RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 SLF1Q9BQI6 1058 aa15.82■□□□□ 0.12
RAB40A-201ENST00000304236 ARFGAP3Q9NP61 516 aa15.82■□□□□ 0.12
RAB40A-201ENST00000304236 ZNHIT6Q9NWK9 470 aaKnown RBP15.82■□□□□ 0.12
RAB40A-201ENST00000304236 PNMA6FA0A0J9YX94 578 aa15.81■□□□□ 0.12
RAB40A-201ENST00000304236 NF2P35240 595 aa15.81■□□□□ 0.12
RAB40A-201ENST00000304236 TXKP42681 527 aa15.81■□□□□ 0.12
RAB40A-201ENST00000304236 MEA1Q16626 185 aa15.81■□□□□ 0.12
RAB40A-201ENST00000304236 FIGNQ5HY92 759 aa15.81■□□□□ 0.12
RAB40A-201ENST00000304236 ANKRD40Q6AI12 368 aa15.81■□□□□ 0.12
RAB40A-201ENST00000304236 CC2D1AQ6P1N0 951 aaPredicted RBP15.81■□□□□ 0.12
RAB40A-201ENST00000304236 UNC13DQ70J99 1090 aa15.81■□□□□ 0.12
RAB40A-201ENST00000304236 NAP1L4Q99733 375 aaKnown RBP15.81■□□□□ 0.12
RAB40A-201ENST00000304236 PARD6BQ9BYG5 372 aa15.81■□□□□ 0.12
RAB40A-201ENST00000304236 SAGE1Q9NXZ1 904 aa15.81■□□□□ 0.12
RAB40A-201ENST00000304236 SCAF8Q9UPN6 1271 aaKnown RBP15.81■□□□□ 0.12
RAB40A-201ENST00000304236 CCDC151A5D8V7 595 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 ABCB11O95342 1321 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 TUBBP07437 444 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 AKR1B1P15121 316 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 CYLC1P35663 651 aaPredicted RBP15.8■□□□□ 0.12
RAB40A-201ENST00000304236 MTIF2P46199 727 aaKnown RBP15.8■□□□□ 0.12
RAB40A-201ENST00000304236 TBC1D8BQ0IIM8 1120 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 STK4Q13043 487 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 TERF2Q15554 542 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 FKBP15Q5T1M5 1219 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 FRMPD2Q68DX3 1309 aaPredicted RBP15.8■□□□□ 0.12
RAB40A-201ENST00000304236 REM2Q8IYK8 340 aaPredicted RBP15.8■□□□□ 0.12
RAB40A-201ENST00000304236 CNOT6LQ96LI5 555 aaKnown RBP15.8■□□□□ 0.12
RAB40A-201ENST00000304236 CHP1Q99653 195 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 RIC8AQ9NPQ8 531 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 TMEM260Q9NX78 707 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 SERPINB13Q9UIV8 391 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 A0A0U1RQJ8 604 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 A0A1W2PQJ5 194 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 ZBED6P86452 979 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 ZNF543Q08ER8 600 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 GRB10Q13322 594 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 PICALMQ13492 652 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 GPATCH4Q5T3I0 446 aaKnown RBP15.8■□□□□ 0.12
RAB40A-201ENST00000304236 PPP4R3AQ6IN85 833 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 CENPPQ6IPU0 288 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 FOXR2Q6PJQ5 311 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 APOBEC3FQ8IUX4 373 aaKnown RBP15.8■□□□□ 0.12
RAB40A-201ENST00000304236 ZSCAN29Q8IWY8 852 aaPredicted RBP15.8■□□□□ 0.12
RAB40A-201ENST00000304236 CCDC170Q8IYT3 715 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 EHBP1Q8NDI1 1231 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 ATRIPQ8WXE1 791 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 ERGIC2Q96RQ1 377 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 GLT8D2Q9H1C3 349 aa15.8■□□□□ 0.12
RAB40A-201ENST00000304236 B4DLN1 442 aa15.79■□□□□ 0.12
RAB40A-201ENST00000304236 HLA-DOAP06340 250 aa15.79■□□□□ 0.12
RAB40A-201ENST00000304236 MRPL12P52815 198 aaKnown RBP15.79■□□□□ 0.12
RAB40A-201ENST00000304236 CDK17Q00537 523 aa15.79■□□□□ 0.12
RAB40A-201ENST00000304236 PSMD2Q13200 908 aa15.79■□□□□ 0.12
RAB40A-201ENST00000304236 TTLL12Q14166 644 aaPredicted RBP15.79■□□□□ 0.12
RAB40A-201ENST00000304236 PRAMEF18Q5VWM3 479 aa15.79■□□□□ 0.12
RAB40A-201ENST00000304236 KRT79Q5XKE5 535 aa15.79■□□□□ 0.12
RAB40A-201ENST00000304236 HHIPL2Q6UWX4 724 aa15.79■□□□□ 0.12
RAB40A-201ENST00000304236 RASAL3Q86YV0 1011 aa15.79■□□□□ 0.12
RAB40A-201ENST00000304236 LRRC47Q8N1G4 583 aaKnown RBP15.79■□□□□ 0.12
RAB40A-201ENST00000304236 LARP4BQ92615 738 aaKnown RBP15.79■□□□□ 0.12
RAB40A-201ENST00000304236 COA7Q96BR5 231 aa15.79■□□□□ 0.12
RAB40A-201ENST00000304236 NOC4LQ9BVI4 516 aaKnown RBP15.79■□□□□ 0.12
RAB40A-201ENST00000304236 TTYH3Q9C0H2 523 aa15.79■□□□□ 0.12
RAB40A-201ENST00000304236 USP40Q9NVE5 1235 aa15.79■□□□□ 0.12
RAB40A-201ENST00000304236 PAPPA2Q9BXP8 1791 aa15.79■□□□□ 0.12
RAB40A-201ENST00000304236 SLC26A4O43511 780 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 TRIM21P19474 475 aaKnown RBP15.78■□□□□ 0.12
RAB40A-201ENST00000304236 PLA2G4AP47712 749 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 SEPT2Q15019 361 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 GUF1Q8N442 669 aaKnown RBP15.78■□□□□ 0.12
RAB40A-201ENST00000304236 MSANTD4Q8NCY6 345 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 HNRNPLLQ8WVV9 542 aaKnown RBP15.78■□□□□ 0.12
RAB40A-201ENST00000304236 CUL5Q93034 780 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 PNMA5Q96PV4 448 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 CSRNP1Q96S65 589 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 BLOC1S4Q9NUP1 217 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 CTAGE15A4D2H0 777 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 IPO7O95373 1038 aaKnown RBP15.78■□□□□ 0.12
RAB40A-201ENST00000304236 CTAGE8P0CG41 777 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 FCER1AP12319 257 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 GCFC2P16383 781 aaKnown RBP15.78■□□□□ 0.12
RAB40A-201ENST00000304236 DLGAP5Q15398 846 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 WDR59Q6PJI9 974 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 MOB2Q70IA6 237 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 ZNF771Q7L3S4 317 aaPredicted RBP15.78■□□□□ 0.12
RAB40A-201ENST00000304236 CTAGE6Q86UF2 777 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 CTAGE4Q8IX94 777 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 KIAA0895Q8NCT3 520 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 RAD54LQ92698 747 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 ZBED3Q96IU2 234 aaPredicted RBP15.78■□□□□ 0.12
RAB40A-201ENST00000304236 CCDC17Q96LX7 622 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 JMJD4Q9H9V9 463 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 GPCPD1Q9NPB8 672 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 RNF186Q9NXI6 227 aa15.78■□□□□ 0.12
RAB40A-201ENST00000304236 REXO2Q9Y3B8 237 aaKnown RBP15.78■□□□□ 0.12
RAB40A-201ENST00000304236 MYMKA6NI61 221 aa15.77■□□□□ 0.12
RAB40A-201ENST00000304236 EIF3CLB5ME19 914 aaKnown RBP15.77■□□□□ 0.12
RAB40A-201ENST00000304236 TRPA1O75762 1119 aa15.77■□□□□ 0.12
RAB40A-201ENST00000304236 TBC1D8O95759 1140 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms