RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 YTHDF3Q7Z739 585 aaKnown RBP10.64□□□□□ -0.71
PTPRA-202ENST00000318266 CPLX4Q7Z7G2 160 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 STAG2Q8N3U4 1231 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 KIAA0895Q8NCT3 520 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 SIK3Q9Y2K2 1263 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 LEMD3Q9Y2U8 911 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 A0A0G2JS52 829 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 CLGNO14967 610 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 KIF1CO43896 1103 aaKnown RBP10.63□□□□□ -0.71
PTPRA-202ENST00000318266 PDE8AO60658 829 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 CYP2D6P10635 497 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 FLT3P36888 993 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 TECP42680 631 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 GYG1P46976 350 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 ERVK-9P63128 1117 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 PFKFB3Q16875 520 aaPredicted RBP10.63□□□□□ -0.71
PTPRA-202ENST00000318266 GLIS3Q8NEA6 775 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 MDM1Q8TC05 714 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 TRIM31Q9BZY9 425 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 LRRC4CQ9HCJ2 640 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 A1CFQ9NQ94 594 aaKnown RBP10.63□□□□□ -0.71
PTPRA-202ENST00000318266 CNOT8Q9UFF9 292 aaKnown RBP10.63□□□□□ -0.71
PTPRA-202ENST00000318266 ATXN2Q99700 1313 aaKnown RBP10.63□□□□□ -0.71
PTPRA-202ENST00000318266 TSPY2A6NKD2 308 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 EZRP15311 586 aaKnown RBP10.63□□□□□ -0.71
PTPRA-202ENST00000318266 GBP2P32456 591 aaPredicted RBP10.63□□□□□ -0.71
PTPRA-202ENST00000318266 KIAA0753Q2KHM9 967 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 TBC1D5Q92609 795 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 SEC16BQ96JE7 1060 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 TCP11L1Q9NUJ3 509 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 ADAMTS1Q9UHI8 967 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 A0A1W2PQJ5 194 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 SMIM23A6NLE4 172 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 CDK17Q00537 523 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 GLE1Q53GS7 698 aaKnown RBP10.63□□□□□ -0.71
PTPRA-202ENST00000318266 ANKRD20A8PQ5CZ79 823 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 C6orf89Q6UWU4 347 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 CACNA2D3Q8IZS8 1091 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 DDX47Q9H0S4 455 aaKnown RBP10.63□□□□□ -0.71
PTPRA-202ENST00000318266 NEUROG2Q9H2A3 272 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 TMBIM4Q9HC24 238 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 TMOD3Q9NYL9 352 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 JAG2Q9Y219 1238 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 KAT6BQ8WYB5 2073 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 PCDH11XQ9BZA7 1347 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 PCDH11YQ9BZA8 1340 aa10.63□□□□□ -0.71
PTPRA-202ENST00000318266 MYH2Q9UKX2 1941 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 CEP104O60308 925 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 CALM1P0DP23 149 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 CALM2P0DP24 149 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 CALM3P0DP25 149 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 CDC25CP30307 473 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 SCTRP47872 440 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 POLR2FP61218 127 aaKnown RBP10.62□□□□□ -0.71
PTPRA-202ENST00000318266 MAGOHP61326 146 aaKnown RBP10.62□□□□□ -0.71
PTPRA-202ENST00000318266 ZNF844Q08AG5 666 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 RAPGEF1Q13905 1077 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 UAP1Q16222 522 aaPredicted RBP10.62□□□□□ -0.71
PTPRA-202ENST00000318266 ACCSLQ4AC99 568 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 HIBCHQ6NVY1 386 aaPredicted RBP10.62□□□□□ -0.71
PTPRA-202ENST00000318266 ZSCAN29Q8IWY8 852 aaPredicted RBP10.62□□□□□ -0.71
PTPRA-202ENST00000318266 RUBCNQ92622 972 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 MAGOHBQ96A72 148 aaKnown RBP10.62□□□□□ -0.71
PTPRA-202ENST00000318266 SGSM3Q96HU1 749 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 UIMC1Q96RL1 719 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 PRDM11Q9NQV5 511 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 CCNT1O60563 726 aaKnown RBP10.62□□□□□ -0.71
PTPRA-202ENST00000318266 TNFRSF8P28908 595 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 PPP1R7Q15435 360 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 CDC37Q16543 378 aaPredicted RBP10.62□□□□□ -0.71
PTPRA-202ENST00000318266 PNMA8AQ86V59 439 aaPredicted RBP10.62□□□□□ -0.71
PTPRA-202ENST00000318266 WHAMMQ8TF30 809 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 TCP11Q8WWU5 503 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 BAP1Q92560 729 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 RAPGEF5Q92565 580 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 FBXL5Q9UKA1 691 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 MROH5Q6ZUA9 1318 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 ERVV-2B6SEH9 535 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 GOLGA8HP0CJ92 632 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 R3HDM1Q15032 1099 aaKnown RBP10.62□□□□□ -0.71
PTPRA-202ENST00000318266 KRT71Q3SY84 523 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 MSL1Q68DK7 614 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 ARFGAP2Q8N6H7 521 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 TAF4BQ92750 862 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 HVCN1Q96D96 273 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 DPH5Q9H2P9 285 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 TAF1DQ9H5J8 278 aaPredicted RBP10.62□□□□□ -0.71
PTPRA-202ENST00000318266 PCDHA4Q9UN74 947 aa10.62□□□□□ -0.71
PTPRA-202ENST00000318266 TMCO5BA8MYB1 307 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 TRAPPC3O43617 180 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 C21orf2O43822 256 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 DDAH1O94760 285 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 CLTAP09496 248 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 CALML3P27482 149 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 TNNC1P63316 161 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 FIGNQ5HY92 759 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 PDXDC1Q6P996 788 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 TBC1D7Q9P0N9 293 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 GGT7Q9UJ14 662 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 ZBTB1Q9Y2K1 713 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms