RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 UIMC1Q96RL1 719 aa25.92■■□□□ 1.74
NDEL1-201ENST00000334527 CALCOCO1Q9P1Z2 691 aa25.92■■□□□ 1.74
NDEL1-201ENST00000334527 CAPN6Q9Y6Q1 641 aa25.92■■□□□ 1.74
NDEL1-201ENST00000334527 PDE2AO00408 941 aaPredicted RBP25.91■■□□□ 1.74
NDEL1-201ENST00000334527 TACC1O75410 805 aa25.91■■□□□ 1.74
NDEL1-201ENST00000334527 CCDC155Q8N6L0 562 aa25.91■■□□□ 1.74
NDEL1-201ENST00000334527 BAP1Q92560 729 aa25.91■■□□□ 1.74
NDEL1-201ENST00000334527 MLXIPQ9HAP2 919 aa25.91■■□□□ 1.74
NDEL1-201ENST00000334527 SPATA31A6Q5VVP1 1343 aa25.91■■□□□ 1.74
NDEL1-201ENST00000334527 KDM3AQ9Y4C1 1321 aa25.91■■□□□ 1.74
NDEL1-201ENST00000334527 TARSL2A2RTX5 802 aaKnown RBP25.91■■□□□ 1.74
NDEL1-201ENST00000334527 LCA5LO95447 670 aa25.91■■□□□ 1.74
NDEL1-201ENST00000334527 ZCWPW2Q504Y3 356 aa25.91■■□□□ 1.74
NDEL1-201ENST00000334527 FAM26FQ5R3K3 315 aa25.91■■□□□ 1.74
NDEL1-201ENST00000334527 FOXR2Q6PJQ5 311 aa25.91■■□□□ 1.74
NDEL1-201ENST00000334527 NT5C3AQ9H0P0 336 aa25.91■■□□□ 1.74
NDEL1-201ENST00000334527 BMP2KQ9NSY1 1161 aaPredicted RBP25.91■■□□□ 1.74
NDEL1-201ENST00000334527 ATF5Q9Y2D1 282 aaPredicted RBP25.91■■□□□ 1.74
NDEL1-201ENST00000334527 JRKLQ9Y4A0 524 aa25.91■■□□□ 1.74
NDEL1-201ENST00000334527 ARFGEF1Q9Y6D6 1849 aa25.91■■□□□ 1.74
NDEL1-201ENST00000334527 RAD21O60216 631 aa25.9■■□□□ 1.74
NDEL1-201ENST00000334527 CACNA2D4Q7Z3S7 1137 aa25.9■■□□□ 1.74
NDEL1-201ENST00000334527 SNX12Q9UMY4 172 aa25.9■■□□□ 1.74
NDEL1-201ENST00000334527 COL4A3BPQ9Y5P4 624 aa25.9■■□□□ 1.74
NDEL1-201ENST00000334527 TRAF5O00463 557 aa25.9■■□□□ 1.74
NDEL1-201ENST00000334527 FKBP3Q00688 224 aaKnown RBP25.9■■□□□ 1.74
NDEL1-201ENST00000334527 HYIQ5T013 277 aa25.9■■□□□ 1.74
NDEL1-201ENST00000334527 CCDC102AQ96A19 550 aa25.9■■□□□ 1.74
NDEL1-201ENST00000334527 ACBD3Q9H3P7 528 aa25.9■■□□□ 1.74
NDEL1-201ENST00000334527 TBC1D7Q9P0N9 293 aa25.9■■□□□ 1.74
NDEL1-201ENST00000334527 GREB1LQ9C091 1923 aaPredicted RBP25.9■■□□□ 1.74
NDEL1-201ENST00000334527 USP17L15C9J2P7 530 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 USP17L13C9JLJ4 530 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 USP17L11C9JVI0 530 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 USP17L18D6R9N7 530 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 USP17L22D6RA61 530 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 USP17L17D6RBQ6 530 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 USP17L19D6RCP7 530 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 USP17L20D6RJB6 530 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 E9PMD0 336 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 MOCS3O95396 460 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 USP17L24Q0WX57 530 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 NFIAQ12857 509 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 MAP9Q49MG5 647 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 CCDC40Q4G0X9 1142 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 PDXDC1Q6P996 788 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 USP17L6PQ6QN14 398 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 TEKT1Q969V4 418 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 DRC1Q96MC2 740 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 NAP1L4Q99733 375 aaKnown RBP25.89■■□□□ 1.74
NDEL1-201ENST00000334527 KIAA1024Q9UPX6 916 aa25.89■■□□□ 1.74
NDEL1-201ENST00000334527 HNRNPH2P55795 449 aaKnown RBP25.89■■□□□ 1.73
NDEL1-201ENST00000334527 HSP90B2PQ58FF3 399 aa25.89■■□□□ 1.73
NDEL1-201ENST00000334527 SLC27A3Q5K4L6 730 aa25.89■■□□□ 1.73
NDEL1-201ENST00000334527 MEX3CQ5U5Q3 659 aaKnown RBP25.89■■□□□ 1.73
NDEL1-201ENST00000334527 APOBEC3HQ6NTF7 200 aaKnown RBP25.89■■□□□ 1.73
NDEL1-201ENST00000334527 FGFBP2Q9BYJ0 223 aa25.89■■□□□ 1.73
NDEL1-201ENST00000334527 PSD3Q9NYI0 1048 aa25.89■■□□□ 1.73
NDEL1-201ENST00000334527 FAN1Q9Y2M0 1017 aa25.89■■□□□ 1.73
NDEL1-201ENST00000334527 EP400Q96L91 3159 aa25.88■■□□□ 1.73
NDEL1-201ENST00000334527 LMAN1P49257 510 aa25.88■■□□□ 1.73
NDEL1-201ENST00000334527 C2orf54Q08AI8 447 aa25.88■■□□□ 1.73
NDEL1-201ENST00000334527 KCNMA1Q12791 1236 aa25.88■■□□□ 1.73
NDEL1-201ENST00000334527 IQCEQ6IPM2 695 aa25.88■■□□□ 1.73
NDEL1-201ENST00000334527 HHIPL2Q6UWX4 724 aa25.88■■□□□ 1.73
NDEL1-201ENST00000334527 TNNT3P45378 269 aaPredicted RBP25.88■■□□□ 1.73
NDEL1-201ENST00000334527 QRICH1Q2TAL8 776 aa25.88■■□□□ 1.73
NDEL1-201ENST00000334527 ZFPM1Q8IX07 1006 aa25.88■■□□□ 1.73
NDEL1-201ENST00000334527 EDEM3Q9BZQ6 932 aa25.88■■□□□ 1.73
NDEL1-201ENST00000334527 POTEB3A0JP26 581 aa25.87■■□□□ 1.73
NDEL1-201ENST00000334527 POTECB2RU33 542 aa25.87■■□□□ 1.73
NDEL1-201ENST00000334527 ZMYND10O75800 440 aa25.87■■□□□ 1.73
NDEL1-201ENST00000334527 PLA2G4BP0C869 781 aa25.87■■□□□ 1.73
NDEL1-201ENST00000334527 MAGEA1P43355 309 aa25.87■■□□□ 1.73
NDEL1-201ENST00000334527 POTEBQ6S5H4 581 aa25.87■■□□□ 1.73
NDEL1-201ENST00000334527 CCDC65Q8IXS2 484 aa25.87■■□□□ 1.73
NDEL1-201ENST00000334527 G3V3G9 751 aa25.87■■□□□ 1.73
NDEL1-201ENST00000334527 ONECUT3O60422 494 aaPredicted RBP25.87■■□□□ 1.73
NDEL1-201ENST00000334527 DCAF8Q5TAQ9 597 aa25.87■■□□□ 1.73
NDEL1-201ENST00000334527 CREG2Q8IUH2 290 aa25.87■■□□□ 1.73
NDEL1-201ENST00000334527 NELFCDQ8IXH7 590 aa25.87■■□□□ 1.73
NDEL1-201ENST00000334527 CCDC17Q96LX7 622 aa25.87■■□□□ 1.73
NDEL1-201ENST00000334527 ALS2CR12Q96Q35 445 aa25.87■■□□□ 1.73
NDEL1-201ENST00000334527 PCDHA1Q9Y5I3 950 aa25.87■■□□□ 1.73
NDEL1-201ENST00000334527 ANKRD31Q8N7Z5 1873 aa25.86■■□□□ 1.73
NDEL1-201ENST00000334527 NPHP3-ACAD11A0A0J9YXS1 232 aa25.86■■□□□ 1.73
NDEL1-201ENST00000334527 CACNB1Q02641 598 aaPredicted RBP25.86■■□□□ 1.73
NDEL1-201ENST00000334527 GPBP1Q86WP2 473 aa25.86■■□□□ 1.73
NDEL1-201ENST00000334527 FAM71BQ8TC56 605 aa25.86■■□□□ 1.73
NDEL1-201ENST00000334527 GLT8D2Q9H1C3 349 aa25.86■■□□□ 1.73
NDEL1-201ENST00000334527 EHD4Q9H223 541 aa25.86■■□□□ 1.73
NDEL1-201ENST00000334527 DNAJC18Q9H819 358 aa25.86■■□□□ 1.73
NDEL1-201ENST00000334527 NLRC4Q9NPP4 1024 aa25.86■■□□□ 1.73
NDEL1-201ENST00000334527 GFPT1Q06210 699 aaPredicted RBP25.85■■□□□ 1.73
NDEL1-201ENST00000334527 CEP63Q96MT8 703 aa25.85■■□□□ 1.73
NDEL1-201ENST00000334527 VIPAS39Q9H9C1 493 aa25.85■■□□□ 1.73
NDEL1-201ENST00000334527 FAM196BA6NMK8 535 aa25.85■■□□□ 1.73
NDEL1-201ENST00000334527 ASTE1Q2TB18 679 aaPredicted RBP25.85■■□□□ 1.73
NDEL1-201ENST00000334527 COG1Q8WTW3 980 aa25.85■■□□□ 1.73
NDEL1-201ENST00000334527 ANO3Q9BYT9 981 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms