RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 CD302Q8IX05 232 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 CACNA2D3Q8IZS8 1091 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 C7orf25Q9BPX7 421 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 LSM14BQ9BX40 385 aaKnown RBP16.15■□□□□ 0.18
COL6A2-202ENST00000310645 DDX47Q9H0S4 455 aaKnown RBP16.15■□□□□ 0.18
COL6A2-202ENST00000310645 A1CFQ9NQ94 594 aaKnown RBP16.15■□□□□ 0.18
COL6A2-202ENST00000310645 LEMD3Q9Y2U8 911 aa16.15■□□□□ 0.18
COL6A2-202ENST00000310645 A0A087X0T9 212 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 MYMKA6NI61 221 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 DCDC2CA8MYV0 355 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 TRAF5O00463 557 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 PPP1R12BO60237 982 aaPredicted RBP16.14■□□□□ 0.17
COL6A2-202ENST00000310645 FAM228BP0C875 321 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 C6orf89Q6UWU4 347 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 MREGQ8N565 214 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 UIMC1Q96RL1 719 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 BRIP1Q9BX63 1249 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 RNF14Q9UBS8 474 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 CNOT8Q9UFF9 292 aaKnown RBP16.14■□□□□ 0.17
COL6A2-202ENST00000310645 FBXL5Q9UKA1 691 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 TPX2Q9ULW0 747 aaKnown RBP16.14■□□□□ 0.17
COL6A2-202ENST00000310645 FLT1P17948 1338 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 TLR2O60603 784 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 FLT3P36888 993 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 NKX1-1Q15270 411 aaPredicted RBP16.14■□□□□ 0.17
COL6A2-202ENST00000310645 ASTE1Q2TB18 679 aaPredicted RBP16.14■□□□□ 0.17
COL6A2-202ENST00000310645 FAM83BQ5T0W9 1011 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 FAM133AQ8N9E0 248 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 MDM1Q8TC05 714 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 STX8Q9UNK0 236 aa16.14■□□□□ 0.17
COL6A2-202ENST00000310645 HSPA9P38646 679 aaKnown RBP16.13■□□□□ 0.17
COL6A2-202ENST00000310645 MAGOHP61326 146 aaKnown RBP16.13■□□□□ 0.17
COL6A2-202ENST00000310645 RPS6KA1Q15418 735 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 KRT71Q3SY84 523 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 RCSD1Q6JBY9 416 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 USP38Q8NB14 1042 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 MAGOHBQ96A72 148 aaKnown RBP16.13■□□□□ 0.17
COL6A2-202ENST00000310645 LUC7LQ9NQ29 371 aaKnown RBP16.13■□□□□ 0.17
COL6A2-202ENST00000310645 MCM9Q9NXL9 1143 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 BAIAP2L1Q9UHR4 511 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 EZRP15311 586 aaKnown RBP16.13■□□□□ 0.17
COL6A2-202ENST00000310645 CLNS1AP54105 237 aaKnown RBP16.13■□□□□ 0.17
COL6A2-202ENST00000310645 NAPAP54920 295 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 ZNF844Q08AG5 666 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 KCNMA1Q12791 1236 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 UAP1Q16222 522 aaPredicted RBP16.13■□□□□ 0.17
COL6A2-202ENST00000310645 RAPGEF5Q92565 580 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 INPP4AQ96PE3 977 aaPredicted RBP16.13■□□□□ 0.17
COL6A2-202ENST00000310645 NEUROG2Q9H2A3 272 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 DCP1AQ9NPI6 582 aaPredicted RBP16.13■□□□□ 0.17
COL6A2-202ENST00000310645 TRPM3Q9HCF6 1732 aaPredicted RBP16.13■□□□□ 0.17
COL6A2-202ENST00000310645 USP17L3A6NCW0 530 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 USP17L4A6NCW7 530 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 KLHL30Q0D2K2 578 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 CCDC152Q4G0S7 254 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 ANKRD20A8PQ5CZ79 823 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 USP17L1Q7RTZ2 530 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 ZNF384Q8TF68 577 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 DYNLL2Q96FJ2 89 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 SLC4A9Q96Q91 983 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 DPH5Q9H2P9 285 aa16.13■□□□□ 0.17
COL6A2-202ENST00000310645 USP17L8P0C7I0 530 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 CYP19A1P11511 503 aaPredicted RBP16.12■□□□□ 0.17
COL6A2-202ENST00000310645 NAB2Q15742 525 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 MEI1Q5TIA1 1274 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 FAM228AQ86W67 206 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 IQCDQ96DY2 449 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 PAGR1Q9BTK6 254 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 CUEDC2Q9H467 287 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 ACTR5Q9H9F9 607 aaPredicted RBP16.12■□□□□ 0.17
COL6A2-202ENST00000310645 PLCB1Q9NQ66 1216 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 TRAPPC3O43617 180 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 FGFR1OPO95684 399 aaKnown RBP16.12■□□□□ 0.17
COL6A2-202ENST00000310645 SCTRP47872 440 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 IFFO1Q0D2I5 559 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 CHADLQ6NUI6 762 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 RPAINQ86UA6 219 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 NELFCDQ8IXH7 590 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 SGSM3Q96HU1 749 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.12■□□□□ 0.17
COL6A2-202ENST00000310645 SSU72P8A0A1W2PR75 194 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 GRID2IPA4D2P6 1211 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 SMIM23A6NLE4 172 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 DAPK3O43293 454 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 KIF1CO43896 1103 aaKnown RBP16.12■□□□□ 0.17
COL6A2-202ENST00000310645 SERPING1P05155 500 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 GBP2P32456 591 aaPredicted RBP16.12■□□□□ 0.17
COL6A2-202ENST00000310645 PPP2R2AP63151 447 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 NAA25Q14CX7 972 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 TMED8Q6PL24 325 aaPredicted RBP16.12■□□□□ 0.17
COL6A2-202ENST00000310645 LRRC45Q96CN5 670 aa16.12■□□□□ 0.17
COL6A2-202ENST00000310645 SART1O43290 800 aaKnown RBP16.11■□□□□ 0.17
COL6A2-202ENST00000310645 CYTH3O43739 400 aa16.11■□□□□ 0.17
COL6A2-202ENST00000310645 PPP1R7Q15435 360 aa16.11■□□□□ 0.17
COL6A2-202ENST00000310645 GKAP1Q5VSY0 366 aaPredicted RBP16.11■□□□□ 0.17
COL6A2-202ENST00000310645 HIBCHQ6NVY1 386 aaPredicted RBP16.11■□□□□ 0.17
COL6A2-202ENST00000310645 MIEF2Q96C03 454 aa16.11■□□□□ 0.17
COL6A2-202ENST00000310645 HVCN1Q96D96 273 aa16.11■□□□□ 0.17
COL6A2-202ENST00000310645 MMTAG2Q9BU76 263 aaKnown RBP16.11■□□□□ 0.17
COL6A2-202ENST00000310645 ISCUQ9H1K1 167 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms