RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 PLS1Q14651 629 aa23.79■■□□□ 1.4
VRK2-201ENST00000340157 PGM5Q15124 567 aa23.79■■□□□ 1.4
VRK2-201ENST00000340157 PCNX4Q63HM2 1172 aa23.79■■□□□ 1.4
VRK2-201ENST00000340157 NCAPH2Q6IBW4 605 aa23.79■■□□□ 1.4
VRK2-201ENST00000340157 POTEBQ6S5H4 581 aa23.79■■□□□ 1.4
VRK2-201ENST00000340157 SARM1Q6SZW1 724 aa23.79■■□□□ 1.4
VRK2-201ENST00000340157 LARP4BQ92615 738 aaKnown RBP23.79■■□□□ 1.4
VRK2-201ENST00000340157 C7orf25Q9BPX7 421 aa23.79■■□□□ 1.4
VRK2-201ENST00000340157 PXMP2Q9NR77 195 aa23.79■■□□□ 1.4
VRK2-201ENST00000340157 AGTPBP1Q9UPW5 1226 aa23.79■■□□□ 1.4
VRK2-201ENST00000340157 PPP1R3GB7ZBB8 358 aa23.78■■□□□ 1.4
VRK2-201ENST00000340157 MYL5Q02045 173 aa23.78■■□□□ 1.4
VRK2-201ENST00000340157 ASCC2Q9H1I8 757 aaPredicted RBP23.78■■□□□ 1.4
VRK2-201ENST00000340157 UBIAD1Q9Y5Z9 338 aa23.78■■□□□ 1.4
VRK2-201ENST00000340157 SPATA31C1P0DKV0 1188 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 SETQ01105 290 aaPredicted RBP23.77■■□□□ 1.4
VRK2-201ENST00000340157 DHX8Q14562 1220 aaKnown RBP23.77■■□□□ 1.4
VRK2-201ENST00000340157 TKFCQ3LXA3 575 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 KMT5BQ4FZB7 885 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 OTOP1Q7RTM1 612 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 RMDN3Q96TC7 470 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 PDCD2LQ9BRP1 358 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 ACAD9Q9H845 621 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 A1CFQ9NQ94 594 aaKnown RBP23.77■■□□□ 1.4
VRK2-201ENST00000340157 KDM3AQ9Y4C1 1321 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 KIAA1217Q5T5P2 1943 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 MYMKA6NI61 221 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 SMTNL1A8MU46 457 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 KCNB1Q14721 858 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 LRCH2Q5VUJ6 765 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 GPAT2Q6NUI2 795 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 CATSPER3Q86XQ3 398 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 WDR11Q9BZH6 1224 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 CYP39A1Q9NYL5 469 aa23.77■■□□□ 1.4
VRK2-201ENST00000340157 SLC26A4O43511 780 aa23.76■■□□□ 1.39
VRK2-201ENST00000340157 BCRP11274 1271 aa23.76■■□□□ 1.39
VRK2-201ENST00000340157 ZNF75DP51815 510 aa23.76■■□□□ 1.39
VRK2-201ENST00000340157 ZNF658Q5TYW1 1059 aaPredicted RBP23.76■■□□□ 1.39
VRK2-201ENST00000340157 SV2BQ7L1I2 683 aa23.76■■□□□ 1.39
VRK2-201ENST00000340157 NIPA1Q7RTP0 329 aa23.76■■□□□ 1.39
VRK2-201ENST00000340157 TRMT44Q8IYL2 757 aaKnown RBP23.76■■□□□ 1.39
VRK2-201ENST00000340157 NMRK2Q9NPI5 230 aa23.76■■□□□ 1.39
VRK2-201ENST00000340157 DACH1Q9UI36 760 aa23.76■■□□□ 1.39
VRK2-201ENST00000340157 KIAA1024Q9UPX6 916 aa23.76■■□□□ 1.39
VRK2-201ENST00000340157 GDAQ9Y2T3 454 aa23.76■■□□□ 1.39
VRK2-201ENST00000340157 CNMDO75829 334 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 IRX3P78415 501 aaPredicted RBP23.75■■□□□ 1.39
VRK2-201ENST00000340157 PPP2R5CQ13362 524 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 B3GNT9Q6UX72 402 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 ZNF577Q9BSK1 485 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 NT5C3AQ9H0P0 336 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 RMND1Q9NWS8 449 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 POTEFA5A3E0 1075 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 E9PMD0 336 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 RHOBTB3O94955 611 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 RPA1P27694 616 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 HERVK_113P62684 666 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 HAUS3Q68CZ6 603 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 POTEGQ6S5H5 508 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 MB21D1Q8N884 522 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 ENOX1Q8TC92 643 aaKnown RBP23.75■■□□□ 1.39
VRK2-201ENST00000340157 SLC10A4Q96EP9 437 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 TRIM5Q9C035 493 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 KCNH7Q9NS40 1196 aa23.75■■□□□ 1.39
VRK2-201ENST00000340157 IPO5O00410 1097 aaKnown RBP23.74■■□□□ 1.39
VRK2-201ENST00000340157 ATP1A3P13637 1013 aa23.74■■□□□ 1.39
VRK2-201ENST00000340157 ERCC5P28715 1186 aaPredicted RBP23.74■■□□□ 1.39
VRK2-201ENST00000340157 JADE2Q9NQC1 790 aa23.74■■□□□ 1.39
VRK2-201ENST00000340157 UNCXA6NJT0 531 aa23.73■■□□□ 1.39
VRK2-201ENST00000340157 GAS7O60861 476 aa23.73■■□□□ 1.39
VRK2-201ENST00000340157 ASIC1P78348 528 aa23.73■■□□□ 1.39
VRK2-201ENST00000340157 AMPD3Q01432 767 aa23.73■■□□□ 1.39
VRK2-201ENST00000340157 ARHGEF16Q5VV41 709 aa23.73■■□□□ 1.39
VRK2-201ENST00000340157 RIOX2Q8IUF8 465 aa23.73■■□□□ 1.39
VRK2-201ENST00000340157 ERMNQ8TAM6 284 aa23.73■■□□□ 1.39
VRK2-201ENST00000340157 EIF2AK1Q9BQI3 630 aaKnown RBP23.73■■□□□ 1.39
VRK2-201ENST00000340157 FANCLQ9NW38 375 aa23.73■■□□□ 1.39
VRK2-201ENST00000340157 CT47A1Q5JQC4 288 aaPredicted RBP23.73■■□□□ 1.39
VRK2-201ENST00000340157 KLHL10Q6JEL2 608 aa23.73■■□□□ 1.39
VRK2-201ENST00000340157 CNNM4Q6P4Q7 775 aa23.73■■□□□ 1.39
VRK2-201ENST00000340157 FASTKD5Q7L8L6 764 aaKnown RBP23.73■■□□□ 1.39
VRK2-201ENST00000340157 CHST13Q8NET6 341 aa23.73■■□□□ 1.39
VRK2-201ENST00000340157 SPATC1LQ9H0A9 340 aa23.73■■□□□ 1.39
VRK2-201ENST00000340157 UNC45AQ9H3U1 944 aa23.73■■□□□ 1.39
VRK2-201ENST00000340157 R3HDMLQ9H3Y0 253 aa23.73■■□□□ 1.39
VRK2-201ENST00000340157 AGO4Q9HCK5 861 aaKnown RBP23.73■■□□□ 1.39
VRK2-201ENST00000340157 TXNRD2Q9NNW7 524 aa23.73■■□□□ 1.39
VRK2-201ENST00000340157 DHX15O43143 795 aaKnown RBP23.72■■□□□ 1.39
VRK2-201ENST00000340157 MYCLP12524 364 aaPredicted RBP23.72■■□□□ 1.39
VRK2-201ENST00000340157 PSMC6P62333 389 aa23.72■■□□□ 1.39
VRK2-201ENST00000340157 ITGB3BPQ13352 177 aaPredicted RBP23.72■■□□□ 1.39
VRK2-201ENST00000340157 SNAPC2Q13487 334 aa23.72■■□□□ 1.39
VRK2-201ENST00000340157 HSD17B14Q9BPX1 270 aa23.72■■□□□ 1.39
VRK2-201ENST00000340157 POLR3CQ9BUI4 534 aaPredicted RBP23.72■■□□□ 1.39
VRK2-201ENST00000340157 GBA2Q9HCG7 927 aaPredicted RBP23.72■■□□□ 1.39
VRK2-201ENST00000340157 RGL1Q9NZL6 768 aa23.72■■□□□ 1.39
VRK2-201ENST00000340157 CHMP2AO43633 222 aa23.71■■□□□ 1.39
VRK2-201ENST00000340157 PRCPP42785 496 aa23.71■■□□□ 1.39
VRK2-201ENST00000340157 CYP4A11Q02928 519 aa23.71■■□□□ 1.39
VRK2-201ENST00000340157 VSIG10LQ86VR7 867 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms