RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 SPOUT1Q5T280 376 aaKnown RBP17.38■□□□□ 0.37
USP42-201ENST00000306177 FAM160B2Q86V87 743 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 ARHGEF2Q92974 986 aaKnown RBP17.38■□□□□ 0.37
USP42-201ENST00000306177 TRIM11Q96F44 468 aa17.38■□□□□ 0.37
USP42-201ENST00000306177 NOL3O60936 208 aaKnown RBP17.37■□□□□ 0.37
USP42-201ENST00000306177 ATF2P15336 505 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 BFSP1Q12934 665 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 TBC1D10CQ8IV04 446 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 FAM81BQ96LP2 452 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 OVOS2A0A0G2JMS6 1433 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 OVOS2A0A0J9YW53 1432 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 OVOS2Q6IE36 1432 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 CELF1Q92879 486 aaKnown RBP17.37■□□□□ 0.37
USP42-201ENST00000306177 ANO3Q9BYT9 981 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 A0A087WWV3 80 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 NBPF26B4DH59 902 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 KIF11P52732 1056 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 TOB2Q14106 344 aaPredicted RBP17.37■□□□□ 0.37
USP42-201ENST00000306177 KIF22Q14807 665 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 UBE2SQ16763 222 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 NBPF10Q6P3W6 841 aaKnown RBP17.37■□□□□ 0.37
USP42-201ENST00000306177 NBPF15Q8N660 670 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 CEP170P1Q96L14 293 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 EMILIN3Q9NT22 766 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 PCDHB4Q9Y5E5 795 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 RFX7Q2KHR2 1363 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 MEIS1O00470 390 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 THAP12O43422 761 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 PLEKHA8P1O95397 391 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 MAN1A1P33908 653 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 GOLGA8FQ08AF8 430 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 GOLGA8DPQ0D2H9 430 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 SAMSN1Q9NSI8 373 aaKnown RBP17.37■□□□□ 0.37
USP42-201ENST00000306177 CRB1P82279 1406 aa17.37■□□□□ 0.37
USP42-201ENST00000306177 OSBPP22059 807 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 TBC1D9BQ66K14 1250 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 TMTC3Q6ZXV5 915 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 CACTINQ8WUQ7 758 aaKnown RBP17.36■□□□□ 0.37
USP42-201ENST00000306177 MED4Q9NPJ6 270 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 TLR3O15455 904 aaKnown RBP17.36■□□□□ 0.37
USP42-201ENST00000306177 PLA2G4BP0C869 781 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 TROVE2P10155 538 aaKnown RBP eCLIP17.36■□□□□ 0.37
USP42-201ENST00000306177 GNGT1P63211 74 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 APBA1Q02410 837 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 MESDQ14696 234 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 DPP9Q86TI2 863 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 CCDC13Q8IYE1 715 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 EXOC8Q8IYI6 725 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 SH3RF3Q8TEJ3 882 aaPredicted RBP17.36■□□□□ 0.37
USP42-201ENST00000306177 EPSTI1Q96J88 318 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 AFF2P51816 1311 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 XPOTO43592 962 aaKnown RBP17.36■□□□□ 0.37
USP42-201ENST00000306177 VSTM4Q8IW00 320 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 ZNF148Q9UQR1 794 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 CLIC2O15247 247 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 CNGA1P29973 690 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 GUCY2DQ02846 1103 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 SEPT14Q6ZU15 432 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 SESTD1Q86VW0 696 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 ANKRD36BP1Q96IX9 119 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 PARVGQ9HBI0 331 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 ZNF277Q9NRM2 450 aaPredicted RBP17.36■□□□□ 0.37
USP42-201ENST00000306177 C1orf167Q5SNV9 1468 aa17.36■□□□□ 0.37
USP42-201ENST00000306177 DISC1Q9NRI5 854 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 ENC1O14682 589 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 PNMA8AQ86V59 439 aaPredicted RBP17.35■□□□□ 0.37
USP42-201ENST00000306177 MAP7D3Q8IWC1 876 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 PHLPP2Q6ZVD8 1323 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 WDR19Q8NEZ3 1342 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 LPXNO60711 386 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 TMEM179Q6ZVK1 233 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 RTKN2Q8IZC4 609 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 CYP2D6P10635 497 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 ADRA2BP18089 450 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 ZBED6P86452 979 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 KMT5BQ4FZB7 885 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 TTLL6Q8N841 843 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 NEDD4P46934 1319 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 STK36Q9NRP7 1315 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 CPDO75976 1380 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 PTPRMP28827 1452 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 DIP2CQ9Y2E4 1556 aa17.35■□□□□ 0.37
USP42-201ENST00000306177 NAA35Q5VZE5 725 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 RINT1Q6NUQ1 792 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 INO80B-WBP1J3KQ70 363 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 LMNB2Q03252 620 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 PPP1R2P3Q6NXS1 205 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 CCDC170Q8IYT3 715 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 INO80BQ9C086 356 aaPredicted RBP17.34■□□□□ 0.37
USP42-201ENST00000306177 PPP2R5CQ13362 524 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 KAZNQ674X7 775 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 CFAP57Q96MR6 1250 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 RILPQ96NA2 401 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 FAM193BQ96PV7 902 aaPredicted RBP17.34■□□□□ 0.37
USP42-201ENST00000306177 RASSF2P50749 326 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 FOXO4P98177 505 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 LRRC63Q05C16 580 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 TRIM28Q13263 835 aaKnown RBP17.34■□□□□ 0.37
USP42-201ENST00000306177 RESP18Q5W5W9 173 aa17.34■□□□□ 0.37
USP42-201ENST00000306177 FAM71BQ8TC56 605 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms