RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 KIAA1683Q9H0B3 1180 aa20.49■□□□□ 0.87
CCDC43-201ENST00000315286 ABCB11O95342 1321 aa20.49■□□□□ 0.87
CCDC43-201ENST00000315286 HAUS3Q68CZ6 603 aa20.49■□□□□ 0.87
CCDC43-201ENST00000315286 CENPPQ6IPU0 288 aa20.49■□□□□ 0.87
CCDC43-201ENST00000315286 ZNF536O15090 1300 aa20.48■□□□□ 0.87
CCDC43-201ENST00000315286 POTEFA5A3E0 1075 aa20.48■□□□□ 0.87
CCDC43-201ENST00000315286 RIOK3O14730 519 aaKnown RBP20.48■□□□□ 0.87
CCDC43-201ENST00000315286 WDR46O15213 610 aaKnown RBP20.48■□□□□ 0.87
CCDC43-201ENST00000315286 GYPCP04921 128 aa20.48■□□□□ 0.87
CCDC43-201ENST00000315286 POTEIP0CG38 1075 aa20.48■□□□□ 0.87
CCDC43-201ENST00000315286 UBXN2AP68543 259 aa20.48■□□□□ 0.87
CCDC43-201ENST00000315286 UBXN1Q04323 297 aa20.48■□□□□ 0.87
CCDC43-201ENST00000315286 POTEGQ6S5H5 508 aa20.48■□□□□ 0.87
CCDC43-201ENST00000315286 POTEEQ6S8J3 1075 aa20.48■□□□□ 0.87
CCDC43-201ENST00000315286 PRPF38AQ8NAV1 312 aaKnown RBP20.48■□□□□ 0.87
CCDC43-201ENST00000315286 ZNF592Q92610 1267 aa20.48■□□□□ 0.87
CCDC43-201ENST00000315286 LPAR1Q92633 364 aa20.48■□□□□ 0.87
CCDC43-201ENST00000315286 PANX2Q96RD6 677 aa20.48■□□□□ 0.87
CCDC43-201ENST00000315286 MAGEC2Q9UBF1 373 aaPredicted RBP20.48■□□□□ 0.87
CCDC43-201ENST00000315286 VAV3Q9UKW4 847 aa20.48■□□□□ 0.87
CCDC43-201ENST00000315286 SPATA31C1P0DKV0 1188 aa20.47■□□□□ 0.87
CCDC43-201ENST00000315286 CASP14P31944 242 aa20.47■□□□□ 0.87
CCDC43-201ENST00000315286 PSMD2Q13200 908 aa20.47■□□□□ 0.87
CCDC43-201ENST00000315286 GUF1Q8N442 669 aaKnown RBP20.47■□□□□ 0.87
CCDC43-201ENST00000315286 GLIS3Q8NEA6 775 aa20.47■□□□□ 0.87
CCDC43-201ENST00000315286 ERMNQ8TAM6 284 aa20.47■□□□□ 0.87
CCDC43-201ENST00000315286 SLF1Q9BQI6 1058 aa20.47■□□□□ 0.87
CCDC43-201ENST00000315286 WDR18Q9BV38 432 aa20.47■□□□□ 0.87
CCDC43-201ENST00000315286 BMP2KQ9NSY1 1161 aaPredicted RBP20.47■□□□□ 0.87
CCDC43-201ENST00000315286 GINM1Q9NU53 330 aa20.47■□□□□ 0.87
CCDC43-201ENST00000315286 ICAM1P05362 532 aa20.47■□□□□ 0.87
CCDC43-201ENST00000315286 RPA1P27694 616 aa20.47■□□□□ 0.87
CCDC43-201ENST00000315286 FXR1P51114 621 aaKnown RBP eCLIP20.47■□□□□ 0.87
CCDC43-201ENST00000315286 COASYQ13057 564 aa20.47■□□□□ 0.87
CCDC43-201ENST00000315286 PANK4Q9NVE7 773 aa20.47■□□□□ 0.87
CCDC43-201ENST00000315286 CCPG1Q9ULG6 757 aa20.47■□□□□ 0.87
CCDC43-201ENST00000315286 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.47■□□□□ 0.871e-7■■□□□ 12.3
CCDC43-201ENST00000315286 LGALS16A8MUM7 142 aa20.46■□□□□ 0.87
CCDC43-201ENST00000315286 MFAP3LO75121 409 aa20.46■□□□□ 0.87
CCDC43-201ENST00000315286 SLC12A3P55017 1021 aa20.46■□□□□ 0.87
CCDC43-201ENST00000315286 PSMC6P62333 389 aa20.46■□□□□ 0.87
CCDC43-201ENST00000315286 LRRC41Q15345 812 aa20.46■□□□□ 0.87
CCDC43-201ENST00000315286 PRAMEF18Q5VWM3 479 aa20.46■□□□□ 0.87
CCDC43-201ENST00000315286 GPBP1Q86WP2 473 aa20.46■□□□□ 0.87
CCDC43-201ENST00000315286 PAXBP1Q9Y5B6 917 aa20.46■□□□□ 0.87
CCDC43-201ENST00000315286 NPHP3-ACAD11A0A0J9YXS1 232 aa20.46■□□□□ 0.87
CCDC43-201ENST00000315286 MEIS1O00470 390 aa20.46■□□□□ 0.87
CCDC43-201ENST00000315286 CYP11B2P19099 503 aa20.46■□□□□ 0.87
CCDC43-201ENST00000315286 ANGEL2Q5VTE6 544 aaKnown RBP20.46■□□□□ 0.87
CCDC43-201ENST00000315286 SLC30A10Q6XR72 485 aa20.46■□□□□ 0.87
CCDC43-201ENST00000315286 MB21D1Q8N884 522 aa20.46■□□□□ 0.87
CCDC43-201ENST00000315286 ZNF507Q8TCN5 953 aa20.46■□□□□ 0.87
CCDC43-201ENST00000315286 ZFP91Q96JP5 570 aaPredicted RBP20.46■□□□□ 0.87
CCDC43-201ENST00000315286 TUBGCP2Q9BSJ2 902 aa20.46■□□□□ 0.87
CCDC43-201ENST00000315286 RNF225M0QZC1 329 aaPredicted RBP20.45■□□□□ 0.86
CCDC43-201ENST00000315286 EML1O00423 815 aa20.45■□□□□ 0.86
CCDC43-201ENST00000315286 CCP110O43303 1012 aa20.45■□□□□ 0.86
CCDC43-201ENST00000315286 MTMR2Q13614 643 aa20.45■□□□□ 0.86
CCDC43-201ENST00000315286 ARSHQ5FYA8 562 aa20.45■□□□□ 0.86
CCDC43-201ENST00000315286 HOOK2Q96ED9 719 aa20.45■□□□□ 0.86
CCDC43-201ENST00000315286 CNOT6LQ96LI5 555 aaKnown RBP20.45■□□□□ 0.86
CCDC43-201ENST00000315286 EMILIN3Q9NT22 766 aa20.45■□□□□ 0.86
CCDC43-201ENST00000315286 PES1O00541 588 aaKnown RBP20.44■□□□□ 0.86
CCDC43-201ENST00000315286 GTF2F1P35269 517 aaKnown RBP eCLIP20.44■□□□□ 0.86
CCDC43-201ENST00000315286 CACNB1Q02641 598 aaPredicted RBP20.44■□□□□ 0.86
CCDC43-201ENST00000315286 FAM114A1Q8IWE2 563 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 REXO1L1PQ8IX06 675 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 CPXCR1Q8N123 301 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 TRPM4Q8TD43 1214 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 TANGO6Q9C0B7 1094 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 EHMT1Q9H9B1 1298 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 PRKCSHP14314 528 aaPredicted RBP20.44■□□□□ 0.86
CCDC43-201ENST00000315286 HOXA7P31268 230 aaPredicted RBP20.44■□□□□ 0.86
CCDC43-201ENST00000315286 HSD17B4P51659 736 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 CYP4A11Q02928 519 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 RAD51AP2Q09MP3 1159 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 SPP2Q13103 211 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 DCAF15Q66K64 600 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 TOGARAM2Q6ZUX3 1019 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 OTOP1Q7RTM1 612 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 CNGA4Q8IV77 575 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 CLEC4DQ8WXI8 215 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 FZD1Q9UP38 647 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 DNM3Q9UQ16 869 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 PPP2R2CQ9Y2T4 447 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 STK24Q9Y6E0 443 aa20.44■□□□□ 0.86
CCDC43-201ENST00000315286 B4DLN1 442 aa20.43■□□□□ 0.86
CCDC43-201ENST00000315286 KIF2AO00139 706 aaPredicted RBP20.43■□□□□ 0.86
CCDC43-201ENST00000315286 NFIBO00712 420 aa20.43■□□□□ 0.86
CCDC43-201ENST00000315286 DYNC1I1O14576 645 aa20.43■□□□□ 0.86
CCDC43-201ENST00000315286 VCAM1P19320 739 aa20.43■□□□□ 0.86
CCDC43-201ENST00000315286 PABPC4Q13310 644 aaKnown RBP eCLIP20.43■□□□□ 0.862e-8■■■■□ 19.9
CCDC43-201ENST00000315286 MTF1Q14872 753 aa20.43■□□□□ 0.86
CCDC43-201ENST00000315286 CEP55Q53EZ4 464 aa20.43■□□□□ 0.86
CCDC43-201ENST00000315286 FAM26FQ5R3K3 315 aa20.43■□□□□ 0.86
CCDC43-201ENST00000315286 CCDC65Q8IXS2 484 aa20.43■□□□□ 0.86
CCDC43-201ENST00000315286 ZKSCAN4Q969J2 545 aaPredicted RBP20.43■□□□□ 0.86
CCDC43-201ENST00000315286 EIF2AK1Q9BQI3 630 aaKnown RBP20.43■□□□□ 0.86
CCDC43-201ENST00000315286 SLC38A10Q9HBR0 1119 aa20.43■□□□□ 0.86
CCDC43-201ENST00000315286 TBC1D7Q9P0N9 293 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms