RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 ADALQ6DHV7 355 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 C4orf32Q8N8J7 132 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 FAM200AQ8TCP9 573 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 MXRA8Q9BRK3 442 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 JADE2Q9NQC1 790 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 RNF186Q9NXI6 227 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 FAM237AA0A1B0GTK4 181 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 NEMFO60524 1076 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 NR3C2P08235 984 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 MUTP22033 750 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 HOXA13P31271 388 aaPredicted RBP10.72□□□□□ -0.69
C11orf54-201ENST00000331239 LONP1P36776 959 aaKnown RBP10.72□□□□□ -0.69
C11orf54-201ENST00000331239 FXR2P51116 673 aaKnown RBP eCLIP10.72□□□□□ -0.69
C11orf54-201ENST00000331239 ALDH5A1P51649 535 aaPredicted RBP10.72□□□□□ -0.69
C11orf54-201ENST00000331239 TYRO3Q06418 890 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 EARS2Q5JPH6 523 aaKnown RBP10.72□□□□□ -0.69
C11orf54-201ENST00000331239 SLC30A10Q6XR72 485 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 KRI1Q8N9T8 703 aaKnown RBP10.72□□□□□ -0.69
C11orf54-201ENST00000331239 TBC1D5Q92609 795 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 MTMR9Q96QG7 549 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 TAAR1Q96RJ0 339 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 RIT2Q99578 217 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 TNMDQ9H2S6 317 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 KCNMB3Q9NPA1 279 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 HOMER2Q9NSB8 354 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 DACT1Q9NYF0 836 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 TFIP11Q9UBB9 837 aaKnown RBP10.72□□□□□ -0.69
C11orf54-201ENST00000331239 DDX25Q9UHL0 483 aaKnown RBP10.72□□□□□ -0.69
C11orf54-201ENST00000331239 CCNT1O60563 726 aaKnown RBP10.72□□□□□ -0.69
C11orf54-201ENST00000331239 AOC2O75106 756 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 OR52Z1P0C646 297 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 ZNF76P36508 570 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 RGS2P41220 211 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 SP3Q02447 781 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 MAP2K5Q13163 448 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 FCHSD1Q86WN1 690 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 RDM1Q8NG50 284 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 RASGRP4Q8TDF6 673 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 ERO1AQ96HE7 468 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 INPP4AQ96PE3 977 aaPredicted RBP10.72□□□□□ -0.69
C11orf54-201ENST00000331239 SENP7Q9BQF6 1050 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 NUDT12Q9BQG2 462 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 TBC1D22BQ9NU19 505 aa10.72□□□□□ -0.69
C11orf54-201ENST00000331239 HSP90AA2PQ14568 343 aaPredicted RBP10.71□□□□□ -0.69
C11orf54-201ENST00000331239 TMEM266Q2M3C6 531 aa10.71□□□□□ -0.69
C11orf54-201ENST00000331239 LETM2Q2VYF4 491 aa10.71□□□□□ -0.69
C11orf54-201ENST00000331239 PORCNQ9H237 461 aa10.71□□□□□ -0.69
C11orf54-201ENST00000331239 CLSTN2Q9H4D0 955 aa10.71□□□□□ -0.69
C11orf54-201ENST00000331239 VTA1Q9NP79 307 aa10.71□□□□□ -0.69
C11orf54-201ENST00000331239 COL20A1Q9P218 1284 aa10.71□□□□□ -0.69
C11orf54-201ENST00000331239 CPA4Q9UI42 421 aa10.71□□□□□ -0.69
C11orf54-201ENST00000331239 PCDHB6Q9Y5E3 794 aa10.71□□□□□ -0.69
C11orf54-201ENST00000331239 NFASCO94856 1347 aa10.71□□□□□ -0.7
C11orf54-201ENST00000331239 KIAA1217Q5T5P2 1943 aa10.71□□□□□ -0.7
C11orf54-201ENST00000331239 IGLV3-22A0A075B6J6 115 aa10.71□□□□□ -0.7
C11orf54-201ENST00000331239 RBM47A0AV96 593 aaKnown RBP10.71□□□□□ -0.7
C11orf54-201ENST00000331239 EDIL3O43854 480 aa10.71□□□□□ -0.7
C11orf54-201ENST00000331239 IGHA2P01877 340 aa10.71□□□□□ -0.7
C11orf54-201ENST00000331239 CMA1P23946 247 aa10.71□□□□□ -0.7
C11orf54-201ENST00000331239 LACTBP83111 547 aaPredicted RBP10.71□□□□□ -0.7
C11orf54-201ENST00000331239 PTGDRQ13258 359 aa10.71□□□□□ -0.7
C11orf54-201ENST00000331239 CAMK4Q16566 473 aa10.71□□□□□ -0.7
C11orf54-201ENST00000331239 CALCRLQ16602 461 aa10.71□□□□□ -0.7
C11orf54-201ENST00000331239 DTHD1Q6ZMT9 781 aa10.71□□□□□ -0.7
C11orf54-201ENST00000331239 RBM43Q6ZSC3 357 aaKnown RBP10.71□□□□□ -0.7
C11orf54-201ENST00000331239 ELOA2Q8IYF1 753 aaPredicted RBP10.71□□□□□ -0.7
C11orf54-201ENST00000331239 SLC5A5Q92911 643 aa10.71□□□□□ -0.7
C11orf54-201ENST00000331239 WDR11Q9BZH6 1224 aa10.71□□□□□ -0.7
C11orf54-201ENST00000331239 EFCC1Q9HA90 598 aa10.71□□□□□ -0.7
C11orf54-201ENST00000331239 CLIC4Q9Y696 253 aa10.71□□□□□ -0.7
C11orf54-201ENST00000331239 MRVI1Q9Y6F6 885 aa10.71□□□□□ -0.7
C11orf54-201ENST00000331239 LRRC37A2A6NM11 1700 aa10.7□□□□□ -0.7
C11orf54-201ENST00000331239 ADAMTS3O15072 1205 aa10.7□□□□□ -0.7
C11orf54-201ENST00000331239 ADORA2AP29274 412 aa10.7□□□□□ -0.7
C11orf54-201ENST00000331239 GLIPR1L2Q4G1C9 344 aa10.7□□□□□ -0.7
C11orf54-201ENST00000331239 SASS6Q6UVJ0 657 aa10.7□□□□□ -0.7
C11orf54-201ENST00000331239 ZIC5Q96T25 663 aa10.7□□□□□ -0.7
C11orf54-201ENST00000331239 BEGAINQ9BUH8 593 aa10.7□□□□□ -0.7
C11orf54-201ENST00000331239 TTC12Q9H892 705 aaPredicted RBP10.7□□□□□ -0.7
C11orf54-201ENST00000331239 UQCRHLA0A096LP55 91 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 SOWAHBA6NEL2 793 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 UQCRHP07919 91 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 PDE4DQ08499 809 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 ZNF174Q15697 407 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 CKAP2LQ8IYA6 745 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 ETNPPLQ8TBG4 499 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 LENG9Q96B70 501 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 PGBD1Q96JS3 809 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 ZNF830Q96NB3 372 aaPredicted RBP10.69□□□□□ -0.7
C11orf54-201ENST00000331239 APBA2Q99767 749 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 FBXO2Q9UK22 296 aaPredicted RBP10.69□□□□□ -0.7
C11orf54-201ENST00000331239 GJD2Q9UKL4 321 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 FAM205CA6NFA0 338 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 SPATA31C2B4DYI2 1134 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 NKRFO15226 690 aaKnown RBP eCLIP10.69□□□□□ -0.7
C11orf54-201ENST00000331239 AP5Z1O43299 807 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 MCM7P33993 719 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 DPP9Q86TI2 863 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 PLA2G4DQ86XP0 818 aa10.69□□□□□ -0.7
C11orf54-201ENST00000331239 NEK9Q8TD19 979 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms