RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 H2AFZP0C0S5 128 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 H2AFVQ71UI9 128 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 KRT27Q7Z3Y8 459 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 CAPS2Q9BXY5 557 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 ESYT3A0FGR9 886 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 MAPK4P31152 587 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 RNASELQ05823 741 aaKnown RBP9.62□□□□□ -0.87
SSBP2-201ENST00000320672 BBS9Q3SYG4 887 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 ABT1Q9ULW3 272 aaKnown RBP9.62□□□□□ -0.87
SSBP2-201ENST00000320672 KIAA0232Q92628 1395 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 TCOF1Q13428 1488 aaKnown RBP9.61□□□□□ -0.87
SSBP2-201ENST00000320672 USP17L5A8MUK1 530 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 GBP1P32455 592 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 GLYCTKQ8IVS8 523 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 DNAAF3Q8N9W5 541 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 FAM71BQ8TC56 605 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 IBTKQ9P2D0 1353 aaPredicted RBP9.61□□□□□ -0.87
SSBP2-201ENST00000320672 AGRPO00253 132 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 KCTD19Q17RG1 926 aaPredicted RBP9.61□□□□□ -0.87
SSBP2-201ENST00000320672 ZNF507Q8TCN5 953 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 HEXIM2Q96MH2 286 aaKnown RBP9.61□□□□□ -0.87
SSBP2-201ENST00000320672 NCF2P19878 526 aaPredicted RBP9.61□□□□□ -0.87
SSBP2-201ENST00000320672 BAG6P46379 1132 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 HEXIM1O94992 359 aaKnown RBP9.61□□□□□ -0.87
SSBP2-201ENST00000320672 SZRD1Q7Z422 152 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.61□□□□□ -0.87
SSBP2-201ENST00000320672 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.61□□□□□ -0.87
SSBP2-201ENST00000320672 LPXNO60711 386 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 ACSL3O95573 720 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 ALDH1B1P30837 517 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 TRIM14Q14142 442 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 AOC3Q16853 763 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 RWDD4Q6NW29 188 aaKnown RBP9.61□□□□□ -0.87
SSBP2-201ENST00000320672 CDAN1Q8IWY9 1227 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 CACNA2D3Q8IZS8 1091 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 HESX1Q9UBX0 185 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.61□□□□□ -0.87
SSBP2-201ENST00000320672 EFCAB8A8MWE9 144 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 TOGARAM2Q6ZUX3 1019 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 ZNF277Q9NRM2 450 aaPredicted RBP9.61□□□□□ -0.87
SSBP2-201ENST00000320672 CASQ2O14958 399 aaPredicted RBP9.61□□□□□ -0.87
SSBP2-201ENST00000320672 PLCG1P19174 1290 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 LRRC14Q15048 493 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 RPS6KC1Q96S38 1066 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 PCSK1NQ9UHG2 260 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 NEDD4P46934 1319 aa9.61□□□□□ -0.87
SSBP2-201ENST00000320672 DMP1Q13316 513 aaPredicted RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 DARS2Q6PI48 645 aaKnown RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 TAOK1Q7L7X3 1001 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 GANCQ8TET4 914 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 MRPL11Q9Y3B7 192 aaKnown RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 A0A0G2JLW4 131 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 ATP2B4P23634 1241 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 PPP6R3Q5H9R7 873 aaPredicted RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 TEX2Q8IWB9 1127 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 FAM186BQ8IYM0 893 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 MIS12Q9H081 205 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 SLC38A10Q9HBR0 1119 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 NSFP46459 744 aaKnown RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 GNPTABQ3T906 1256 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 TRMT10CQ7L0Y3 403 aaKnown RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 RNF10Q8N5U6 811 aaKnown RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 GOLPH3LQ9H4A5 285 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 MAP3K15Q6ZN16 1313 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 YEATS2Q9ULM3 1422 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 PALM3A6NDB9 673 aaPredicted RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 GH2P01242 217 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 CMA1P23946 247 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 SPATA1Q5VX52 437 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 TBC1D10CQ8IV04 446 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 PIGBQ92521 554 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 SARS2Q9NP81 518 aaKnown RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 MOCS2O96007 188 aaPredicted RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 ATP5DP30049 168 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 FAM83BQ5T0W9 1011 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 ANGPTL8Q6UXH0 198 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 ELMO3Q96BJ8 720 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 ZNF341Q9BYN7 854 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 HDAC6Q9UBN7 1215 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 H0Y3Z8 333 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 COG7P83436 770 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 FAM117BQ6P1L5 589 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 ZNF274Q96GC6 653 aaPredicted RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 AFF4Q9UHB7 1163 aaKnown RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 USP17L10C9JJH3 530 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 TLR3O15455 904 aaKnown RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 KIF23Q02241 960 aaPredicted RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 RASGRF1Q13972 1273 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 HADHQ16836 314 aaKnown RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 PIP4K2CQ8TBX8 421 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 LARP4BQ92615 738 aaKnown RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 ADPGKQ9BRR6 497 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 NUCKS1Q9H1E3 243 aaKnown RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 ZCCHC17Q9NP64 241 aaKnown RBP9.6□□□□□ -0.87
SSBP2-201ENST00000320672 SMARCAL1Q9NZC9 954 aa9.6□□□□□ -0.87
SSBP2-201ENST00000320672 ABCB11O95342 1321 aa9.59□□□□□ -0.87
SSBP2-201ENST00000320672 PTPN12Q05209 780 aaKnown RBP9.59□□□□□ -0.87
SSBP2-201ENST00000320672 LMNTD2Q8IXW0 634 aa9.59□□□□□ -0.87
SSBP2-201ENST00000320672 RETREG2Q8NC44 543 aa9.59□□□□□ -0.87
SSBP2-201ENST00000320672 BHMT2Q9H2M3 363 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms