RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 PLAGL2Q9UPG8 496 aa27.72■■■□□ 2.03
HDGF-201ENST00000357325 SAR1BQ9Y6B6 198 aa27.72■■■□□ 2.03
HDGF-201ENST00000357325 KRT86O43790 486 aa27.71■■■□□ 2.03
HDGF-201ENST00000357325 GDF11O95390 407 aa27.71■■■□□ 2.03
HDGF-201ENST00000357325 SLC1A4P43007 532 aa27.71■■■□□ 2.03
HDGF-201ENST00000357325 RBM5P52756 815 aaKnown RBP eCLIP27.71■■■□□ 2.035e-8■■□□□ 11.7
HDGF-201ENST00000357325 KRT27Q7Z3Y8 459 aa27.71■■■□□ 2.03
HDGF-201ENST00000357325 CCDC170Q8IYT3 715 aa27.71■■■□□ 2.03
HDGF-201ENST00000357325 CCDC42Q96M95 316 aa27.71■■■□□ 2.03
HDGF-201ENST00000357325 PANK4Q9NVE7 773 aa27.71■■■□□ 2.03
HDGF-201ENST00000357325 PDE2AO00408 941 aaPredicted RBP27.71■■■□□ 2.03
HDGF-201ENST00000357325 JAG1P78504 1218 aa27.71■■■□□ 2.03
HDGF-201ENST00000357325 KCNMA1Q12791 1236 aa27.71■■■□□ 2.03
HDGF-201ENST00000357325 CDC37Q16543 378 aaPredicted RBP27.71■■■□□ 2.03
HDGF-201ENST00000357325 PAPD7Q5XG87 772 aaKnown RBP27.71■■■□□ 2.03
HDGF-201ENST00000357325 RRAGAQ7L523 313 aa27.71■■■□□ 2.03
HDGF-201ENST00000357325 ZNF622Q969S3 477 aaKnown RBP eCLIP27.71■■■□□ 2.034e-15■□□□□ 9.2
HDGF-201ENST00000357325 MLXIPQ9HAP2 919 aa27.71■■■□□ 2.03
HDGF-201ENST00000357325 MYO3BQ8WXR4 1341 aa27.7■■■□□ 2.03
HDGF-201ENST00000357325 EIF4A3P38919 411 aaKnown RBP27.7■■■□□ 2.03
HDGF-201ENST00000357325 HNRNPLLQ8WVV9 542 aaKnown RBP27.7■■■□□ 2.03
HDGF-201ENST00000357325 L1RE1Q9UN81 338 aa27.7■■■□□ 2.03
HDGF-201ENST00000357325 CAPN6Q9Y6Q1 641 aa27.7■■■□□ 2.03
HDGF-201ENST00000357325 COL11A2P13942 1736 aaPredicted RBP27.7■■■□□ 2.02
HDGF-201ENST00000357325 MMP10P09238 476 aa27.7■■■□□ 2.02
HDGF-201ENST00000357325 ZCWPW2Q504Y3 356 aa27.7■■■□□ 2.02
HDGF-201ENST00000357325 SLFN13Q68D06 897 aa27.7■■■□□ 2.02
HDGF-201ENST00000357325 N4BP1O75113 896 aaKnown RBP27.69■■■□□ 2.02
HDGF-201ENST00000357325 MED24O75448 989 aa27.69■■■□□ 2.02
HDGF-201ENST00000357325 LRRC63Q05C16 580 aa27.69■■■□□ 2.02
HDGF-201ENST00000357325 CERKLQ49MI3 558 aaPredicted RBP27.69■■■□□ 2.02
HDGF-201ENST00000357325 MYOCDQ8IZQ8 938 aa27.69■■■□□ 2.02
HDGF-201ENST00000357325 BAP1Q92560 729 aa27.69■■■□□ 2.02
HDGF-201ENST00000357325 PURBQ96QR8 312 aaKnown RBP27.69■■■□□ 2.02
HDGF-201ENST00000357325 ANO3Q9BYT9 981 aa27.69■■■□□ 2.02
HDGF-201ENST00000357325 TANGO6Q9C0B7 1094 aa27.69■■■□□ 2.02
HDGF-201ENST00000357325 PDE11AQ9HCR9 933 aa27.69■■■□□ 2.02
HDGF-201ENST00000357325 BRWD3Q6RI45 1802 aa27.69■■■□□ 2.02
HDGF-201ENST00000357325 MEIS2O14770 477 aa27.68■■■□□ 2.02
HDGF-201ENST00000357325 VAV2P52735 878 aa27.68■■■□□ 2.02
HDGF-201ENST00000357325 ZNF662Q6ZS27 426 aa27.68■■■□□ 2.02
HDGF-201ENST00000357325 DRC1Q96MC2 740 aa27.68■■■□□ 2.02
HDGF-201ENST00000357325 HINFPQ9BQA5 517 aa27.68■■■□□ 2.02
HDGF-201ENST00000357325 FAM26FQ5R3K3 315 aa27.68■■■□□ 2.02
HDGF-201ENST00000357325 ZDHHC15Q96MV8 337 aa27.68■■■□□ 2.02
HDGF-201ENST00000357325 PCDHA2Q9Y5H9 948 aa27.68■■■□□ 2.02
HDGF-201ENST00000357325 POTEFA5A3E0 1075 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 TRAF5O00463 557 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 ZMYND10O75800 440 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 PLA2G4BP0C869 781 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 POTEIP0CG38 1075 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 KIF11P52732 1056 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 USH1GQ495M9 461 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 POTEGQ6S5H5 508 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 POTEEQ6S8J3 1075 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 POLD4Q9HCU8 107 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 SCN9AQ15858 1988 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 IPO7O95373 1038 aaKnown RBP27.67■■■□□ 2.02
HDGF-201ENST00000357325 HNRNPH3P31942 346 aaKnown RBP27.67■■■□□ 2.02
HDGF-201ENST00000357325 PSMC6P62333 389 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 CDK17Q00537 523 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 ANKRD13CQ8N6S4 541 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 EHD4Q9H223 541 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 BCAS3Q9H6U6 928 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 KCNMB3Q9NPA1 279 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 NLRC4Q9NPP4 1024 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 SALL4Q9UJQ4 1053 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 PCDHA13Q9Y5I0 950 aa27.67■■■□□ 2.02
HDGF-201ENST00000357325 CRACR2AQ9BSW2 395 aa27.66■■■□□ 2.02
HDGF-201ENST00000357325 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.66■■■□□ 2.02
HDGF-201ENST00000357325 MEIS1O00470 390 aa27.66■■■□□ 2.02
HDGF-201ENST00000357325 MOCS3O95396 460 aa27.66■■■□□ 2.02
HDGF-201ENST00000357325 ALDH1B1P30837 517 aa27.66■■■□□ 2.02
HDGF-201ENST00000357325 CYP2C19P33261 490 aa27.66■■■□□ 2.02
HDGF-201ENST00000357325 KIF5AQ12840 1032 aa27.66■■■□□ 2.02
HDGF-201ENST00000357325 ARSHQ5FYA8 562 aa27.66■■■□□ 2.02
HDGF-201ENST00000357325 GPBP1Q86WP2 473 aa27.66■■■□□ 2.02
HDGF-201ENST00000357325 IFIH1Q9BYX4 1025 aaKnown RBP27.66■■■□□ 2.02
HDGF-201ENST00000357325 POTEB2H3BUK9 544 aa27.65■■■□□ 2.02
HDGF-201ENST00000357325 PSMD2Q13200 908 aa27.65■■■□□ 2.02
HDGF-201ENST00000357325 HYIQ5T013 277 aa27.65■■■□□ 2.02
HDGF-201ENST00000357325 NLGN1Q8N2Q7 840 aa27.65■■■□□ 2.02
HDGF-201ENST00000357325 SECISBP2LQ93073 1101 aaKnown RBP27.65■■■□□ 2.02
HDGF-201ENST00000357325 JADE2Q9NQC1 790 aa27.65■■■□□ 2.02
HDGF-201ENST00000357325 CYP11B2P19099 503 aa27.65■■■□□ 2.02
HDGF-201ENST00000357325 GFPT1Q06210 699 aaPredicted RBP27.65■■■□□ 2.02
HDGF-201ENST00000357325 RRP1BQ14684 758 aaKnown RBP27.65■■■□□ 2.02
HDGF-201ENST00000357325 PRR16Q569H4 304 aa27.65■■■□□ 2.02
HDGF-201ENST00000357325 SLC30A10Q6XR72 485 aa27.65■■■□□ 2.02
HDGF-201ENST00000357325 CCDC17Q96LX7 622 aa27.65■■■□□ 2.02
HDGF-201ENST00000357325 ZHX3Q9H4I2 956 aa27.65■■■□□ 2.02
HDGF-201ENST00000357325 C10orf71Q711Q0 1435 aa27.64■■■□□ 2.02
HDGF-201ENST00000357325 GCFC2P16383 781 aaKnown RBP27.64■■■□□ 2.02
HDGF-201ENST00000357325 CASP5P51878 434 aa27.64■■■□□ 2.02
HDGF-201ENST00000357325 SPA17Q15506 151 aa27.64■■■□□ 2.02
HDGF-201ENST00000357325 SCFD1Q8WVM8 642 aa27.64■■■□□ 2.02
HDGF-201ENST00000357325 MKL1Q969V6 931 aa27.64■■■□□ 2.02
HDGF-201ENST00000357325 MASTLQ96GX5 879 aa27.64■■■□□ 2.02
HDGF-201ENST00000357325 LRRIQ3A6PVS8 624 aaPredicted RBP27.64■■■□□ 2.01
HDGF-201ENST00000357325 NOL4O94818 638 aa27.64■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms