RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 CASP8Q14790 479 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 TEDDM1Q5T9Z0 273 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 TPH2Q8IWU9 490 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 LRRC59Q96AG4 307 aaKnown RBP8.69□□□□□ -1.02
TNPO1-201ENST00000337273 PCDHA4Q9UN74 947 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 PZPP20742 1482 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 APOEP02649 317 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 YARSP54577 528 aaKnown RBP8.69□□□□□ -1.02
TNPO1-201ENST00000337273 PTGDRQ13258 359 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 DYNC1I2Q13409 638 aaKnown RBP8.69□□□□□ -1.02
TNPO1-201ENST00000337273 ASPRV1Q53RT3 343 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 HP1BP3Q5SSJ5 553 aaPredicted RBP8.69□□□□□ -1.02
TNPO1-201ENST00000337273 CCDC17Q96LX7 622 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 PTPRTO14522 1441 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 WDR91A4D1P6 747 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 CASP1P29466 404 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 CTSWP56202 376 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 PTH1RQ03431 593 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 RBL2Q08999 1139 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.69□□□□□ -1.02
TNPO1-201ENST00000337273 NT5C1BQ96P26 610 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 SLFN14P0C7P3 912 aa8.69□□□□□ -1.02
TNPO1-201ENST00000337273 CFBP00751 764 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 DYDC2Q96IM9 177 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 TOM1O60784 492 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 VSTM4Q8IW00 320 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 PNMA1Q8ND90 353 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 ADAM33Q9BZ11 813 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 MYL7Q01449 175 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 RASSF7Q02833 373 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 TOGARAM2Q6ZUX3 1019 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 UPF3AQ9H1J1 476 aaKnown RBP8.68□□□□□ -1.02
TNPO1-201ENST00000337273 ANLNQ9NQW6 1124 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 TNKSO95271 1327 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 AATKQ6ZMQ8 1374 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 MCF2LO15068 1137 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 HNRNPCL1O60812 293 aaKnown RBP8.68□□□□□ -1.02
TNPO1-201ENST00000337273 POLR2MP0CAP2 368 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 SGO2Q562F6 1265 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 SRPRBQ9Y5M8 271 aaKnown RBP8.68□□□□□ -1.02
TNPO1-201ENST00000337273 ECE1P42892 770 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 HNRNPH2P55795 449 aaKnown RBP8.68□□□□□ -1.02
TNPO1-201ENST00000337273 PDE1BQ01064 536 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 ZNF710Q8N1W2 664 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 KCTD17Q8N5Z5 321 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 K7ENM7 598 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 NNTQ13423 1086 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 GRAMD1AQ96CP6 724 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 KLRF2D3W0D1 207 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 NDUFA10O95299 355 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 SURF1Q15526 300 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 TAF11Q15544 211 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 MMS22LQ6ZRQ5 1243 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 ZBTB38Q8NAP3 1195 aaPredicted RBP8.68□□□□□ -1.02
TNPO1-201ENST00000337273 LSG1Q9H089 658 aaKnown RBP8.68□□□□□ -1.02
TNPO1-201ENST00000337273 TMOD1P28289 359 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 DRP2Q13474 957 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 TCIRG1Q13488 830 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 RSBN1LQ6PCB5 846 aaPredicted RBP8.68□□□□□ -1.02
TNPO1-201ENST00000337273 PIP4K2CQ8TBX8 421 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 PARD6BQ9BYG5 372 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 XAB2Q9HCS7 855 aaKnown RBP8.68□□□□□ -1.02
TNPO1-201ENST00000337273 DONSONQ9NYP3 566 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 STOML1Q9UBI4 398 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 MIF4GDA9UHW6 222 aaKnown RBP8.68□□□□□ -1.02
TNPO1-201ENST00000337273 SGK1O00141 431 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 SCP2P22307 547 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 ORC2Q13416 577 aaPredicted RBP8.68□□□□□ -1.02
TNPO1-201ENST00000337273 KRT80Q6KB66 452 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 ZNF449Q6P9G9 518 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 PPM1KQ8N3J5 372 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 SPDL1Q96EA4 605 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 TMEM60Q9H2L4 133 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 NOD1Q9Y239 953 aa8.68□□□□□ -1.02
TNPO1-201ENST00000337273 MYCLP12524 364 aaPredicted RBP8.67□□□□□ -1.02
TNPO1-201ENST00000337273 MX2P20592 715 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 EHHADHQ08426 723 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 SCRN1Q12765 414 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 TERF2Q15554 542 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 FBXW10Q5XX13 1052 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 PPWD1Q96BP3 646 aaKnown RBP8.67□□□□□ -1.02
TNPO1-201ENST00000337273 USP44Q9H0E7 712 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 NHEJ1Q9H9Q4 299 aaPredicted RBP8.67□□□□□ -1.02
TNPO1-201ENST00000337273 SMARCAL1Q9NZC9 954 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 BCS1LQ9Y276 419 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 INPP5FQ9Y2H2 1132 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 FGAP02671 866 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 TMEM191BP0C7N4 346 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 LINC00301Q8NCQ3 95 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 CCDC138Q96M89 665 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 TTC25Q96NG3 672 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 WDR11Q9BZH6 1224 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 NOC2LQ9Y3T9 749 aaKnown RBP8.67□□□□□ -1.02
TNPO1-201ENST00000337273 PCDHA5Q9Y5H7 936 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 SKAP2O75563 359 aaPredicted RBP8.67□□□□□ -1.02
TNPO1-201ENST00000337273 S100BP04271 92 aaPredicted RBP8.67□□□□□ -1.02
TNPO1-201ENST00000337273 ESRRAP11474 423 aaPredicted RBP8.67□□□□□ -1.02
TNPO1-201ENST00000337273 TFDP1Q14186 410 aa8.67□□□□□ -1.02
TNPO1-201ENST00000337273 TRMT2AQ8IZ69 625 aaKnown RBP8.67□□□□□ -1.02
TNPO1-201ENST00000337273 MXD3Q9BW11 206 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms