RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 MYL7Q01449 175 aa16.31■□□□□ 0.2
CUL3-202ENST00000344951 CCDC85BQ15834 202 aaPredicted RBP16.31■□□□□ 0.2
CUL3-202ENST00000344951 CSRNP1Q96S65 589 aa16.31■□□□□ 0.2
CUL3-202ENST00000344951 FTOQ9C0B1 505 aaKnown RBP eCLIP16.31■□□□□ 0.2
CUL3-202ENST00000344951 DNAJC17Q9NVM6 304 aaKnown RBP16.31■□□□□ 0.2
CUL3-202ENST00000344951 SLC8A1P32418 973 aa16.31■□□□□ 0.2
CUL3-202ENST00000344951 C2orf54Q08AI8 447 aa16.31■□□□□ 0.2
CUL3-202ENST00000344951 COG4Q9H9E3 785 aa16.31■□□□□ 0.2
CUL3-202ENST00000344951 KIAA0232Q92628 1395 aa16.31■□□□□ 0.2
CUL3-202ENST00000344951 KCTD17Q8N5Z5 321 aa16.31■□□□□ 0.2
CUL3-202ENST00000344951 TRIML1Q8N9V2 468 aa16.31■□□□□ 0.2
CUL3-202ENST00000344951 YIPF2Q9BWQ6 316 aa16.31■□□□□ 0.2
CUL3-202ENST00000344951 USP17L12C9JPN9 530 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 USP17L21D6R901 530 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 TCP1P17987 556 aaKnown RBP16.3■□□□□ 0.2
CUL3-202ENST00000344951 CAPRIN1Q14444 709 aaKnown RBP16.3■□□□□ 0.2
CUL3-202ENST00000344951 TRIM67Q6ZTA4 783 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 HIPK4Q8NE63 616 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 MEIS1O00470 390 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 FBXO11Q86XK2 927 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 ANKRD36BP1Q96IX9 119 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 NEUROG2Q9H2A3 272 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 HOMER3Q9NSC5 361 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 CLIC2O15247 247 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 DAB2P98082 770 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 TFAMQ00059 246 aaKnown RBP16.3■□□□□ 0.2
CUL3-202ENST00000344951 HSPH1Q92598 858 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 TRIM4Q9C037 500 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 CLCN6P51797 869 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 NUDCD3Q8IVD9 361 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 ZSCAN10Q96SZ4 725 aaPredicted RBP16.3■□□□□ 0.2
CUL3-202ENST00000344951 GTPBP10A4D1E9 387 aaKnown RBP16.3■□□□□ 0.2
CUL3-202ENST00000344951 BASP1P80723 227 aaKnown RBP16.3■□□□□ 0.2
CUL3-202ENST00000344951 FAM133BQ5BKY9 247 aaKnown RBP16.3■□□□□ 0.2
CUL3-202ENST00000344951 DARS2Q6PI48 645 aaKnown RBP16.3■□□□□ 0.2
CUL3-202ENST00000344951 BLIDQ8IZY5 108 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 NCLNQ969V3 563 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 TEKT2Q9UIF3 430 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 PHLPP2Q6ZVD8 1323 aa16.3■□□□□ 0.2
CUL3-202ENST00000344951 PI4K2BG5E9Z4 385 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 ALDH1B1P30837 517 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 NSFP46459 744 aaKnown RBP16.29■□□□□ 0.2
CUL3-202ENST00000344951 SLCO1A2P46721 670 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 ZC3H12BQ5HYM0 836 aaKnown RBP16.29■□□□□ 0.2
CUL3-202ENST00000344951 SNX19Q92543 992 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 MAST1Q9Y2H9 1570 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 KCNQ3O43525 872 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 GTPBP6O43824 516 aaPredicted RBP16.29■□□□□ 0.2
CUL3-202ENST00000344951 SRGAP2BP0DMP2 458 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 PDE6BP35913 854 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 KIF19Q2TAC6 998 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 BBS5Q8N3I7 341 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 TMCO5AQ8N6Q1 288 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 DEPDC1BQ8WUY9 529 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 ZFYVE19Q96K21 471 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 EHHADHQ08426 723 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 FAM160B1Q5W0V3 765 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 KCTD6Q8NC69 237 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 GLT8D2Q9H1C3 349 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 MYL3P08590 195 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 PMLP29590 882 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 POLR2BP30876 1174 aaKnown RBP16.29■□□□□ 0.2
CUL3-202ENST00000344951 ADAM9Q13443 819 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 SMYD4Q8IYR2 804 aaPredicted RBP16.29■□□□□ 0.2
CUL3-202ENST00000344951 GCNAQ96QF7 691 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 RPAINQ86UA6 219 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 RNF168Q8IYW5 571 aaPredicted RBP16.29■□□□□ 0.2
CUL3-202ENST00000344951 AFF4Q9UHB7 1163 aaKnown RBP16.29■□□□□ 0.2
CUL3-202ENST00000344951 HNRNPDLO14979 420 aaKnown RBP16.29■□□□□ 0.2
CUL3-202ENST00000344951 BCAMP50895 628 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 LRRC41Q15345 812 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 IFNL3Q8IZI9 196 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 LZTS2Q9BRK4 669 aa16.29■□□□□ 0.2
CUL3-202ENST00000344951 SARS2Q9NP81 518 aaKnown RBP16.29■□□□□ 0.2
CUL3-202ENST00000344951 EEF1DP29692 281 aaKnown RBP16.28■□□□□ 0.2
CUL3-202ENST00000344951 E2F5Q15329 346 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 DCAF4L1Q3SXM0 396 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 CALN1Q9BXU9 219 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 PARD6BQ9BYG5 372 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 NRBP2Q9NSY0 501 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 SOWAHDA6NJG2 315 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 KRT10P13645 584 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 ELF1P32519 619 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 TTC25Q96NG3 672 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 PCDHA5Q9Y5H7 936 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 KDM3AQ9Y4C1 1321 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 SHANK2Q9UPX8 1470 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 ATP8B1O43520 1251 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 PSMD2Q13200 908 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 ANKRD20A4Q4UJ75 823 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 ANKRD20A8PQ5CZ79 823 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 ANKRD20A2Q5SQ80 823 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 ANKRD20A1Q5TYW2 823 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 FANCBQ8NB91 859 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 MRPL11Q9Y3B7 192 aaKnown RBP16.28■□□□□ 0.2
CUL3-202ENST00000344951 DAAM1Q9Y4D1 1078 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 MROH5Q6ZUA9 1318 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 PTPRTO14522 1441 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 GDF11O95390 407 aa16.28■□□□□ 0.2
CUL3-202ENST00000344951 MOCS3O95396 460 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms