RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 ZNF804BA4D1E1 1349 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 DPYSL4O14531 572 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 OR52Z1P0C646 297 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 MAPK4P31152 587 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 PTH1RQ03431 593 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 NEK8Q86SG6 692 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 PGBD3Q8N328 593 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 SNX19Q92543 992 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 ZNF341Q9BYN7 854 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 SRP68Q9UHB9 627 aaKnown RBP10.84□□□□□ -0.67
COL11A1-201ENST00000353414 SLC8A2Q9UPR5 921 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 CLCA2Q9UQC9 943 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 KITP10721 976 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 EIF2AK2P19525 551 aaKnown RBP10.84□□□□□ -0.67
COL11A1-201ENST00000353414 PHKA1P46020 1223 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 RUFY4Q6ZNE9 571 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 FRA10AC1Q70Z53 315 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 GLYCTKQ8IVS8 523 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 OR6B3Q8NGW1 331 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 SCHIP1Q9P0W5 487 aaPredicted RBP10.84□□□□□ -0.67
COL11A1-201ENST00000353414 MAP10Q9P2G4 905 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 DENND3A2RUS2 1198 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 SIX6OS1Q8N1H7 587 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 GFPT2O94808 682 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 KRT1P04264 644 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 SERPIND1P05546 499 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 GNGT1P63211 74 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 CCDC38Q502W7 563 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 FASTKD5Q7L8L6 764 aaKnown RBP10.83□□□□□ -0.68
COL11A1-201ENST00000353414 TRPC7Q9HCX4 862 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 TNKSO95271 1327 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 TTC4O95801 387 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 PFKFB1P16118 471 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 PPP1R2P41236 205 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 RSBN1LQ6PCB5 846 aaPredicted RBP10.83□□□□□ -0.68
COL11A1-201ENST00000353414 RNF168Q8IYW5 571 aaPredicted RBP10.83□□□□□ -0.68
COL11A1-201ENST00000353414 ELMOD1Q8N336 334 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 PPP1R36Q96LQ0 422 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 AFF2P51816 1311 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 A0A0D9SFI3 127 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 CCNA1P78396 465 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 CTTNQ14247 550 aaKnown RBP10.83□□□□□ -0.68
COL11A1-201ENST00000353414 HS1BP3Q53T59 392 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 ARHGEF18Q6ZSZ5 1173 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 TRIM67Q6ZTA4 783 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 LRRC8CQ8TDW0 803 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 OGFRQ9NZT2 677 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 SCAF8Q9UPN6 1271 aaKnown RBP10.83□□□□□ -0.68
COL11A1-201ENST00000353414 RALGAPBQ86X10 1494 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 ADAMTS12P58397 1594 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 FAM95CA0A1B0GW59 222 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 GOLGA8MH3BSY2 632 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 C2orf54Q08AI8 447 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 MXD4Q14582 209 aaPredicted RBP10.83□□□□□ -0.68
COL11A1-201ENST00000353414 HIPK4Q8NE63 616 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 FLAD1Q8NFF5 587 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 MOCS3O95396 460 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 POLR2BP30876 1174 aaKnown RBP10.83□□□□□ -0.68
COL11A1-201ENST00000353414 STAT2P52630 851 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 EN1Q05925 392 aaPredicted RBP10.83□□□□□ -0.68
COL11A1-201ENST00000353414 DALRD3Q5D0E6 543 aaKnown RBP10.83□□□□□ -0.68
COL11A1-201ENST00000353414 MLKLQ8NB16 471 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 KDM2BQ8NHM5 1336 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 SRGAP2BP0DMP2 458 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 EXOC3L4Q17RC7 722 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 RNF135Q8IUD6 432 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 BBS5Q8N3I7 341 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 GRK7Q8WTQ7 553 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 SMAD5Q99717 465 aaKnown RBP10.83□□□□□ -0.68
COL11A1-201ENST00000353414 FAF1Q9UNN5 650 aaPredicted RBP10.83□□□□□ -0.68
COL11A1-201ENST00000353414 ORC6Q9Y5N6 252 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 SAR1BQ9Y6B6 198 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 CAPN7Q9Y6W3 813 aa10.83□□□□□ -0.68
COL11A1-201ENST00000353414 DUOX2Q9NRD8 1548 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 FAM196BA6NMK8 535 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 GNA14O95837 355 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 PTK2Q05397 1052 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 SLC27A3Q5K4L6 730 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 DDX53Q86TM3 631 aaKnown RBP10.82□□□□□ -0.68
COL11A1-201ENST00000353414 CREB3O43889 395 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 RNF40O75150 1001 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 USP17L8P0C7I0 530 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 PDXDC2PQ6P474 469 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 ATP10BO94823 1461 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 CFAP69A5D8W1 941 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 PSMC5P62195 406 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 GUCY2DQ02846 1103 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 PRPF4O43172 522 aaKnown RBP eCLIP10.82□□□□□ -0.68
COL11A1-201ENST00000353414 EVI5O60447 810 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 PFDN1O60925 122 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 TMED1Q13445 227 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 C10orf76Q5T2E6 689 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 ZBTB40Q9NUA8 1239 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 USP17L3A6NCW0 530 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 USP17L4A6NCW7 530 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 BTBD18B2RXH4 712 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 SERPINB2P05120 415 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 SLMAPQ14BN4 828 aa10.82□□□□□ -0.68
COL11A1-201ENST00000353414 R3HDM1Q15032 1099 aaKnown RBP10.82□□□□□ -0.68
COL11A1-201ENST00000353414 USP17L1Q7RTZ2 530 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms