RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 CCDC127Q96BQ5 260 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 IMPG2Q9BZV3 1241 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 DMGDHQ9UI17 866 aaKnown RBP15.31■□□□□ 0.04
EPHB3-201ENST00000330394 MAP3K15Q6ZN16 1313 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 LSP1P33241 339 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 ZYXQ15942 572 aaKnown RBP15.31■□□□□ 0.04
EPHB3-201ENST00000330394 RSRC2Q7L4I2 434 aaKnown RBP15.31■□□□□ 0.04
EPHB3-201ENST00000330394 PACS2Q86VP3 889 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 PSTPIP2Q9H939 334 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 ATG3Q9NT62 314 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 ATP2A2P16615 1042 aaKnown RBP15.31■□□□□ 0.04
EPHB3-201ENST00000330394 RPS8P62241 208 aaKnown RBP15.31■□□□□ 0.04
EPHB3-201ENST00000330394 PARP9Q8IXQ6 854 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 TTC16Q8NEE8 873 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 ZNF473Q8WTR7 871 aaKnown RBP15.31■□□□□ 0.04
EPHB3-201ENST00000330394 CNKSR2Q8WXI2 1034 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 SPDL1Q96EA4 605 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 RILPQ96NA2 401 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 ZIM3Q96PE6 472 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 RAB3IPQ96QF0 476 aaPredicted RBP15.31■□□□□ 0.04
EPHB3-201ENST00000330394 LZTS2Q9BRK4 669 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 ZC3H12CQ9C0D7 883 aaKnown RBP15.31■□□□□ 0.04
EPHB3-201ENST00000330394 ZMYND12Q9H0C1 365 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 EHD4Q9H223 541 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 RBM12Q9NTZ6 932 aaKnown RBP15.31■□□□□ 0.04
EPHB3-201ENST00000330394 CAPN11Q9UMQ6 739 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 SUFUQ9UMX1 484 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 ERBB3P21860 1342 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 ZNF211Q13398 564 aaPredicted RBP15.3■□□□□ 0.04
EPHB3-201ENST00000330394 TXNRD1Q16881 649 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 TMTC3Q6ZXV5 915 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 NLRP10Q86W26 655 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 ARL8AQ96BM9 186 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 LBHD1Q9BQE6 289 aaPredicted RBP15.3■□□□□ 0.04
EPHB3-201ENST00000330394 CUEDC2Q9H467 287 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 AMACRQ9UHK6 382 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 FBXL5Q9UKA1 691 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 ALKQ9UM73 1620 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 CPS1P31327 1500 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 A0A0U1RQJ8 604 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 PHF20L1A8MW92 1017 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 ERVV-2B6SEH9 535 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 CYP27B1O15528 508 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 DAPK3O43293 454 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 UFL1O94874 794 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 CYP2D6P10635 497 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 TCP10Q12799 353 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 CTAGE3PQ8IX95 158 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 CFAP61Q8NHU2 1237 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 KIFAP3Q92845 792 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 A2ML1A8K2U0 1454 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 TARSL2A2RTX5 802 aaKnown RBP15.3■□□□□ 0.04
EPHB3-201ENST00000330394 POTEMA6NI47 508 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 EZH2Q15910 746 aaKnown RBP15.3■□□□□ 0.04
EPHB3-201ENST00000330394 PPP2R5EQ16537 467 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 PHLDB2Q86SQ0 1253 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 SGMS1Q86VZ5 419 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 DDX42Q86XP3 938 aaKnown RBP eCLIP15.3■□□□□ 0.04
EPHB3-201ENST00000330394 KIRREL3Q8IZU9 778 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 PIGSQ96S52 555 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 HDAC9Q9UKV0 1011 aa15.3■□□□□ 0.04
EPHB3-201ENST00000330394 CD44P16070 742 aaKnown RBP15.29■□□□□ 0.04
EPHB3-201ENST00000330394 PPP2R2AP63151 447 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 DR1Q01658 176 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 FAM83BQ5T0W9 1011 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 ARL6IP4Q66PJ3 421 aaKnown RBP15.29■□□□□ 0.04
EPHB3-201ENST00000330394 ANKRD40Q6AI12 368 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 ARMC9Q7Z3E5 817 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 IGDCC4Q8TDY8 1250 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 PPP1R1BQ9UD71 204 aaPredicted RBP15.29■□□□□ 0.04
EPHB3-201ENST00000330394 TROVE2P10155 538 aaKnown RBP eCLIP15.29■□□□□ 0.04
EPHB3-201ENST00000330394 HLFQ16534 295 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 SEPT14Q6ZU15 432 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 IL17RAQ96F46 866 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 PSMD1Q99460 953 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 LACRTQ9GZZ8 138 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 INTUQ9ULD6 942 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 STK36Q9NRP7 1315 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 WDR91A4D1P6 747 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 GSG1L2A8MUP6 293 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 ATF7P17544 494 aaPredicted RBP15.29■□□□□ 0.04
EPHB3-201ENST00000330394 MDH1P40925 334 aaKnown RBP15.29■□□□□ 0.04
EPHB3-201ENST00000330394 FOXO4P98177 505 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 PSMD6Q15008 389 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 PTPAQ15257 358 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 CLUL1Q15846 466 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 GLE1Q53GS7 698 aaKnown RBP15.29■□□□□ 0.04
EPHB3-201ENST00000330394 KAZNQ674X7 775 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 WDR66Q8TBY9 1149 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 AK8Q96MA6 479 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 FNBP1Q96RU3 617 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 GOLPH3Q9H4A6 298 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 EMILIN3Q9NT22 766 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 NOP53Q9NZM5 478 aaKnown RBP15.29■□□□□ 0.04
EPHB3-201ENST00000330394 USH1CQ9Y6N9 552 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 PASKQ96RG2 1323 aa15.29■□□□□ 0.04
EPHB3-201ENST00000330394 PDHA1P08559 390 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 RAB3IL1Q8TBN0 382 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 LRRC8CQ8TDW0 803 aa15.28■□□□□ 0.04
EPHB3-201ENST00000330394 PBKQ96KB5 322 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms