RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 SMYD3Q9H7B4 428 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 TMOD4Q9NZQ9 345 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 CCDC188H7C350 402 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 AP2B1P63010 937 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 ITKQ08881 620 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 GALNT17Q6IS24 598 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 EAF2Q96CJ1 260 aaPredicted RBP14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 NACA2Q9H009 215 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 KDM1AO60341 852 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 PDE8AO60658 829 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 FBXW10Q5XX13 1052 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 TTLL7Q6ZT98 887 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 SLFN12Q8IYM2 578 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 NDE1Q9NXR1 346 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 IQANK1A0A1B0GTG1 560 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 HAUS5O94927 633 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 IL13P35225 146 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 BPIFB4P59827 614 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 ZYXQ15942 572 aaKnown RBP14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 IFNL3Q8IZI9 196 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 NUDCD1Q96RS6 583 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 TRIM15Q9C019 465 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 ZNF277Q9NRM2 450 aaPredicted RBP14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 DDX25Q9UHL0 483 aaKnown RBP14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 NPC1L1Q9UHC9 1359 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 KRT1P04264 644 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 HSPA8P11142 646 aaKnown RBP14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 PYGBP11216 843 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 ACTN1P12814 892 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 TMOD1P28289 359 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 CDR2Q01850 454 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 PCGF5Q86SE9 256 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 STAMBPL1Q96FJ0 436 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 LRRC37BQ96QE4 947 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 THAP9Q9H5L6 903 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 AZI2Q9H6S1 392 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 PFDN6O15212 129 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 PSMC1P62191 440 aaKnown RBP14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 MAPKAPK5Q8IW41 473 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 KIAA2013Q8IYS2 634 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 BATF3Q9NR55 127 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 IPO11Q9UI26 975 aaKnown RBP14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 TLK1Q9UKI8 766 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 CAPN9O14815 690 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 GFPT2O94808 682 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 FGAP02671 866 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 SLC12A1Q13621 1099 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 PSPC1Q8WXF1 523 aaKnown RBP14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 NT5C1BQ96P26 610 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 A6NJR5 290 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 MCF2LO15068 1137 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 KIF23Q02241 960 aaPredicted RBP14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 BBS9Q3SYG4 887 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 RBM26Q5T8P6 1007 aaKnown RBP14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 ZNF790Q6PG37 636 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 LARP4BQ92615 738 aaKnown RBP14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 TTC17Q96AE7 1141 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 ARPP21Q9UBL0 812 aaPredicted RBP14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 USP27XA6NNY8 438 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 FGGP02679 453 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 TMPRSS15P98073 1019 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 SPOPLQ6IQ16 392 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 ANO5Q75V66 913 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 TTC1Q99614 292 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 STK17AQ9UEE5 414 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 MED23Q9ULK4 1368 aa14.48□□□□□ -0.09
CCDC144A-203ENST00000360495 SH3TC1Q8TE82 1336 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 LRRN2O75325 713 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 STAT2P52630 851 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 PDLIM2Q96JY6 352 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 LZTS1Q9Y250 596 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 ABCC12Q96J65 1359 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 SPDYE16A6NNV3 312 aaPredicted RBP14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 LRRC41Q15345 812 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 SPDYE2Q495Y8 402 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 CFAP36Q96G28 342 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 TRPV6Q9H1D0 765 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 PSTPIP2Q9H939 334 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 GINM1Q9NU53 330 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 PLB1Q6P1J6 1458 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 RASA4BC9J798 803 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 MEFVO15553 781 aaPredicted RBP14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 RASA4O43374 803 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 TNNC2P02585 160 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 DYNLT1P63172 113 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 ARHGEF25Q86VW2 580 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 WDR75Q8IWA0 830 aaKnown RBP14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 CHMP6Q96FZ7 201 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 FAM161BQ96MY7 647 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 ING2Q9H160 280 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 IPO5O00410 1097 aaKnown RBP14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 S100BP04271 92 aaPredicted RBP14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 KCNA4P22459 653 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 HOXC9P31274 260 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 FKBP3Q00688 224 aaKnown RBP14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 PSMD2Q13200 908 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 PRPSAP1Q14558 356 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 CENPUQ71F23 418 aa14.47□□□□□ -0.09
CCDC144A-203ENST00000360495 FBXL13Q8NEE6 735 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms