RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 FILIP1Q7Z7B0 1213 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 GLIS3Q8NEA6 775 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 TAF1DQ9H5J8 278 aaPredicted RBP15.22■□□□□ 0.03
CDC42-202ENST00000344548 RGL1Q9NZL6 768 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 PTPRFP10586 1907 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 RPTORQ8N122 1335 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 SPDYE16A6NNV3 312 aaPredicted RBP15.22■□□□□ 0.03
CDC42-202ENST00000344548 GHRHRQ02643 423 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 CYP4A11Q02928 519 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 KCNB1Q14721 858 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 SV2BQ7L1I2 683 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 APTXQ7Z2E3 356 aaKnown RBP15.22■□□□□ 0.03
CDC42-202ENST00000344548 GIMAP8Q8ND71 665 aaPredicted RBP15.22■□□□□ 0.03
CDC42-202ENST00000344548 CACTINQ8WUQ7 758 aaKnown RBP15.22■□□□□ 0.03
CDC42-202ENST00000344548 FAM20AQ96MK3 541 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 WDR11Q9BZH6 1224 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 STK17AQ9UEE5 414 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 DACH1Q9UI36 760 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 PYCARDQ9ULZ3 195 aa15.22■□□□□ 0.03
CDC42-202ENST00000344548 SYNRGQ9UMZ2 1314 aa15.21■□□□□ 0.03
CDC42-202ENST00000344548 NPHP3-ACAD11A0A0J9YXS1 232 aa15.21■□□□□ 0.03
CDC42-202ENST00000344548 PPP1R12BO60237 982 aaPredicted RBP15.21■□□□□ 0.03
CDC42-202ENST00000344548 PSMD10O75832 226 aa15.21■□□□□ 0.03
CDC42-202ENST00000344548 CACNB1Q02641 598 aaPredicted RBP15.21■□□□□ 0.03
CDC42-202ENST00000344548 PDE4DQ08499 809 aa15.21■□□□□ 0.03
CDC42-202ENST00000344548 SH3D19Q5HYK7 790 aa15.21■□□□□ 0.03
CDC42-202ENST00000344548 SNRNP48Q6IEG0 339 aaKnown RBP15.21■□□□□ 0.03
CDC42-202ENST00000344548 NSMFQ6X4W1 530 aa15.21■□□□□ 0.03
CDC42-202ENST00000344548 OTOP1Q7RTM1 612 aa15.21■□□□□ 0.03
CDC42-202ENST00000344548 ADSSL1Q8N142 457 aa15.21■□□□□ 0.03
CDC42-202ENST00000344548 KIAA0895Q8NCT3 520 aa15.21■□□□□ 0.03
CDC42-202ENST00000344548 DDX12PQ92771 950 aa15.21■□□□□ 0.03
CDC42-202ENST00000344548 OTUD5Q96G74 571 aa15.21■□□□□ 0.03
CDC42-202ENST00000344548 PKD2L1Q9P0L9 805 aa15.21■□□□□ 0.03
CDC42-202ENST00000344548 EIF2AK2P19525 551 aaKnown RBP15.2■□□□□ 0.02
CDC42-202ENST00000344548 UBASH3AP57075 661 aa15.2■□□□□ 0.02
CDC42-202ENST00000344548 SPATA1Q5VX52 437 aa15.2■□□□□ 0.02
CDC42-202ENST00000344548 NELFBQ8WX92 580 aa15.2■□□□□ 0.02
CDC42-202ENST00000344548 DNAJC19Q96DA6 116 aa15.2■□□□□ 0.02
CDC42-202ENST00000344548 EEF2KMTQ96G04 330 aa15.2■□□□□ 0.02
CDC42-202ENST00000344548 R3HDMLQ9H3Y0 253 aa15.2■□□□□ 0.02
CDC42-202ENST00000344548 MAGEF1Q9HAY2 307 aa15.2■□□□□ 0.02
CDC42-202ENST00000344548 RNF146Q9NTX7 359 aa15.2■□□□□ 0.02
CDC42-202ENST00000344548 TMOD4Q9NZQ9 345 aa15.2■□□□□ 0.02
CDC42-202ENST00000344548 ZBTB39O15060 712 aa15.2■□□□□ 0.02
CDC42-202ENST00000344548 CHMP2AO43633 222 aa15.2■□□□□ 0.02
CDC42-202ENST00000344548 SERPINC1P01008 464 aa15.2■□□□□ 0.02
CDC42-202ENST00000344548 MYL1P05976 194 aa15.2■□□□□ 0.02
CDC42-202ENST00000344548 BAATQ14032 418 aaPredicted RBP15.2■□□□□ 0.02
CDC42-202ENST00000344548 SLC5A5Q92911 643 aa15.2■□□□□ 0.02
CDC42-202ENST00000344548 BCAS3Q9H6U6 928 aa15.2■□□□□ 0.02
CDC42-202ENST00000344548 RMND1Q9NWS8 449 aa15.2■□□□□ 0.02
CDC42-202ENST00000344548 TRAF5O00463 557 aa15.19■□□□□ 0.02
CDC42-202ENST00000344548 SSBP05455 408 aaKnown RBP eCLIP15.19■□□□□ 0.02
CDC42-202ENST00000344548 TPM4P67936 248 aa15.19■□□□□ 0.02
CDC42-202ENST00000344548 RAD51AP2Q09MP3 1159 aa15.19■□□□□ 0.02
CDC42-202ENST00000344548 ARSHQ5FYA8 562 aa15.19■□□□□ 0.02
CDC42-202ENST00000344548 CDKAL1Q5VV42 579 aa15.19■□□□□ 0.02
CDC42-202ENST00000344548 MXRA8Q9BRK3 442 aa15.19■□□□□ 0.02
CDC42-202ENST00000344548 FGFBP2Q9BYJ0 223 aa15.19■□□□□ 0.02
CDC42-202ENST00000344548 POLD4Q9HCU8 107 aa15.19■□□□□ 0.02
CDC42-202ENST00000344548 SLC39A2Q9NP94 309 aa15.19■□□□□ 0.02
CDC42-202ENST00000344548 WRAP73Q9P2S5 460 aaPredicted RBP15.19■□□□□ 0.02
CDC42-202ENST00000344548 CSADQ9Y600 493 aa15.19■□□□□ 0.02
CDC42-202ENST00000344548 PLA2G4BP0C869 781 aa15.19■□□□□ 0.02
CDC42-202ENST00000344548 PAK1Q13153 545 aa15.19■□□□□ 0.02
CDC42-202ENST00000344548 LRCH2Q5VUJ6 765 aa15.19■□□□□ 0.02
CDC42-202ENST00000344548 RNF207Q6ZRF8 634 aa15.19■□□□□ 0.02
CDC42-202ENST00000344548 MCF2L2Q86YR7 1114 aa15.19■□□□□ 0.02
CDC42-202ENST00000344548 ZC3H15Q8WU90 426 aaKnown RBP15.19■□□□□ 0.02
CDC42-202ENST00000344548 EIF2AK1Q9BQI3 630 aaKnown RBP15.19■□□□□ 0.02
CDC42-202ENST00000344548 RWDD2AQ9UIY3 292 aa15.19■□□□□ 0.02
CDC42-202ENST00000344548 CTDP1Q9Y5B0 961 aaPredicted RBP15.19■□□□□ 0.02
CDC42-202ENST00000344548 NKRFO15226 690 aaKnown RBP eCLIP15.18■□□□□ 0.027e-7■□□□□ 10.1
CDC42-202ENST00000344548 IDEP14735 1019 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 MSNP26038 577 aaKnown RBP15.18■□□□□ 0.02
CDC42-202ENST00000344548 RPA1P27694 616 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 SLC12A3P55017 1021 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 CTTNQ14247 550 aaKnown RBP15.18■□□□□ 0.02
CDC42-202ENST00000344548 PGM5Q15124 567 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 TMC6Q7Z403 805 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 IRF2BP1Q8IU81 584 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 ZNF577Q9BSK1 485 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 UNC45AQ9H3U1 944 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 KCNH7Q9NS40 1196 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 RBBP6Q7Z6E9 1792 aaKnown RBP15.18■□□□□ 0.02
CDC42-202ENST00000344548 DDX39AO00148 427 aaKnown RBP15.18■□□□□ 0.02
CDC42-202ENST00000344548 TEX33O43247 280 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 CDK11BP21127 795 aaKnown RBP15.18■□□□□ 0.02
CDC42-202ENST00000344548 AMPD3Q01432 767 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 EHHADHQ08426 723 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 GOLGA8FQ08AF8 430 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 GOLGA8DPQ0D2H9 430 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 PABPC4Q13310 644 aaKnown RBP eCLIP15.18■□□□□ 0.022e-10■□□□□ 9.8
CDC42-202ENST00000344548 TTLL12Q14166 644 aaPredicted RBP15.18■□□□□ 0.02
CDC42-202ENST00000344548 PLS1Q14651 629 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 MAP1SQ66K74 1059 aaPredicted RBP15.18■□□□□ 0.02
CDC42-202ENST00000344548 B3GNT9Q6UX72 402 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 TEX2Q8IWB9 1127 aa15.18■□□□□ 0.02
CDC42-202ENST00000344548 RMDN3Q96TC7 470 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms