RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 CD302Q8IX05 232 aa21.1■□□□□ 0.97
RTN4-201ENST00000317610 ZNF713Q8N859 430 aaPredicted RBP21.1■□□□□ 0.97
RTN4-201ENST00000317610 BIN2Q9UBW5 565 aaPredicted RBP21.1■□□□□ 0.97
RTN4-201ENST00000317610 SPATA31A1Q5TZJ5 1347 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 BUB1O43683 1085 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 EDIL3O43854 480 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 TLR2O60603 784 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 NOL4O94818 638 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 GLI1P08151 1106 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 NOVP48745 357 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 ATP2B2Q01814 1243 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 USP17L2Q6R6M4 530 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 BICDL1Q6ZP65 573 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 C16orf86Q6ZW13 317 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 LINC00116Q8NCU8 138 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 MS4A14Q96JA4 679 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 CDK5RAP3Q96JB5 506 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 PAK2Q13177 524 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 NAB2Q15742 525 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 C1orf131Q8NDD1 294 aaKnown RBP21.09■□□□□ 0.97
RTN4-201ENST00000317610 DDX12PQ92771 950 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 PIGSQ96S52 555 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 EYA3Q99504 573 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 RAB34Q9BZG1 259 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 TMEM260Q9NX78 707 aa21.09■□□□□ 0.97
RTN4-201ENST00000317610 SLC37A4O43826 429 aa21.08■□□□□ 0.97
RTN4-201ENST00000317610 ZEB2O60315 1214 aa21.08■□□□□ 0.97
RTN4-201ENST00000317610 SFMBT2Q5VUG0 894 aa21.08■□□□□ 0.97
RTN4-201ENST00000317610 SUGP1Q8IWZ8 645 aaKnown RBP21.08■□□□□ 0.97
RTN4-201ENST00000317610 RIOX1Q9H6W3 641 aa21.08■□□□□ 0.97
RTN4-201ENST00000317610 PCDHGC5Q9Y5F6 944 aa21.08■□□□□ 0.97
RTN4-201ENST00000317610 COL4A3BPQ9Y5P4 624 aa21.08■□□□□ 0.97
RTN4-201ENST00000317610 CDK8P49336 464 aa21.07■□□□□ 0.96
RTN4-201ENST00000317610 CARSP49589 748 aaKnown RBP21.07■□□□□ 0.96
RTN4-201ENST00000317610 FKBP3Q00688 224 aaKnown RBP21.07■□□□□ 0.96
RTN4-201ENST00000317610 SEPT2Q15019 361 aa21.07■□□□□ 0.96
RTN4-201ENST00000317610 DIXDC1Q155Q3 683 aa21.07■□□□□ 0.96
RTN4-201ENST00000317610 SKIDA1Q1XH10 827 aa21.07■□□□□ 0.96
RTN4-201ENST00000317610 KDM7AQ6ZMT4 941 aa21.07■□□□□ 0.96
RTN4-201ENST00000317610 MYOCDQ8IZQ8 938 aa21.07■□□□□ 0.96
RTN4-201ENST00000317610 MICALL1Q8N3F8 863 aa21.07■□□□□ 0.96
RTN4-201ENST00000317610 LUC7LQ9NQ29 371 aaKnown RBP21.07■□□□□ 0.96
RTN4-201ENST00000317610 NRAPQ86VF7 1730 aa21.07■□□□□ 0.96
RTN4-201ENST00000317610 HEXIM1O94992 359 aaKnown RBP21.07■□□□□ 0.96
RTN4-201ENST00000317610 TDRD12Q587J7 1177 aaKnown RBP21.07■□□□□ 0.96
RTN4-201ENST00000317610 FAM83BQ5T0W9 1011 aa21.07■□□□□ 0.96
RTN4-201ENST00000317610 GLIS3Q8NEA6 775 aa21.07■□□□□ 0.96
RTN4-201ENST00000317610 INPP4AQ96PE3 977 aaPredicted RBP21.07■□□□□ 0.96
RTN4-201ENST00000317610 ATP6V0A2Q9Y487 856 aa21.07■□□□□ 0.96
RTN4-201ENST00000317610 PALMO75781 387 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 ERLIN2O94905 339 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 TM4SF1P30408 202 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 GRIK5Q16478 980 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 MEI1Q5TIA1 1274 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 KRT79Q5XKE5 535 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 KCNK18Q7Z418 384 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 GPIHBP1Q8IV16 184 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 MAPKAPK5Q8IW41 473 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 SNX29Q8TEQ0 813 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 PIK3R5Q8WYR1 880 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 DNAJC19Q96DA6 116 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 CEP63Q96MT8 703 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 NUDT12Q9BQG2 462 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 RTFDC1Q9BY42 306 aaPredicted RBP21.06■□□□□ 0.96
RTN4-201ENST00000317610 SAP30BPQ9UHR5 308 aaKnown RBP21.06■□□□□ 0.96
RTN4-201ENST00000317610 NHSQ6T4R5 1651 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 ZNF233A6NK53 670 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 LDHCP07864 332 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 FAM153BP0C7A2 387 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 MARSP56192 900 aaKnown RBP21.06■□□□□ 0.96
RTN4-201ENST00000317610 LRRC41Q15345 812 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 FAM153CQ494X1 144 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 CFAP58Q5T655 872 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 TMC4Q7Z404 712 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 CERS3Q8IU89 383 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 CCDC43Q96MW1 224 aaKnown RBP21.06■□□□□ 0.96
RTN4-201ENST00000317610 TANGO6Q9C0B7 1094 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 EPB41L5Q9HCM4 733 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 FAM153AQ9UHL3 310 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 NFU1Q9UMS0 254 aa21.06■□□□□ 0.96
RTN4-201ENST00000317610 POTEMA6NI47 508 aa21.05■□□□□ 0.96
RTN4-201ENST00000317610 TDP2O95551 362 aa21.05■□□□□ 0.96
RTN4-201ENST00000317610 COASYQ13057 564 aa21.05■□□□□ 0.96
RTN4-201ENST00000317610 PDCLQ13371 301 aa21.05■□□□□ 0.96
RTN4-201ENST00000317610 SLC18A3Q16572 532 aa21.05■□□□□ 0.96
RTN4-201ENST00000317610 MMS22LQ6ZRQ5 1243 aa21.05■□□□□ 0.96
RTN4-201ENST00000317610 NLRC4Q9NPP4 1024 aa21.05■□□□□ 0.96
RTN4-201ENST00000317610 TNRC6CQ9HCJ0 1690 aaKnown RBP21.05■□□□□ 0.96
RTN4-201ENST00000317610 CNTNAP4Q9C0A0 1308 aa21.05■□□□□ 0.96
RTN4-201ENST00000317610 MYBP10242 640 aa21.05■□□□□ 0.96
RTN4-201ENST00000317610 NAP1L1P55209 391 aaKnown RBP21.05■□□□□ 0.96
RTN4-201ENST00000317610 GUCY2DQ02846 1103 aa21.05■□□□□ 0.96
RTN4-201ENST00000317610 WHAMMQ8TF30 809 aa21.05■□□□□ 0.96
RTN4-201ENST00000317610 PAGR1Q9BTK6 254 aa21.05■□□□□ 0.96
RTN4-201ENST00000317610 VAT1LQ9HCJ6 419 aa21.05■□□□□ 0.96
RTN4-201ENST00000317610 CES2O00748 559 aa21.04■□□□□ 0.96
RTN4-201ENST00000317610 GNA14O95837 355 aa21.04■□□□□ 0.96
RTN4-201ENST00000317610 KRT14P02533 472 aa21.04■□□□□ 0.96
RTN4-201ENST00000317610 KLRC1P26715 233 aa21.04■□□□□ 0.96
RTN4-201ENST00000317610 ADCY7P51828 1080 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms