RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 GOLGA8FQ08AF8 430 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 GOLGA8DPQ0D2H9 430 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 THOC5Q13769 683 aaKnown RBP14.11□□□□□ -0.15
NLRC3-202ENST00000359128 ADAT2Q7Z6V5 191 aaKnown RBP14.11□□□□□ -0.15
NLRC3-202ENST00000359128 FAM186BQ8IYM0 893 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 GADD45BO75293 160 aaPredicted RBP14.1□□□□□ -0.15
NLRC3-202ENST00000359128 RPS6KA4O75676 772 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 RBM6P78332 1123 aaKnown RBP14.1□□□□□ -0.15
NLRC3-202ENST00000359128 ZMYM1Q5SVZ6 1142 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 KRBA2Q6ZNG9 492 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 DCLK2Q8N568 766 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 MAGED2Q9UNF1 606 aaPredicted RBP14.1□□□□□ -0.15
NLRC3-202ENST00000359128 INPP5FQ9Y2H2 1132 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 ZHX2Q9Y6X8 837 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 ATP7BP35670 1465 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 CASP2P42575 452 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 UBE2SQ16763 222 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 TMEM179Q6ZVK1 233 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 MYLK4Q86YV6 388 aaPredicted RBP14.1□□□□□ -0.15
NLRC3-202ENST00000359128 DCAF4Q8WV16 495 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 RSRC1Q96IZ7 334 aaKnown RBP14.1□□□□□ -0.15
NLRC3-202ENST00000359128 CNOT6LQ96LI5 555 aaKnown RBP14.1□□□□□ -0.15
NLRC3-202ENST00000359128 COPRSQ9NQ92 184 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 NR2F2P24468 414 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 ARL13BQ3SXY8 428 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 OR6B2Q6IFH4 312 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 EFCC1Q9HA90 598 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 SAR1BQ9Y6B6 198 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 GOLGA8SH3BPF8 625 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 MAPK4P31152 587 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 CDK8P49336 464 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 YWHAGP61981 247 aaKnown RBP eCLIP14.1□□□□□ -0.15
NLRC3-202ENST00000359128 LMNB2Q03252 620 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 STXBP2Q15833 593 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 KRT71Q3SY84 523 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 SUSD4Q5VX71 490 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 USP17L2Q6R6M4 530 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 OLA1Q9NTK5 396 aaKnown RBP14.1□□□□□ -0.15
NLRC3-202ENST00000359128 FBXO40Q9UH90 709 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 FEM1BQ9UK73 627 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 IQCA1LA6NCM1 817 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 A6NNZ2 444 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 PDIA3P30101 505 aaKnown RBP14.1□□□□□ -0.15
NLRC3-202ENST00000359128 TUBB8Q3ZCM7 444 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 KCTD6Q8NC69 237 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 ZSWIM6Q9HCJ5 1215 aa14.1□□□□□ -0.15
NLRC3-202ENST00000359128 PNMA6FA0A0J9YX94 578 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 TRAPPC10P48553 1259 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 GUCY2FP51841 1108 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 MSTO1Q9BUK6 570 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 RNF26Q9BY78 433 aaPredicted RBP14.09□□□□□ -0.15
NLRC3-202ENST00000359128 FOXP1Q9H334 677 aaPredicted RBP14.09□□□□□ -0.15
NLRC3-202ENST00000359128 PRDM5Q9NQX1 630 aaPredicted RBP14.09□□□□□ -0.15
NLRC3-202ENST00000359128 CLIC4Q9Y696 253 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 ABCC12Q96J65 1359 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 MYO1FO00160 1098 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 CLIC2O15247 247 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 KCNA4P22459 653 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 HOXA13P31271 388 aaPredicted RBP14.09□□□□□ -0.15
NLRC3-202ENST00000359128 CACNB1Q02641 598 aaPredicted RBP14.09□□□□□ -0.15
NLRC3-202ENST00000359128 SCARA5Q6ZMJ2 495 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 KIAA1468Q9P260 1216 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 NDUFAB1O14561 156 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 CTNNA1P35221 906 aaKnown RBP14.09□□□□□ -0.15
NLRC3-202ENST00000359128 MESDQ14696 234 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 C10orf67Q8IYJ2 551 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 RAET1EQ8TD07 263 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 TSC1Q92574 1164 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 RNF123Q5XPI4 1314 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 USP17L5A8MUK1 530 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 MMEL1Q495T6 779 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 SLC27A3Q5K4L6 730 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 PSPC1Q8WXF1 523 aaKnown RBP14.09□□□□□ -0.15
NLRC3-202ENST00000359128 TXNDC9O14530 226 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 RNF40O75150 1001 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 H2AFZP0C0S5 128 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 CMA1P23946 247 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 ARHGAP4P98171 946 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 H2AFVQ71UI9 128 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 ATG3Q9NT62 314 aa14.09□□□□□ -0.15
NLRC3-202ENST00000359128 DDX41Q9UJV9 622 aaKnown RBP14.09□□□□□ -0.15
NLRC3-202ENST00000359128 ARHGEF18Q6ZSZ5 1173 aa14.08□□□□□ -0.15
NLRC3-202ENST00000359128 MCUQ8NE86 351 aa14.08□□□□□ -0.15
NLRC3-202ENST00000359128 ZNF653Q96CK0 615 aa14.08□□□□□ -0.15
NLRC3-202ENST00000359128 MMTAG2Q9BU76 263 aaKnown RBP14.08□□□□□ -0.15
NLRC3-202ENST00000359128 PASKQ96RG2 1323 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 MCF2LO15068 1137 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 PER1O15534 1290 aaPredicted RBP14.08□□□□□ -0.16
NLRC3-202ENST00000359128 JAK3P52333 1124 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 PHLDB2Q86SQ0 1253 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 DNAAF3Q8N9W5 541 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 XPO4Q9C0E2 1151 aaKnown RBP14.08□□□□□ -0.16
NLRC3-202ENST00000359128 SOX5P35711 763 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 TTC31Q49AM3 519 aaPredicted RBP14.08□□□□□ -0.16
NLRC3-202ENST00000359128 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.08□□□□□ -0.16
NLRC3-202ENST00000359128 KRT1P04264 644 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 CD58P19256 250 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 PCK1P35558 622 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 SCRN1Q12765 414 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 DNAJC24Q6P3W2 148 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms