RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 SRPRBQ9Y5M8 271 aaKnown RBP23.36■■□□□ 1.33
SHISA4-201ENST00000362011 ECM2O94769 699 aaPredicted RBP23.35■■□□□ 1.33
SHISA4-201ENST00000362011 FCGRTP55899 365 aa23.35■■□□□ 1.33
SHISA4-201ENST00000362011 PRR16Q569H4 304 aa23.35■■□□□ 1.33
SHISA4-201ENST00000362011 ADALQ6DHV7 355 aa23.35■■□□□ 1.33
SHISA4-201ENST00000362011 IWS1Q96ST2 819 aa23.35■■□□□ 1.33
SHISA4-201ENST00000362011 SOWAHBA6NEL2 793 aa23.34■■□□□ 1.33
SHISA4-201ENST00000362011 FAM86B1E9PN63 330 aa23.34■■□□□ 1.33
SHISA4-201ENST00000362011 NR3C2P08235 984 aa23.34■■□□□ 1.33
SHISA4-201ENST00000362011 FAM86B2P0C5J1 330 aa23.34■■□□□ 1.33
SHISA4-201ENST00000362011 MYCLP12524 364 aaPredicted RBP23.34■■□□□ 1.33
SHISA4-201ENST00000362011 SETQ01105 290 aaPredicted RBP23.34■■□□□ 1.33
SHISA4-201ENST00000362011 TPRNQ4KMQ1 711 aa23.34■■□□□ 1.33
SHISA4-201ENST00000362011 NIPA1Q7RTP0 329 aa23.34■■□□□ 1.33
SHISA4-201ENST00000362011 SLAIN1Q8ND83 568 aa23.34■■□□□ 1.33
SHISA4-201ENST00000362011 MPHOSPH6Q99547 160 aaKnown RBP23.34■■□□□ 1.33
SHISA4-201ENST00000362011 MXRA8Q9BRK3 442 aa23.34■■□□□ 1.33
SHISA4-201ENST00000362011 IGLV3-22A0A075B6J6 115 aa23.33■■□□□ 1.33
SHISA4-201ENST00000362011 B4DLN1 442 aa23.33■■□□□ 1.33
SHISA4-201ENST00000362011 MARCH6O60337 910 aa23.33■■□□□ 1.33
SHISA4-201ENST00000362011 PGK2P07205 417 aa23.33■■□□□ 1.33
SHISA4-201ENST00000362011 ADORA2AP29274 412 aa23.33■■□□□ 1.33
SHISA4-201ENST00000362011 CEP55Q53EZ4 464 aa23.33■■□□□ 1.33
SHISA4-201ENST00000362011 CHRDL2Q6WN34 429 aa23.33■■□□□ 1.33
SHISA4-201ENST00000362011 DTHD1Q6ZMT9 781 aa23.33■■□□□ 1.33
SHISA4-201ENST00000362011 PLA2G4DQ86XP0 818 aa23.33■■□□□ 1.33
SHISA4-201ENST00000362011 MTMR9Q96QG7 549 aa23.33■■□□□ 1.33
SHISA4-201ENST00000362011 RNF208Q9H0X6 261 aa23.33■■□□□ 1.33
SHISA4-201ENST00000362011 GABRQQ9UN88 632 aa23.33■■□□□ 1.33
SHISA4-201ENST00000362011 UBIAD1Q9Y5Z9 338 aa23.33■■□□□ 1.33
SHISA4-201ENST00000362011 SZT2Q5T011 3432 aa23.33■■□□□ 1.33
SHISA4-201ENST00000362011 TRIOBPQ9H2D6 2365 aa23.33■■□□□ 1.33
SHISA4-201ENST00000362011 RANBP2P49792 3224 aaKnown RBP23.33■■□□□ 1.32
SHISA4-201ENST00000362011 A0A1W2PQ27 194 aa23.33■■□□□ 1.32
SHISA4-201ENST00000362011 A0A1W2PQ64 194 aa23.33■■□□□ 1.32
SHISA4-201ENST00000362011 A0A1W2PQD8 194 aa23.33■■□□□ 1.32
SHISA4-201ENST00000362011 SLC15A5A6NIM6 579 aa23.33■■□□□ 1.32
SHISA4-201ENST00000362011 TBX3O15119 743 aa23.33■■□□□ 1.32
SHISA4-201ENST00000362011 MRPS9P82933 396 aaKnown RBP23.33■■□□□ 1.32
SHISA4-201ENST00000362011 GRB14Q14449 540 aa23.33■■□□□ 1.32
SHISA4-201ENST00000362011 AXDND1Q5T1B0 1012 aaPredicted RBP23.33■■□□□ 1.32
SHISA4-201ENST00000362011 VSIG10LQ86VR7 867 aa23.33■■□□□ 1.32
SHISA4-201ENST00000362011 LENG9Q96B70 501 aa23.33■■□□□ 1.32
SHISA4-201ENST00000362011 CLIC6Q96NY7 704 aa23.33■■□□□ 1.32
SHISA4-201ENST00000362011 ASTN1O14525 1302 aa23.32■■□□□ 1.32
SHISA4-201ENST00000362011 LOC102724159A0A0B4J2E5 919 aa23.32■■□□□ 1.32
SHISA4-201ENST00000362011 VWA3AA6NCI4 1184 aa23.32■■□□□ 1.32
SHISA4-201ENST00000362011 STAM2O75886 525 aa23.32■■□□□ 1.32
SHISA4-201ENST00000362011 MBD3O95983 291 aa23.32■■□□□ 1.32
SHISA4-201ENST00000362011 CAPN2P17655 700 aa23.32■■□□□ 1.32
SHISA4-201ENST00000362011 PWP2Q15269 919 aaKnown RBP23.32■■□□□ 1.32
SHISA4-201ENST00000362011 SLFN12Q8IYM2 578 aa23.32■■□□□ 1.32
SHISA4-201ENST00000362011 ZNF579Q8NAF0 562 aaKnown RBP23.32■■□□□ 1.32
SHISA4-201ENST00000362011 PXYLP1Q8TE99 480 aa23.32■■□□□ 1.32
SHISA4-201ENST00000362011 U2AF1L4Q8WU68 220 aaKnown RBP23.32■■□□□ 1.32
SHISA4-201ENST00000362011 DPF3Q92784 378 aa23.32■■□□□ 1.32
SHISA4-201ENST00000362011 ZFP91Q96JP5 570 aaPredicted RBP23.32■■□□□ 1.32
SHISA4-201ENST00000362011 HTATIP2Q9BUP3 242 aa23.32■■□□□ 1.32
SHISA4-201ENST00000362011 KCNMB3Q9NPA1 279 aa23.32■■□□□ 1.32
SHISA4-201ENST00000362011 LOXHD1Q8IVV2 1947 aa23.31■■□□□ 1.32
SHISA4-201ENST00000362011 MEIS1O00470 390 aa23.31■■□□□ 1.32
SHISA4-201ENST00000362011 TXKP42681 527 aa23.31■■□□□ 1.32
SHISA4-201ENST00000362011 GRIN1Q05586 938 aa23.31■■□□□ 1.32
SHISA4-201ENST00000362011 IRF5Q13568 498 aa23.31■■□□□ 1.32
SHISA4-201ENST00000362011 STXBP2Q15833 593 aa23.31■■□□□ 1.32
SHISA4-201ENST00000362011 TMEM266Q2M3C6 531 aa23.31■■□□□ 1.32
SHISA4-201ENST00000362011 SKOR2Q2VWA4 1001 aaPredicted RBP23.31■■□□□ 1.32
SHISA4-201ENST00000362011 ZNF792Q3KQV3 632 aa23.31■■□□□ 1.32
SHISA4-201ENST00000362011 CYP2W1Q8TAV3 490 aa23.31■■□□□ 1.32
SHISA4-201ENST00000362011 FGD4Q96M96 766 aa23.31■■□□□ 1.32
SHISA4-201ENST00000362011 FAM20AQ96MK3 541 aa23.31■■□□□ 1.32
SHISA4-201ENST00000362011 CSRNP2Q9H175 543 aa23.31■■□□□ 1.32
SHISA4-201ENST00000362011 JADE2Q9NQC1 790 aa23.31■■□□□ 1.32
SHISA4-201ENST00000362011 DDX49Q9Y6V7 483 aaKnown RBP23.31■■□□□ 1.32
SHISA4-201ENST00000362011 MSH4O15457 936 aa23.3■■□□□ 1.32
SHISA4-201ENST00000362011 SGPL1O95470 568 aa23.3■■□□□ 1.32
SHISA4-201ENST00000362011 ITGB5P18084 799 aa23.3■■□□□ 1.32
SHISA4-201ENST00000362011 CMA1P23946 247 aa23.3■■□□□ 1.32
SHISA4-201ENST00000362011 EDNRBP24530 442 aa23.3■■□□□ 1.32
SHISA4-201ENST00000362011 LONP1P36776 959 aaKnown RBP23.3■■□□□ 1.32
SHISA4-201ENST00000362011 PDE4DQ08499 809 aa23.3■■□□□ 1.32
SHISA4-201ENST00000362011 IL17AQ16552 155 aa23.3■■□□□ 1.32
SHISA4-201ENST00000362011 DPP9Q86TI2 863 aa23.3■■□□□ 1.32
SHISA4-201ENST00000362011 NLRX1Q86UT6 975 aa23.3■■□□□ 1.32
SHISA4-201ENST00000362011 FSIP1Q8NA03 581 aa23.3■■□□□ 1.32
SHISA4-201ENST00000362011 ETNPPLQ8TBG4 499 aa23.3■■□□□ 1.32
SHISA4-201ENST00000362011 MRPS27Q92552 414 aaKnown RBP23.3■■□□□ 1.32
SHISA4-201ENST00000362011 HAS1Q92839 578 aa23.3■■□□□ 1.32
SHISA4-201ENST00000362011 UNC93B1Q9H1C4 597 aa23.3■■□□□ 1.32
SHISA4-201ENST00000362011 COBLO75128 1261 aa23.29■■□□□ 1.32
SHISA4-201ENST00000362011 FLT3LGP49771 235 aa23.29■■□□□ 1.32
SHISA4-201ENST00000362011 RESP18Q5W5W9 173 aa23.29■■□□□ 1.32
SHISA4-201ENST00000362011 SHC4Q6S5L8 630 aa23.29■■□□□ 1.32
SHISA4-201ENST00000362011 CCDC73Q6ZRK6 1079 aa23.29■■□□□ 1.32
SHISA4-201ENST00000362011 GPT2Q8TD30 523 aa23.29■■□□□ 1.32
SHISA4-201ENST00000362011 GPRASP2Q96D09 838 aa23.29■■□□□ 1.32
SHISA4-201ENST00000362011 RAB34Q9BZG1 259 aa23.29■■□□□ 1.32
SHISA4-201ENST00000362011 WDR11Q9BZH6 1224 aa23.29■■□□□ 1.32
SHISA4-201ENST00000362011 SLC5A4Q9NY91 659 aa23.29■■□□□ 1.32
SHISA4-201ENST00000362011 DIS3Q9Y2L1 958 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms