RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 DNAJC19Q96DA6 116 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 CCDC17Q96LX7 622 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 EHD4Q9H223 541 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 ARHGAP20Q9P2F6 1191 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 ATF5Q9Y2D1 282 aaPredicted RBP16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 KDM3AQ9Y4C1 1321 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 H3BQF6 201 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 ZNF263O14978 683 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 PLEKP08567 350 aaPredicted RBP16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 MCM3P25205 808 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 USP14P54578 494 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 COASYQ13057 564 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 HYIQ5T013 277 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 TAF3Q5VWG9 929 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 IFIH1Q9BYX4 1025 aaKnown RBP16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 DEF6Q9H4E7 631 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 SUGCTQ9HAC7 445 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 PDE11AQ9HCR9 933 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 KIF11P52732 1056 aa16.7■□□□□ 0.26
TNFSF13-201ENST00000338784 FKBP3Q00688 224 aaKnown RBP16.7■□□□□ 0.26
TNFSF13-201ENST00000338784 KRT26Q7Z3Y9 468 aa16.7■□□□□ 0.26
TNFSF13-201ENST00000338784 GLIS3Q8NEA6 775 aa16.7■□□□□ 0.26
TNFSF13-201ENST00000338784 TRIM58Q8NG06 486 aa16.7■□□□□ 0.26
TNFSF13-201ENST00000338784 GJA10Q969M2 543 aa16.7■□□□□ 0.26
TNFSF13-201ENST00000338784 CAPZA3Q96KX2 299 aa16.7■□□□□ 0.26
TNFSF13-201ENST00000338784 PANK4Q9NVE7 773 aa16.7■□□□□ 0.26
TNFSF13-201ENST00000338784 BCCIPQ9P287 314 aaKnown RBP eCLIP16.7■□□□□ 0.26
TNFSF13-201ENST00000338784 PCDHA13Q9Y5I0 950 aa16.7■□□□□ 0.26
TNFSF13-201ENST00000338784 NRXN2Q9P2S2 1712 aa16.7■□□□□ 0.26
TNFSF13-201ENST00000338784 LRRC53A6NM62 1247 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 G3V3G9 751 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 LCA5LO95447 670 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 NFIAQ12857 509 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 CASP8Q14790 479 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 FAM26FQ5R3K3 315 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 DCAF8Q5TAQ9 597 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 RRAGAQ7L523 313 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 EDEM3Q9BZQ6 932 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 TANGO6Q9C0B7 1094 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 JADE2Q9NQC1 790 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 AKR1B10O60218 316 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 TACC1O75410 805 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 SSBP05455 408 aaKnown RBP eCLIP16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 NPR1P16066 1061 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 EIF4A3P38919 411 aaKnown RBP16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 USP11P51784 963 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 ZCWPW2Q504Y3 356 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 NEK11Q8NG66 645 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 CAGE1Q8TC20 777 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 JRKLQ9Y4A0 524 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 COL4A3BPQ9Y5P4 624 aa16.69■□□□□ 0.26
TNFSF13-201ENST00000338784 TARSL2A2RTX5 802 aaKnown RBP16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 USP17L15C9J2P7 530 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 USP17L13C9JLJ4 530 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 USP17L11C9JVI0 530 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 USP17L18D6R9N7 530 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 USP17L22D6RA61 530 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 USP17L17D6RBQ6 530 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 USP17L19D6RCP7 530 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 USP17L20D6RJB6 530 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 TRAF5O00463 557 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 RAD21O60216 631 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 ALDH1B1P30837 517 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 USP17L24Q0WX57 530 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 QRICH1Q2TAL8 776 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 IQCEQ6IPM2 695 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 USP17L6PQ6QN14 398 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 ARHGAP27Q6ZUM4 889 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 BAP1Q92560 729 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 TMX4Q9H1E5 349 aaPredicted RBP16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 SH2D4AQ9H788 454 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 KIAA1024Q9UPX6 916 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 PCDHA1Q9Y5I3 950 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 E9PMD0 336 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 SLC26A4O43511 780 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 ERCC3P19447 782 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 SLC1A4P43007 532 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 CRKP46108 304 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 CCDC40Q4G0X9 1142 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 CACNA2D4Q7Z3S7 1137 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 ZFPM1Q8IX07 1006 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 CCDC65Q8IXS2 484 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 TXLNBQ8N3L3 684 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 DCAF4Q8WV16 495 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 MKL1Q969V6 931 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 DNAJC18Q9H819 358 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 KCNMB3Q9NPA1 279 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 ADAM21Q9UKJ8 722 aa16.68■□□□□ 0.26
TNFSF13-201ENST00000338784 QSER1Q2KHR3 1735 aa16.67■□□□□ 0.26
TNFSF13-201ENST00000338784 RGPD3A6NKT7 1758 aaPredicted RBP16.67■□□□□ 0.26
TNFSF13-201ENST00000338784 RGPD4Q7Z3J3 1758 aa16.67■□□□□ 0.26
TNFSF13-201ENST00000338784 PLA2G4BP0C869 781 aa16.67■□□□□ 0.26
TNFSF13-201ENST00000338784 MAP9Q49MG5 647 aa16.67■□□□□ 0.26
TNFSF13-201ENST00000338784 PDXDC1Q6P996 788 aa16.67■□□□□ 0.26
TNFSF13-201ENST00000338784 EXOC4Q96A65 974 aa16.67■□□□□ 0.26
TNFSF13-201ENST00000338784 CEP63Q96MT8 703 aa16.67■□□□□ 0.26
TNFSF13-201ENST00000338784 ANO3Q9BYT9 981 aa16.67■□□□□ 0.26
TNFSF13-201ENST00000338784 DHX36Q9H2U1 1008 aaKnown RBP16.67■□□□□ 0.26
TNFSF13-201ENST00000338784 ACBD3Q9H3P7 528 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms