RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 VAV3Q9UKW4 847 aa18.14■□□□□ 0.49
SCNN1A-202ENST00000338748 PAXBP1Q9Y5B6 917 aa18.14■□□□□ 0.49
SCNN1A-202ENST00000338748 GJA3Q9Y6H8 435 aa18.14■□□□□ 0.49
SCNN1A-202ENST00000338748 B4DLN1 442 aa18.13■□□□□ 0.49
SCNN1A-202ENST00000338748 MEIS1O00470 390 aa18.13■□□□□ 0.49
SCNN1A-202ENST00000338748 PSMC6P62333 389 aa18.13■□□□□ 0.49
SCNN1A-202ENST00000338748 COASYQ13057 564 aa18.13■□□□□ 0.49
SCNN1A-202ENST00000338748 TRIM65Q6PJ69 517 aa18.13■□□□□ 0.49
SCNN1A-202ENST00000338748 CATSPER3Q86XQ3 398 aa18.13■□□□□ 0.49
SCNN1A-202ENST00000338748 CHURC1Q8WUH1 139 aa18.13■□□□□ 0.49
SCNN1A-202ENST00000338748 FEZ1Q99689 392 aa18.13■□□□□ 0.49
SCNN1A-202ENST00000338748 A0A0U1RQJ8 604 aa18.13■□□□□ 0.49
SCNN1A-202ENST00000338748 PES1O00541 588 aaKnown RBP18.13■□□□□ 0.49
SCNN1A-202ENST00000338748 PLA2G4BP0C869 781 aa18.13■□□□□ 0.49
SCNN1A-202ENST00000338748 SPATA31C1P0DKV0 1188 aa18.13■□□□□ 0.49
SCNN1A-202ENST00000338748 ZNF710Q8N1W2 664 aa18.13■□□□□ 0.49
SCNN1A-202ENST00000338748 MB21D1Q8N884 522 aa18.13■□□□□ 0.49
SCNN1A-202ENST00000338748 ATRIPQ8WXE1 791 aa18.13■□□□□ 0.49
SCNN1A-202ENST00000338748 NT5C3AQ9H0P0 336 aa18.13■□□□□ 0.49
SCNN1A-202ENST00000338748 BICDL2A1A5D9 508 aa18.12■□□□□ 0.49
SCNN1A-202ENST00000338748 CTIFO43310 598 aaKnown RBP18.12■□□□□ 0.49
SCNN1A-202ENST00000338748 CYP3A4P08684 503 aa18.12■□□□□ 0.49
SCNN1A-202ENST00000338748 MCTP2Q6DN12 878 aa18.12■□□□□ 0.49
SCNN1A-202ENST00000338748 LDHDQ86WU2 507 aa18.12■□□□□ 0.49
SCNN1A-202ENST00000338748 NLGN2Q8NFZ4 835 aa18.12■□□□□ 0.49
SCNN1A-202ENST00000338748 AGBL1Q96MI9 1066 aa18.12■□□□□ 0.49
SCNN1A-202ENST00000338748 TUBGCP2Q9BSJ2 902 aa18.12■□□□□ 0.49
SCNN1A-202ENST00000338748 SH2D4AQ9H788 454 aa18.12■□□□□ 0.49
SCNN1A-202ENST00000338748 HACL1Q9UJ83 578 aa18.12■□□□□ 0.49
SCNN1A-202ENST00000338748 ZNF536O15090 1300 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 ZNF541Q9H0D2 1346 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 EML1O00423 815 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 TBX3O15119 743 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 CYP11B2P19099 503 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 SLC12A3P55017 1021 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 ARSHQ5FYA8 562 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 KIF18AQ8NI77 898 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 ABHD10Q9NUJ1 306 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 TBC1D7Q9P0N9 293 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 FEM1BQ9UK73 627 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 PLA2G6O60733 806 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 RPS12P25398 132 aaKnown RBP18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 PTGER2P43116 358 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 KLK7P49862 253 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 CYP4A11Q02928 519 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 NAA30Q147X3 362 aaPredicted RBP18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 MIIPQ5JXC2 388 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 FAM160B2Q86V87 743 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 GPBP1Q86WP2 473 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 CNGA4Q8IV77 575 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 GUF1Q8N442 669 aaKnown RBP18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 MRPL44Q9H9J2 332 aaKnown RBP18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 MAGEC2Q9UBF1 373 aaPredicted RBP18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 CNOT7Q9UIV1 285 aaKnown RBP18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 FZD1Q9UP38 647 aa18.11■□□□□ 0.49
SCNN1A-202ENST00000338748 GCOM1H8Y6P7 765 aaPredicted RBP18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 FZD9O00144 591 aa18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 POLR2MP0CAP2 368 aa18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 ZNF76P36508 570 aa18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 ERVK-24P63145 666 aa18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 NBPF12Q5TAG4 269 aaPredicted RBP18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 NOC3LQ8WTT2 800 aaKnown RBP18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 DEFB129Q9H1M3 183 aa18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 PANK4Q9NVE7 773 aa18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 TTC26A0AVF1 554 aa18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 ERCC3P19447 782 aa18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 FECHP22830 423 aa18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 ETF1P62495 437 aaKnown RBP18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 PRAMEF18Q5VWM3 479 aa18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 HAUS3Q68CZ6 603 aa18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 FAM20AQ96MK3 541 aa18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 PCDHA2Q9Y5H9 948 aa18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.1■□□□□ 0.49
SCNN1A-202ENST00000338748 RASSF10A6NK89 507 aa18.09■□□□□ 0.49
SCNN1A-202ENST00000338748 KIF2AO00139 706 aaPredicted RBP18.09■□□□□ 0.49
SCNN1A-202ENST00000338748 RPA1P27694 616 aa18.09■□□□□ 0.49
SCNN1A-202ENST00000338748 PPP1R2P41236 205 aa18.09■□□□□ 0.49
SCNN1A-202ENST00000338748 PABPC4Q13310 644 aaKnown RBP eCLIP18.09■□□□□ 0.49
SCNN1A-202ENST00000338748 TNFAIP1Q13829 316 aa18.09■□□□□ 0.49
SCNN1A-202ENST00000338748 FAM26FQ5R3K3 315 aa18.09■□□□□ 0.49
SCNN1A-202ENST00000338748 LRRC55Q6ZSA7 311 aa18.09■□□□□ 0.49
SCNN1A-202ENST00000338748 RGL1Q9NZL6 768 aa18.09■□□□□ 0.49
SCNN1A-202ENST00000338748 RBBP6Q7Z6E9 1792 aaKnown RBP18.09■□□□□ 0.49
SCNN1A-202ENST00000338748 LTBP3Q9NS15 1303 aa18.09■□□□□ 0.49
SCNN1A-202ENST00000338748 NFIBO00712 420 aa18.08■□□□□ 0.49
SCNN1A-202ENST00000338748 CCP110O43303 1012 aa18.08■□□□□ 0.49
SCNN1A-202ENST00000338748 ZSCAN12O43309 604 aa18.08■□□□□ 0.49
SCNN1A-202ENST00000338748 KRT9P35527 623 aa18.08■□□□□ 0.49
SCNN1A-202ENST00000338748 CCDC125Q86Z20 511 aa18.08■□□□□ 0.49
SCNN1A-202ENST00000338748 GTPBP4Q9BZE4 634 aaKnown RBP18.08■□□□□ 0.49
SCNN1A-202ENST00000338748 LRRC27Q9C0I9 530 aa18.08■□□□□ 0.49
SCNN1A-202ENST00000338748 COL20A1Q9P218 1284 aa18.08■□□□□ 0.49
SCNN1A-202ENST00000338748 DNAI1Q9UI46 699 aa18.08■□□□□ 0.49
SCNN1A-202ENST00000338748 MRPL11Q9Y3B7 192 aaKnown RBP18.08■□□□□ 0.49
SCNN1A-202ENST00000338748 CD2APQ9Y5K6 639 aa18.08■□□□□ 0.49
SCNN1A-202ENST00000338748 A0A1W2PQC6 194 aa18.08■□□□□ 0.48
SCNN1A-202ENST00000338748 MTIF2P46199 727 aaKnown RBP18.08■□□□□ 0.48
SCNN1A-202ENST00000338748 KIF4BQ2VIQ3 1234 aa18.08■□□□□ 0.48
SCNN1A-202ENST00000338748 BCAS3Q9H6U6 928 aa18.08■□□□□ 0.48
SCNN1A-202ENST00000338748 CCPG1Q9ULG6 757 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms