RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 TACC3Q9Y6A5 838 aa16.62■□□□□ 0.25
LEMD3-201ENST00000308330 TSPAN9O75954 239 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 ALAS1P13196 640 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 EPHB4P54760 987 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 USP4Q13107 963 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 RILPL1Q5EBL4 403 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 USP37Q86T82 979 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 ZNF654Q8IZM8 581 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 ATP2A3Q93084 1043 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 COQ7Q99807 217 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 CYP26C1Q6V0L0 522 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 LZTS2Q9BRK4 669 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 CARD9Q9H257 536 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 SUCLA2Q9P2R7 463 aaPredicted RBP16.61■□□□□ 0.25
LEMD3-201ENST00000308330 SPATA31A5Q5VU36 1347 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 SPATA31A7Q8IWB4 1347 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 TMEM110-MUSTN1A8MSY1 372 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 NBPF26B4DH59 902 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 PSMA7O14818 248 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 PYGLP06737 847 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 NBPF15Q8N660 670 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 NAP1L4Q99733 375 aaKnown RBP16.61■□□□□ 0.25
LEMD3-201ENST00000308330 ZNF446Q9NWS9 450 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 ANP32DO95626 131 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 CETN2P41208 172 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 DYNLL1P63167 89 aaKnown RBP16.61■□□□□ 0.25
LEMD3-201ENST00000308330 PABPC4Q13310 644 aaKnown RBP eCLIP16.61■□□□□ 0.25
LEMD3-201ENST00000308330 EPHA10Q5JZY3 1008 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 DEFB132Q7Z7B7 95 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 NACA2Q9H009 215 aa16.61■□□□□ 0.25
LEMD3-201ENST00000308330 MTRF1LQ9UGC7 380 aaKnown RBP16.61■□□□□ 0.25
LEMD3-201ENST00000308330 ADCY7P51828 1080 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 CCDC42Q96M95 316 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 WDR46O15213 610 aaKnown RBP16.6■□□□□ 0.25
LEMD3-201ENST00000308330 MAN1A2O60476 641 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 KRT13P13646 458 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 TXKP42681 527 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 PTH1RQ03431 593 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 PPRC1Q5VV67 1664 aaKnown RBP16.6■□□□□ 0.25
LEMD3-201ENST00000308330 ARHGAP10A1A4S6 786 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 TMEM232C9JQI7 657 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 H0Y3Z8 333 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 POTEEQ6S8J3 1075 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 BARGINQ6ZT62 677 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 KCTD17Q8N5Z5 321 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 CCDC17Q96LX7 622 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 TTC1Q99614 292 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.6■□□□□ 0.25
LEMD3-201ENST00000308330 TXLNGQ9NUQ3 528 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 PALD1Q9ULE6 856 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 MKL2Q9ULH7 1088 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 CARMIL3Q8ND23 1372 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 TNKSO95271 1327 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 E9PCH4 1651 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 ZMYND10O75800 440 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 USP17L8P0C7I0 530 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 SERPINB13Q9UIV8 391 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 CARD8Q9Y2G2 431 aa16.6■□□□□ 0.25
LEMD3-201ENST00000308330 STX10O60499 249 aa16.59■□□□□ 0.25
LEMD3-201ENST00000308330 CTNND1O60716 968 aaKnown RBP16.59■□□□□ 0.25
LEMD3-201ENST00000308330 CFAP61Q8NHU2 1237 aa16.59■□□□□ 0.25
LEMD3-201ENST00000308330 DDX23Q9BUQ8 820 aaKnown RBP16.59■□□□□ 0.25
LEMD3-201ENST00000308330 KCNA2P16389 499 aa16.59■□□□□ 0.25
LEMD3-201ENST00000308330 ARID5BQ14865 1188 aa16.59■□□□□ 0.25
LEMD3-201ENST00000308330 NONOQ15233 471 aaKnown RBP eCLIP16.59■□□□□ 0.25
LEMD3-201ENST00000308330 SLFN13Q68D06 897 aa16.59■□□□□ 0.25
LEMD3-201ENST00000308330 SPICE1Q8N0Z3 855 aa16.59■□□□□ 0.25
LEMD3-201ENST00000308330 MINPP1Q9UNW1 487 aa16.59■□□□□ 0.25
LEMD3-201ENST00000308330 R3HDM2Q9Y2K5 976 aaKnown RBP16.59■□□□□ 0.25
LEMD3-201ENST00000308330 INO80Q9ULG1 1556 aaPredicted RBP16.59■□□□□ 0.25
LEMD3-201ENST00000308330 DDX39AO00148 427 aaKnown RBP16.59■□□□□ 0.25
LEMD3-201ENST00000308330 KRT14P02533 472 aa16.59■□□□□ 0.25
LEMD3-201ENST00000308330 GSPT1P15170 499 aaKnown RBP16.59■□□□□ 0.25
LEMD3-201ENST00000308330 TBL3Q12788 808 aaKnown RBP16.59■□□□□ 0.25
LEMD3-201ENST00000308330 BHMTQ93088 406 aa16.59■□□□□ 0.25
LEMD3-201ENST00000308330 BRIP1Q9BX63 1249 aa16.59■□□□□ 0.25
LEMD3-201ENST00000308330 RABL2AQ9UBK7 228 aaPredicted RBP16.59■□□□□ 0.25
LEMD3-201ENST00000308330 ADCY3O60266 1144 aa16.58■□□□□ 0.25
LEMD3-201ENST00000308330 SERPINI2O75830 405 aa16.58■□□□□ 0.25
LEMD3-201ENST00000308330 GOLGA8HP0CJ92 632 aa16.58■□□□□ 0.25
LEMD3-201ENST00000308330 PDE1BQ01064 536 aa16.58■□□□□ 0.25
LEMD3-201ENST00000308330 FOXR1Q6PIV2 292 aa16.58■□□□□ 0.25
LEMD3-201ENST00000308330 CCNT1O60563 726 aaKnown RBP16.58■□□□□ 0.25
LEMD3-201ENST00000308330 DNAJC6O75061 913 aa16.58■□□□□ 0.25
LEMD3-201ENST00000308330 MYBL1P10243 752 aa16.58■□□□□ 0.25
LEMD3-201ENST00000308330 CCDC15Q0P6D6 951 aa16.58■□□□□ 0.25
LEMD3-201ENST00000308330 RASGRF1Q13972 1273 aa16.58■□□□□ 0.25
LEMD3-201ENST00000308330 ZSCAN10Q96SZ4 725 aaPredicted RBP16.58■□□□□ 0.25
LEMD3-201ENST00000308330 VCPKMTQ9H867 229 aa16.58■□□□□ 0.25
LEMD3-201ENST00000308330 RNF181Q9P0P0 153 aa16.58■□□□□ 0.25
LEMD3-201ENST00000308330 ITM2BQ9Y287 266 aa16.58■□□□□ 0.25
LEMD3-201ENST00000308330 GMNCA6NCL1 334 aa16.58■□□□□ 0.24
LEMD3-201ENST00000308330 KLRF2D3W0D1 207 aa16.58■□□□□ 0.24
LEMD3-201ENST00000308330 CD2BP2O95400 341 aaKnown RBP16.58■□□□□ 0.24
LEMD3-201ENST00000308330 PDHBP11177 359 aa16.58■□□□□ 0.24
LEMD3-201ENST00000308330 KCNA3P22001 575 aa16.58■□□□□ 0.24
LEMD3-201ENST00000308330 CCT6AP40227 531 aaKnown RBP16.58■□□□□ 0.24
LEMD3-201ENST00000308330 TSPY1Q01534 308 aa16.58■□□□□ 0.24
LEMD3-201ENST00000308330 BICDL2A1A5D9 508 aa16.58■□□□□ 0.24
LEMD3-201ENST00000308330 KRT4P19013 534 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms