RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 NUDCD3Q8IVD9 361 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 PCDHA13Q9Y5I0 950 aa13.17□□□□□ -0.3
SEMA6A-202ENST00000343348 UBN2Q6ZU65 1347 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 MCF2LO15068 1137 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 TLR3O15455 904 aaKnown RBP13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 HNRNPH2P55795 449 aaKnown RBP13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 FAM98CQ17RN3 349 aaKnown RBP13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 ZBTB33Q86T24 672 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 GSPT2Q8IYD1 628 aaKnown RBP13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 NT5C1BQ96P26 610 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 TLR7Q9NYK1 1049 aaKnown RBP13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 GCNT4Q9P109 453 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 NFU1Q9UMS0 254 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 SYCP2Q9BX26 1530 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 EXOC1LA0A1B0GW35 172 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 TMEM232C9JQI7 657 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 PGRMC1O00264 195 aaKnown RBP13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 EIF4A3P38919 411 aaKnown RBP13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 ZC3H18Q86VM9 953 aaKnown RBP13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 ZNF496Q96IT1 587 aaPredicted RBP13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 ZMAT2Q96NC0 199 aaKnown RBP13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 TADA3O75528 432 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 CYP27A1Q02318 531 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 TTLL7Q6ZT98 887 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 PCGF5Q86SE9 256 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 HSPH1Q92598 858 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 NBPF3Q9H094 633 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 CCPG1Q9ULG6 757 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 AKT3Q9Y243 479 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 JRKLQ9Y4A0 524 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 PHLPP2Q6ZVD8 1323 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 BTDP43251 543 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 CASP8Q14790 479 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 ANGPTL8Q6UXH0 198 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 UNC5CLQ8IV45 518 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 MRPL11Q9Y3B7 192 aaKnown RBP13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 SRGAP2O75044 1071 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 PSMC2P35998 433 aaKnown RBP13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 SLC16A2P36021 539 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 HSPA2P54652 639 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 SULF1Q8IWU6 871 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 DRC3Q9H069 523 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 TXLNGQ9NUQ3 528 aa13.16□□□□□ -0.3
SEMA6A-202ENST00000343348 CD58P19256 250 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 EIF4A1P60842 406 aaKnown RBP13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 ARID5BQ14865 1188 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 SCARA5Q6ZMJ2 495 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 LARP4BQ92615 738 aaKnown RBP13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 P2RX5Q93086 422 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 TRAIPQ9BWF2 469 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 NPR1P16066 1061 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 TTC30BQ8N4P2 665 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 GINM1Q9NU53 330 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 NXF1Q9UBU9 619 aaKnown RBP13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 CAPN11Q9UMQ6 739 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 hCG_2014768A0A024R1R8 64 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 LMNB2Q03252 620 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 THOC5Q13769 683 aaKnown RBP13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 FAM186BQ8IYM0 893 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 ZWILCHQ9H900 591 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 MLXIPLQ9NP71 852 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 A0A087WUV0 522 aaPredicted RBP13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 H3BRJ5 948 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 CDO1Q16878 200 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 TRIM59Q8IWR1 403 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 SUPT20HQ8NEM7 779 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 USP44Q9H0E7 712 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 SFMBT1Q9UHJ3 866 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 TLK1Q9UKI8 766 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 DUOX2Q9NRD8 1548 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 RGS12O14924 1447 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 KIF19Q2TAC6 998 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 RFX8Q6ZV50 586 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 MAP7D3Q8IWC1 876 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 SPDYE1Q8NFV5 336 aaPredicted RBP13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 ZNF577Q9BSK1 485 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 ZMYND12Q9H0C1 365 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 UGGT2Q9NYU1 1516 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 SUCLA2Q9P2R7 463 aaPredicted RBP13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 SUFUQ9UMX1 484 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 PCDHA1Q9Y5I3 950 aa13.15□□□□□ -0.3
SEMA6A-202ENST00000343348 A0A0G2JND7 137 aa13.15□□□□□ -0.31
SEMA6A-202ENST00000343348 NUGGCQ68CJ6 796 aa13.15□□□□□ -0.31
SEMA6A-202ENST00000343348 TRIML2Q8N7C3 387 aa13.15□□□□□ -0.31
SEMA6A-202ENST00000343348 SEPT8Q92599 483 aa13.15□□□□□ -0.31
SEMA6A-202ENST00000343348 LSG1Q9H089 658 aaKnown RBP13.15□□□□□ -0.31
SEMA6A-202ENST00000343348 SCINQ9Y6U3 715 aa13.15□□□□□ -0.31
SEMA6A-202ENST00000343348 F5H423 210 aaPredicted RBP13.14□□□□□ -0.31
SEMA6A-202ENST00000343348 NR5A1Q13285 461 aa13.14□□□□□ -0.31
SEMA6A-202ENST00000343348 ZNF589Q86UQ0 364 aaPredicted RBP13.14□□□□□ -0.31
SEMA6A-202ENST00000343348 NIM1KQ8IY84 436 aa13.14□□□□□ -0.31
SEMA6A-202ENST00000343348 TDRD7Q8NHU6 1098 aaKnown RBP13.14□□□□□ -0.31
SEMA6A-202ENST00000343348 ANKRD36BP1Q96IX9 119 aa13.14□□□□□ -0.31
SEMA6A-202ENST00000343348 FMO2Q99518 471 aa13.14□□□□□ -0.31
SEMA6A-202ENST00000343348 PI4K2BG5E9Z4 385 aa13.14□□□□□ -0.31
SEMA6A-202ENST00000343348 RASGRF2O14827 1237 aa13.14□□□□□ -0.31
SEMA6A-202ENST00000343348 SMAD1Q15797 465 aaKnown RBP13.14□□□□□ -0.31
SEMA6A-202ENST00000343348 FBXO38Q6PIJ6 1188 aa13.14□□□□□ -0.31
SEMA6A-202ENST00000343348 ANGPTL2Q9UKU9 493 aa13.14□□□□□ -0.31
SEMA6A-202ENST00000343348 DDIT3P35638 169 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms