RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 SLC9C1Q4G0N8 1177 aa26.05■■□□□ 1.76
TSKU-201ENST00000333090 CEP89Q96ST8 783 aa26.05■■□□□ 1.76
TSKU-201ENST00000333090 C6orf50Q9HD87 102 aa26.05■■□□□ 1.76
TSKU-201ENST00000333090 MEFVO15553 781 aaPredicted RBP26.05■■□□□ 1.76
TSKU-201ENST00000333090 LRRC63Q05C16 580 aa26.05■■□□□ 1.76
TSKU-201ENST00000333090 ZNF444Q8N0Y2 327 aaPredicted RBP26.05■■□□□ 1.76
TSKU-201ENST00000333090 CASKIN2Q8WXE0 1202 aa26.05■■□□□ 1.76
TSKU-201ENST00000333090 PIK3R5Q8WYR1 880 aa26.05■■□□□ 1.76
TSKU-201ENST00000333090 COL14A1Q05707 1796 aaKnown RBP26.05■■□□□ 1.76
TSKU-201ENST00000333090 ABCB11O95342 1321 aa26.05■■□□□ 1.76
TSKU-201ENST00000333090 KCNMA1Q12791 1236 aa26.04■■□□□ 1.76
TSKU-201ENST00000333090 SWT1Q5T5J6 900 aaKnown RBP26.04■■□□□ 1.76
TSKU-201ENST00000333090 NAA35Q5VZE5 725 aa26.04■■□□□ 1.76
TSKU-201ENST00000333090 EPN3Q9H201 632 aa26.04■■□□□ 1.76
TSKU-201ENST00000333090 VAT1LQ9HCJ6 419 aa26.04■■□□□ 1.76
TSKU-201ENST00000333090 BIN2Q9UBW5 565 aaPredicted RBP26.04■■□□□ 1.76
TSKU-201ENST00000333090 SCN7AQ01118 1682 aa26.04■■□□□ 1.76
TSKU-201ENST00000333090 PVALEFA0A1B0GWK0 134 aa26.04■■□□□ 1.76
TSKU-201ENST00000333090 GNA11P29992 359 aa26.04■■□□□ 1.76
TSKU-201ENST00000333090 FAM98CQ17RN3 349 aaKnown RBP26.04■■□□□ 1.76
TSKU-201ENST00000333090 KIAA1551Q9HCM1 1747 aa26.03■■□□□ 1.76
TSKU-201ENST00000333090 MYO1FO00160 1098 aa26.03■■□□□ 1.76
TSKU-201ENST00000333090 KLRC1P26715 233 aa26.03■■□□□ 1.76
TSKU-201ENST00000333090 EHHADHQ08426 723 aa26.03■■□□□ 1.76
TSKU-201ENST00000333090 ENOX2Q16206 610 aaKnown RBP26.03■■□□□ 1.76
TSKU-201ENST00000333090 NCAPGQ9BPX3 1015 aa26.03■■□□□ 1.76
TSKU-201ENST00000333090 GEMIN8Q9NWZ8 242 aaKnown RBP26.03■■□□□ 1.76
TSKU-201ENST00000333090 SRP68Q9UHB9 627 aaKnown RBP26.03■■□□□ 1.76
TSKU-201ENST00000333090 ROBO1Q9Y6N7 1651 aa26.03■■□□□ 1.76
TSKU-201ENST00000333090 TLR2O60603 784 aa26.03■■□□□ 1.76
TSKU-201ENST00000333090 USP8P40818 1118 aa26.03■■□□□ 1.76
TSKU-201ENST00000333090 ARID5AQ03989 594 aa26.03■■□□□ 1.76
TSKU-201ENST00000333090 SF3B3Q15393 1217 aaKnown RBP26.03■■□□□ 1.76
TSKU-201ENST00000333090 SOGA3Q5TF21 947 aa26.03■■□□□ 1.76
TSKU-201ENST00000333090 SFMBT2Q5VUG0 894 aa26.03■■□□□ 1.76
TSKU-201ENST00000333090 MAATS1Q7Z4T9 603 aa26.03■■□□□ 1.76
TSKU-201ENST00000333090 CNPY4Q8N129 248 aa26.03■■□□□ 1.76
TSKU-201ENST00000333090 PNMA5Q96PV4 448 aa26.03■■□□□ 1.76
TSKU-201ENST00000333090 PPP1R37O75864 691 aa26.02■■□□□ 1.76
TSKU-201ENST00000333090 SEC24CP53992 1094 aa26.02■■□□□ 1.76
TSKU-201ENST00000333090 TSG101Q99816 390 aa26.02■■□□□ 1.76
TSKU-201ENST00000333090 RBAK-RBAKDNI3L0D1 243 aa26.02■■□□□ 1.76
TSKU-201ENST00000333090 FAM83BQ5T0W9 1011 aa26.02■■□□□ 1.76
TSKU-201ENST00000333090 PRPF38AQ8NAV1 312 aaKnown RBP26.02■■□□□ 1.76
TSKU-201ENST00000333090 TBC1D5Q92609 795 aa26.02■■□□□ 1.76
TSKU-201ENST00000333090 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.02■■□□□ 1.76
TSKU-201ENST00000333090 STK17AQ9UEE5 414 aa26.02■■□□□ 1.76
TSKU-201ENST00000333090 ZNF652Q9Y2D9 606 aa26.02■■□□□ 1.76
TSKU-201ENST00000333090 POLR2FP61218 127 aaKnown RBP26.01■■□□□ 1.76
TSKU-201ENST00000333090 TBC1D9BQ66K14 1250 aa26.01■■□□□ 1.76
TSKU-201ENST00000333090 MREGQ8N565 214 aa26.01■■□□□ 1.76
TSKU-201ENST00000333090 ATP6V1G3Q96LB4 118 aa26.01■■□□□ 1.76
TSKU-201ENST00000333090 EDEM3Q9BZQ6 932 aa26.01■■□□□ 1.76
TSKU-201ENST00000333090 LUC7LQ9NQ29 371 aaKnown RBP26.01■■□□□ 1.76
TSKU-201ENST00000333090 EP400Q96L91 3159 aa26.01■■□□□ 1.75
TSKU-201ENST00000333090 POTEMA6NI47 508 aa26.01■■□□□ 1.75
TSKU-201ENST00000333090 SERPING1P05155 500 aa26.01■■□□□ 1.75
TSKU-201ENST00000333090 PPARDQ03181 441 aa26.01■■□□□ 1.75
TSKU-201ENST00000333090 CALCRLQ16602 461 aa26.01■■□□□ 1.75
TSKU-201ENST00000333090 CCDC40Q4G0X9 1142 aa26.01■■□□□ 1.75
TSKU-201ENST00000333090 SPATS2Q86XZ4 545 aaKnown RBP26.01■■□□□ 1.75
TSKU-201ENST00000333090 KLHL7Q8IXQ5 586 aa26.01■■□□□ 1.75
TSKU-201ENST00000333090 ZNF473Q8WTR7 871 aaKnown RBP26.01■■□□□ 1.75
TSKU-201ENST00000333090 DDX12PQ92771 950 aa26.01■■□□□ 1.75
TSKU-201ENST00000333090 ATXN2Q99700 1313 aaKnown RBP26.01■■□□□ 1.75
TSKU-201ENST00000333090 CENPHQ9H3R5 247 aa26.01■■□□□ 1.75
TSKU-201ENST00000333090 TMEM260Q9NX78 707 aa26.01■■□□□ 1.75
TSKU-201ENST00000333090 CEP72Q9P209 647 aa26.01■■□□□ 1.75
TSKU-201ENST00000333090 NAB2Q15742 525 aa26.01■■□□□ 1.75
TSKU-201ENST00000333090 PTGISQ16647 500 aa26.01■■□□□ 1.75
TSKU-201ENST00000333090 CEP85LQ5SZL2 805 aa26.01■■□□□ 1.75
TSKU-201ENST00000333090 SH3RF3Q8TEJ3 882 aaPredicted RBP26.01■■□□□ 1.75
TSKU-201ENST00000333090 HPDP32754 393 aaPredicted RBP26■■□□□ 1.75
TSKU-201ENST00000333090 USP17L2Q6R6M4 530 aa26■■□□□ 1.75
TSKU-201ENST00000333090 MICALCLQ6ZW33 695 aa26■■□□□ 1.75
TSKU-201ENST00000333090 REXO1Q8N1G1 1221 aaKnown RBP26■■□□□ 1.75
TSKU-201ENST00000333090 GPATCH11Q8N954 259 aa26■■□□□ 1.75
TSKU-201ENST00000333090 WHAMMQ8TF30 809 aa26■■□□□ 1.75
TSKU-201ENST00000333090 LZTS2Q9BRK4 669 aa26■■□□□ 1.75
TSKU-201ENST00000333090 LSM14BQ9BX40 385 aaKnown RBP26■■□□□ 1.75
TSKU-201ENST00000333090 SPZ1Q9BXG8 430 aa26■■□□□ 1.75
TSKU-201ENST00000333090 SEC63Q9UGP8 760 aaKnown RBP26■■□□□ 1.75
TSKU-201ENST00000333090 PLAAQ9Y263 795 aa26■■□□□ 1.75
TSKU-201ENST00000333090 TRAF5O00463 557 aa26■■□□□ 1.75
TSKU-201ENST00000333090 RAD51CO43502 376 aa26■■□□□ 1.75
TSKU-201ENST00000333090 NOL4O94818 638 aa26■■□□□ 1.75
TSKU-201ENST00000333090 FNTAP49354 379 aa26■■□□□ 1.75
TSKU-201ENST00000333090 KIAA0753Q2KHM9 967 aa26■■□□□ 1.75
TSKU-201ENST00000333090 RNF187Q5TA31 235 aaPredicted RBP26■■□□□ 1.75
TSKU-201ENST00000333090 CD302Q8IX05 232 aa26■■□□□ 1.75
TSKU-201ENST00000333090 INPP4AQ96PE3 977 aaPredicted RBP26■■□□□ 1.75
TSKU-201ENST00000333090 KANSL2Q9H9L4 492 aa26■■□□□ 1.75
TSKU-201ENST00000333090 HLTFQ14527 1009 aaKnown RBP eCLIP25.99■■□□□ 1.75
TSKU-201ENST00000333090 CDC37Q16543 378 aaPredicted RBP25.99■■□□□ 1.75
TSKU-201ENST00000333090 CCDC91Q7Z6B0 441 aa25.99■■□□□ 1.75
TSKU-201ENST00000333090 AMIGO3Q86WK7 504 aa25.99■■□□□ 1.75
TSKU-201ENST00000333090 CCT8L2Q96SF2 557 aa25.99■■□□□ 1.75
TSKU-201ENST00000333090 MYCBPQ99417 103 aaPredicted RBP25.99■■□□□ 1.75
TSKU-201ENST00000333090 PACSIN1Q9BY11 444 aa25.99■■□□□ 1.75
TSKU-201ENST00000333090 COL4A3BPQ9Y5P4 624 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms