ -0.32
CDC42BPA-203ENST00000366766 RASGRF1Q13972 1273 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 MUM1Q2TAK8 710 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 HAUS8Q9BT25 410 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 TARSL2A2RTX5 802 aaKnown RBP13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 DDX39AO00148 427 aaKnown RBP13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 KRT19P08727 400 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 EPS15L1Q9UBC2 864 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 PVALEFA0A1B0GWK0 134 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 TESPA1A2RU30 521 aaPredicted RBP13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 SCINQ9Y6U3 715 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 AGLP35573 1532 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 A0A1W2PQC6 194 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 KRT31Q15323 416 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 NEK9Q8TD19 979 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 GJA10Q969M2 543 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 MAGOHBQ96A72 148 aaKnown RBP13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 MID2Q9UJV3 735 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 EPSTI1Q96J88 318 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 CEP72Q9P209 647 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 PTPRMP28827 1452 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 BZW1Q7L1Q6 419 aaKnown RBP13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 GSDMBQ8TAX9 411 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 PPEF1O14829 653 aaPredicted RBP13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 TTC39CQ8N584 583 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 ZNF577Q9BSK1 485 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 PIK3C2BO00750 1634 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 MCF2LO15068 1137 aa13.05□□□□□ -0.32
CDC42BPA-203ENST00000366766 PLA2G12BQ9BX93 195 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms