RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 GADL1Q6ZQY3 521 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 LARP4BQ92615 738 aaKnown RBP17.35■□□□□ 0.37
LIMS1-202ENST00000338045 RAD54LQ92698 747 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 TAAR1Q96RJ0 339 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 UIMC1Q96RL1 719 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 HSD3B7Q9H2F3 369 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 AGTPBP1Q9UPW5 1226 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 ITGB5P18084 799 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 CCT6AP40227 531 aaKnown RBP17.35■□□□□ 0.37
LIMS1-202ENST00000338045 BAATQ14032 418 aaPredicted RBP17.35■□□□□ 0.37
LIMS1-202ENST00000338045 CNNM4Q6P4Q7 775 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 NSMFQ6X4W1 530 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 SV2BQ7L1I2 683 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 KCNK18Q7Z418 384 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 IL31RAQ8NI17 732 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 ACAD9Q9H845 621 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 UBIAD1Q9Y5Z9 338 aa17.35■□□□□ 0.37
LIMS1-202ENST00000338045 RHOBTB3O94955 611 aa17.34■□□□□ 0.37
LIMS1-202ENST00000338045 RPA1P27694 616 aa17.34■□□□□ 0.37
LIMS1-202ENST00000338045 MRPS9P82933 396 aaKnown RBP17.34■□□□□ 0.37
LIMS1-202ENST00000338045 PPP2R5CQ13362 524 aa17.34■□□□□ 0.37
LIMS1-202ENST00000338045 ZNF658Q5TYW1 1059 aaPredicted RBP17.34■□□□□ 0.37
LIMS1-202ENST00000338045 OTOP1Q7RTM1 612 aa17.34■□□□□ 0.37
LIMS1-202ENST00000338045 ENOX1Q8TC92 643 aaKnown RBP17.34■□□□□ 0.37
LIMS1-202ENST00000338045 PDCD2LQ9BRP1 358 aa17.34■□□□□ 0.37
LIMS1-202ENST00000338045 RRAGCQ9HB90 399 aa17.34■□□□□ 0.37
LIMS1-202ENST00000338045 PXMP2Q9NR77 195 aa17.34■□□□□ 0.37
LIMS1-202ENST00000338045 PPP1R3GB7ZBB8 358 aa17.33■□□□□ 0.37
LIMS1-202ENST00000338045 ARP10275 920 aa17.33■□□□□ 0.37
LIMS1-202ENST00000338045 CD44P16070 742 aaKnown RBP17.33■□□□□ 0.37
LIMS1-202ENST00000338045 GJA5P36382 358 aa17.33■□□□□ 0.37
LIMS1-202ENST00000338045 FKBP1BP68106 108 aa17.33■□□□□ 0.37
LIMS1-202ENST00000338045 FMR1Q06787 632 aaKnown RBP eCLIP17.33■□□□□ 0.37
LIMS1-202ENST00000338045 MCM6Q14566 821 aa17.33■□□□□ 0.37
LIMS1-202ENST00000338045 PGM5Q15124 567 aa17.33■□□□□ 0.37
LIMS1-202ENST00000338045 LRCH2Q5VUJ6 765 aa17.33■□□□□ 0.37
LIMS1-202ENST00000338045 B3GNT9Q6UX72 402 aa17.33■□□□□ 0.37
LIMS1-202ENST00000338045 FASTKD5Q7L8L6 764 aaKnown RBP17.33■□□□□ 0.37
LIMS1-202ENST00000338045 CHST13Q8NET6 341 aa17.33■□□□□ 0.37
LIMS1-202ENST00000338045 ERMNQ8TAM6 284 aa17.33■□□□□ 0.37
LIMS1-202ENST00000338045 MED15Q96RN5 788 aa17.33■□□□□ 0.37
LIMS1-202ENST00000338045 RMDN3Q96TC7 470 aa17.33■□□□□ 0.37
LIMS1-202ENST00000338045 ASCC2Q9H1I8 757 aaPredicted RBP17.33■□□□□ 0.37
LIMS1-202ENST00000338045 MED24O75448 989 aa17.33■□□□□ 0.36
LIMS1-202ENST00000338045 SPATA31C1P0DKV0 1188 aa17.33■□□□□ 0.36
LIMS1-202ENST00000338045 ZNF75DP51815 510 aa17.33■□□□□ 0.36
LIMS1-202ENST00000338045 TPM4P67936 248 aa17.33■□□□□ 0.36
LIMS1-202ENST00000338045 KMT5BQ4FZB7 885 aa17.33■□□□□ 0.36
LIMS1-202ENST00000338045 HS1BP3Q53T59 392 aa17.33■□□□□ 0.36
LIMS1-202ENST00000338045 NCAPH2Q6IBW4 605 aa17.33■□□□□ 0.36
LIMS1-202ENST00000338045 XRRA1Q6P2D8 792 aa17.33■□□□□ 0.36
LIMS1-202ENST00000338045 CATSPER3Q86XQ3 398 aa17.33■□□□□ 0.36
LIMS1-202ENST00000338045 KCTD17Q8N5Z5 321 aa17.33■□□□□ 0.36
LIMS1-202ENST00000338045 RIT2Q99578 217 aa17.33■□□□□ 0.36
LIMS1-202ENST00000338045 A1CFQ9NQ94 594 aaKnown RBP17.33■□□□□ 0.36
LIMS1-202ENST00000338045 JADE2Q9NQC1 790 aa17.33■□□□□ 0.36
LIMS1-202ENST00000338045 CYP39A1Q9NYL5 469 aa17.33■□□□□ 0.36
LIMS1-202ENST00000338045 BTBD7Q9P203 1132 aa17.33■□□□□ 0.36
LIMS1-202ENST00000338045 POTEB3A0JP26 581 aa17.32■□□□□ 0.36
LIMS1-202ENST00000338045 EIF2AK2P19525 551 aaKnown RBP17.32■□□□□ 0.36
LIMS1-202ENST00000338045 IRX3P78415 501 aaPredicted RBP17.32■□□□□ 0.36
LIMS1-202ENST00000338045 POTEBQ6S5H4 581 aa17.32■□□□□ 0.36
LIMS1-202ENST00000338045 RIOX2Q8IUF8 465 aa17.32■□□□□ 0.36
LIMS1-202ENST00000338045 HOMEZQ8IX15 550 aa17.32■□□□□ 0.36
LIMS1-202ENST00000338045 TRIM44Q96DX7 344 aaPredicted RBP17.32■□□□□ 0.36
LIMS1-202ENST00000338045 SLC10A4Q96EP9 437 aa17.32■□□□□ 0.36
LIMS1-202ENST00000338045 ZNF577Q9BSK1 485 aa17.32■□□□□ 0.36
LIMS1-202ENST00000338045 POLR3CQ9BUI4 534 aaPredicted RBP17.32■□□□□ 0.36
LIMS1-202ENST00000338045 WDR11Q9BZH6 1224 aa17.32■□□□□ 0.36
LIMS1-202ENST00000338045 TRIM5Q9C035 493 aa17.32■□□□□ 0.36
LIMS1-202ENST00000338045 LRRC27Q9C0I9 530 aa17.32■□□□□ 0.36
LIMS1-202ENST00000338045 KIAA1024Q9UPX6 916 aa17.32■□□□□ 0.36
LIMS1-202ENST00000338045 MYMKA6NI61 221 aa17.31■□□□□ 0.36
LIMS1-202ENST00000338045 IPO5O00410 1097 aaKnown RBP17.31■□□□□ 0.36
LIMS1-202ENST00000338045 EML1O00423 815 aa17.31■□□□□ 0.36
LIMS1-202ENST00000338045 HERVK_113P62684 666 aa17.31■□□□□ 0.36
LIMS1-202ENST00000338045 PLS1Q14651 629 aa17.31■□□□□ 0.36
LIMS1-202ENST00000338045 GPAT2Q6NUI2 795 aa17.31■□□□□ 0.36
LIMS1-202ENST00000338045 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.31■□□□□ 0.36
LIMS1-202ENST00000338045 SMYD4Q8IYR2 804 aaPredicted RBP17.31■□□□□ 0.36
LIMS1-202ENST00000338045 ZFP91Q96JP5 570 aaPredicted RBP17.31■□□□□ 0.36
LIMS1-202ENST00000338045 PURBQ96QR8 312 aaKnown RBP17.31■□□□□ 0.36
LIMS1-202ENST00000338045 KCNH7Q9NS40 1196 aa17.31■□□□□ 0.36
LIMS1-202ENST00000338045 PVALEFA0A1B0GWK0 134 aa17.31■□□□□ 0.36
LIMS1-202ENST00000338045 GAS7O60861 476 aa17.31■□□□□ 0.36
LIMS1-202ENST00000338045 PABPC4Q13310 644 aaKnown RBP eCLIP17.31■□□□□ 0.36
LIMS1-202ENST00000338045 SNAPC2Q13487 334 aa17.31■□□□□ 0.36
LIMS1-202ENST00000338045 ARHGEF16Q5VV41 709 aa17.31■□□□□ 0.36
LIMS1-202ENST00000338045 GIMAP8Q8ND71 665 aaPredicted RBP17.31■□□□□ 0.36
LIMS1-202ENST00000338045 MRFAP1L1Q96HT8 127 aa17.31■□□□□ 0.36
LIMS1-202ENST00000338045 HSD17B14Q9BPX1 270 aa17.31■□□□□ 0.36
LIMS1-202ENST00000338045 GTPBP4Q9BZE4 634 aaKnown RBP17.31■□□□□ 0.36
LIMS1-202ENST00000338045 ZNF408Q9H9D4 720 aa17.31■□□□□ 0.36
LIMS1-202ENST00000338045 CNMDO75829 334 aa17.3■□□□□ 0.36
LIMS1-202ENST00000338045 CDC25BP30305 580 aa17.3■□□□□ 0.36
LIMS1-202ENST00000338045 ASIC1P78348 528 aa17.3■□□□□ 0.36
LIMS1-202ENST00000338045 VSIG10LQ86VR7 867 aa17.3■□□□□ 0.36
LIMS1-202ENST00000338045 NSUN6Q8TEA1 469 aaKnown RBP17.3■□□□□ 0.36
LIMS1-202ENST00000338045 CCDC47Q96A33 483 aaKnown RBP17.3■□□□□ 0.36
LIMS1-202ENST00000338045 EIF2AK1Q9BQI3 630 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms