RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 ETNPPLQ8TBG4 499 aa15.16■□□□□ 0.02
CCDC197-201ENST00000359253 TRIM44Q96DX7 344 aaPredicted RBP15.16■□□□□ 0.02
CCDC197-201ENST00000359253 TRERF1Q96PN7 1200 aa15.16■□□□□ 0.02
CCDC197-201ENST00000359253 P2RX7Q99572 595 aaKnown RBP15.16■□□□□ 0.02
CCDC197-201ENST00000359253 TEX13BQ9BXU2 312 aa15.16■□□□□ 0.02
CCDC197-201ENST00000359253 RAVER2Q9HCJ3 691 aaKnown RBP15.16■□□□□ 0.02
CCDC197-201ENST00000359253 OTOFQ9HC10 1997 aa15.16■□□□□ 0.02
CCDC197-201ENST00000359253 FRMPD4Q14CM0 1322 aa15.16■□□□□ 0.02
CCDC197-201ENST00000359253 PCNTO95613 3336 aa15.15■□□□□ 0.02
CCDC197-201ENST00000359253 IGF2BP3O00425 579 aaKnown RBP eCLIP15.15■□□□□ 0.02
CCDC197-201ENST00000359253 MUTP22033 750 aa15.15■□□□□ 0.02
CCDC197-201ENST00000359253 COPB2P35606 906 aa15.15■□□□□ 0.02
CCDC197-201ENST00000359253 AFMP43652 599 aa15.15■□□□□ 0.02
CCDC197-201ENST00000359253 CEP55Q53EZ4 464 aa15.15■□□□□ 0.02
CCDC197-201ENST00000359253 NAALADL2Q58DX5 795 aa15.15■□□□□ 0.02
CCDC197-201ENST00000359253 CNNM4Q6P4Q7 775 aa15.15■□□□□ 0.02
CCDC197-201ENST00000359253 SAMD1Q6SPF0 538 aaPredicted RBP15.15■□□□□ 0.02
CCDC197-201ENST00000359253 SV2BQ7L1I2 683 aa15.15■□□□□ 0.02
CCDC197-201ENST00000359253 DHX40Q8IX18 779 aaKnown RBP15.15■□□□□ 0.02
CCDC197-201ENST00000359253 CHST13Q8NET6 341 aa15.15■□□□□ 0.02
CCDC197-201ENST00000359253 SNX29Q8TEQ0 813 aa15.15■□□□□ 0.02
CCDC197-201ENST00000359253 ERCC4Q92889 916 aaPredicted RBP15.15■□□□□ 0.02
CCDC197-201ENST00000359253 LENG9Q96B70 501 aa15.15■□□□□ 0.02
CCDC197-201ENST00000359253 ATG4CQ96DT6 458 aa15.15■□□□□ 0.02
CCDC197-201ENST00000359253 C7orf25Q9BPX7 421 aa15.15■□□□□ 0.02
CCDC197-201ENST00000359253 MMTAG2Q9BU76 263 aaKnown RBP15.15■□□□□ 0.02
CCDC197-201ENST00000359253 ZFYVE28Q9HCC9 887 aa15.15■□□□□ 0.02
CCDC197-201ENST00000359253 IGLV3-22A0A075B6J6 115 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 FAM86B1E9PN63 330 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 MEIS1O00470 390 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 BIN1O00499 593 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 FOXN1O15353 648 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 FAM86B2P0C5J1 330 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 PRR29P0C7W0 189 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 PLCG1P19174 1290 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 CDC25AP30304 524 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 MYL5Q02045 173 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 TMEM119Q4V9L6 283 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 PCNX4Q63HM2 1172 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 GPAT2Q6NUI2 795 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 RNF207Q6ZRF8 634 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.14■□□□□ 0.01
CCDC197-201ENST00000359253 ENOX1Q8TC92 643 aaKnown RBP15.14■□□□□ 0.01
CCDC197-201ENST00000359253 TBC1D5Q92609 795 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 WDR11Q9BZH6 1224 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 PRDM10Q9NQV6 1147 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 FBXO40Q9UH90 709 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 AGTPBP1Q9UPW5 1226 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 PARP14Q460N5 1801 aa15.14■□□□□ 0.01
CCDC197-201ENST00000359253 SPDYE16A6NNV3 312 aaPredicted RBP15.13■□□□□ 0.01
CCDC197-201ENST00000359253 PP2D1A8MPX8 630 aa15.13■□□□□ 0.01
CCDC197-201ENST00000359253 PDHXO00330 501 aa15.13■□□□□ 0.01
CCDC197-201ENST00000359253 MSH4O15457 936 aa15.13■□□□□ 0.01
CCDC197-201ENST00000359253 MAFGO15525 162 aa15.13■□□□□ 0.01
CCDC197-201ENST00000359253 ADCY5O95622 1261 aa15.13■□□□□ 0.01
CCDC197-201ENST00000359253 RPN1P04843 607 aaKnown RBP15.13■□□□□ 0.01
CCDC197-201ENST00000359253 TPM3P06753 285 aa15.13■□□□□ 0.01
CCDC197-201ENST00000359253 STAT3P40763 770 aa15.13■□□□□ 0.01
CCDC197-201ENST00000359253 ZNF658Q5TYW1 1059 aaPredicted RBP15.13■□□□□ 0.01
CCDC197-201ENST00000359253 PLA2G4DQ86XP0 818 aa15.13■□□□□ 0.01
CCDC197-201ENST00000359253 FAM43AQ8N2R8 423 aa15.13■□□□□ 0.01
CCDC197-201ENST00000359253 SYTL5Q8TDW5 730 aaPredicted RBP15.13■□□□□ 0.01
CCDC197-201ENST00000359253 GTF3C2Q8WUA4 911 aaPredicted RBP15.13■□□□□ 0.01
CCDC197-201ENST00000359253 SLC5A5Q92911 643 aa15.13■□□□□ 0.01
CCDC197-201ENST00000359253 RIT2Q99578 217 aa15.13■□□□□ 0.01
CCDC197-201ENST00000359253 MXRA8Q9BRK3 442 aa15.13■□□□□ 0.01
CCDC197-201ENST00000359253 ACAD9Q9H845 621 aa15.13■□□□□ 0.01
CCDC197-201ENST00000359253 BMP2KQ9NSY1 1161 aaPredicted RBP15.13■□□□□ 0.01
CCDC197-201ENST00000359253 RNF146Q9NTX7 359 aa15.13■□□□□ 0.01
CCDC197-201ENST00000359253 PNMA3Q9UL41 463 aa15.13■□□□□ 0.01
CCDC197-201ENST00000359253 ZNF214Q9UL59 606 aaPredicted RBP15.13■□□□□ 0.01
CCDC197-201ENST00000359253 PVALEFA0A1B0GWK0 134 aa15.12■□□□□ 0.01
CCDC197-201ENST00000359253 GOLGA6L6A8MZA4 724 aa15.12■□□□□ 0.01
CCDC197-201ENST00000359253 NFIBO00712 420 aa15.12■□□□□ 0.01
CCDC197-201ENST00000359253 TLR2O60603 784 aa15.12■□□□□ 0.01
CCDC197-201ENST00000359253 STAM2O75886 525 aa15.12■□□□□ 0.01
CCDC197-201ENST00000359253 OSBPP22059 807 aa15.12■□□□□ 0.01
CCDC197-201ENST00000359253 RPA1P27694 616 aa15.12■□□□□ 0.01
CCDC197-201ENST00000359253 CDC25BP30305 580 aa15.12■□□□□ 0.01
CCDC197-201ENST00000359253 RPS6P62753 249 aaKnown RBP15.12■□□□□ 0.01
CCDC197-201ENST00000359253 GRB10Q13322 594 aa15.12■□□□□ 0.01
CCDC197-201ENST00000359253 PPP2R5CQ13362 524 aa15.12■□□□□ 0.01
CCDC197-201ENST00000359253 DGKZQ13574 1117 aa15.12■□□□□ 0.01
CCDC197-201ENST00000359253 TAF1CQ15572 869 aaPredicted RBP15.12■□□□□ 0.01
CCDC197-201ENST00000359253 SNRNP48Q6IEG0 339 aaKnown RBP15.12■□□□□ 0.01
CCDC197-201ENST00000359253 GADL1Q6ZQY3 521 aa15.12■□□□□ 0.01
CCDC197-201ENST00000359253 AOPEPQ8N6M6 819 aa15.12■□□□□ 0.01
CCDC197-201ENST00000359253 LARP4BQ92615 738 aaKnown RBP15.12■□□□□ 0.01
CCDC197-201ENST00000359253 MTRQ99707 1265 aa15.12■□□□□ 0.01
CCDC197-201ENST00000359253 POLR3CQ9BUI4 534 aaPredicted RBP15.12■□□□□ 0.01
CCDC197-201ENST00000359253 RLFQ13129 1914 aa15.11■□□□□ 0.01
CCDC197-201ENST00000359253 LOC285556D6RIA3 1793 aa15.11■□□□□ 0.01
CCDC197-201ENST00000359253 POTEMA6NI47 508 aa15.11■□□□□ 0.01
CCDC197-201ENST00000359253 RHOBTB3O94955 611 aa15.11■□□□□ 0.01
CCDC197-201ENST00000359253 HSPA8P11142 646 aaKnown RBP15.11■□□□□ 0.01
CCDC197-201ENST00000359253 CCT6AP40227 531 aaKnown RBP15.11■□□□□ 0.01
CCDC197-201ENST00000359253 IRX3P78415 501 aaPredicted RBP15.11■□□□□ 0.01
CCDC197-201ENST00000359253 SPIRE1Q08AE8 756 aa15.11■□□□□ 0.01
CCDC197-201ENST00000359253 STIM1Q13586 685 aa15.11■□□□□ 0.01
CCDC197-201ENST00000359253 CUL4BQ13620 913 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms