RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 C16orf87Q6PH81 154 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 EFCAB13Q8IY85 973 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 YY1AP1Q9H869 796 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 A6NNZ2 444 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 MYO1FO00160 1098 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 TUBB8Q3ZCM7 444 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 PLA2G4DQ86XP0 818 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 ATXN7L3BQ96GX2 97 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 TRPC5Q9UL62 973 aaPredicted RBP13.39□□□□□ -0.27
ABCA3-201ENST00000301732 SH3TC1Q8TE82 1336 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 EXOC1LA0A1B0GW35 172 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 UBAP1LF5GYI3 381 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 MARK3P27448 753 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 PDCD2Q16342 344 aaPredicted RBP13.39□□□□□ -0.27
ABCA3-201ENST00000301732 LPIN2Q92539 896 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 ERBB4Q15303 1308 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 HLA-DPA1P20036 260 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 YWHAHQ04917 246 aaPredicted RBP13.39□□□□□ -0.27
ABCA3-201ENST00000301732 ZBTB17Q13105 803 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 FAM98CQ17RN3 349 aaKnown RBP13.39□□□□□ -0.27
ABCA3-201ENST00000301732 HAUS4Q9H6D7 363 aa13.39□□□□□ -0.27
ABCA3-201ENST00000301732 HNRNPDLO14979 420 aaKnown RBP13.38□□□□□ -0.27
ABCA3-201ENST00000301732 TNNC2P02585 160 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 MT-ND3P03897 115 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 OCRLQ01968 901 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 ZNF211Q13398 564 aaPredicted RBP13.38□□□□□ -0.27
ABCA3-201ENST00000301732 FAM26FQ5R3K3 315 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 CATSPER3Q86XQ3 398 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 KCTD6Q8NC69 237 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 GABPB2Q8TAK5 448 aaPredicted RBP13.38□□□□□ -0.27
ABCA3-201ENST00000301732 FBXL5Q9UKA1 691 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 GGCXP38435 758 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 BCAP29Q9UHQ4 241 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 NSD2O96028 1365 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 MAFGO15525 162 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 AFPP02771 609 aaKnown RBP13.38□□□□□ -0.27
ABCA3-201ENST00000301732 NEK8Q86SG6 692 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 RETREG2Q8NC44 543 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 PSPC1Q8WXF1 523 aaKnown RBP13.38□□□□□ -0.27
ABCA3-201ENST00000301732 ZC4H2Q9NQZ6 224 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 ANKRD20A4Q4UJ75 823 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 ANKRD20A8PQ5CZ79 823 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 ANKRD20A2Q5SQ80 823 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 ANKRD20A1Q5TYW2 823 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 RABGGTAQ92696 567 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 PARD3Q8TEW0 1356 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 E2F8A0AVK6 867 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 PRAMEF22A3QJZ6 481 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 GDF11O95390 407 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 CA4P22748 312 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 CMA1P23946 247 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 TFAMQ00059 246 aaKnown RBP13.38□□□□□ -0.27
ABCA3-201ENST00000301732 GPR101Q96P66 508 aaPredicted RBP13.38□□□□□ -0.27
ABCA3-201ENST00000301732 TTC1Q99614 292 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 TRAIPQ9BWF2 469 aa13.38□□□□□ -0.27
ABCA3-201ENST00000301732 RPRD2Q5VT52 1461 aaKnown RBP13.38□□□□□ -0.27
ABCA3-201ENST00000301732 MTM1Q13496 603 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 KRT31Q15323 416 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 TRIM67Q6ZTA4 783 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.37□□□□□ -0.27
ABCA3-201ENST00000301732 TYW1Q9NV66 732 aaKnown RBP13.37□□□□□ -0.27
ABCA3-201ENST00000301732 PPARGC1AQ9UBK2 798 aaKnown RBP13.37□□□□□ -0.27
ABCA3-201ENST00000301732 SNX24Q9Y343 169 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 ZMYM6O95789 1325 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 TRIM49BA6NDI0 452 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 M0QZ92 97 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 MYO1CO00159 1063 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 PNMA6AP0CW24 399 aaPredicted RBP13.37□□□□□ -0.27
ABCA3-201ENST00000301732 RINT1Q6NUQ1 792 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 MAIP1Q8WWC4 291 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 ZNF496Q96IT1 587 aaPredicted RBP13.37□□□□□ -0.27
ABCA3-201ENST00000301732 DCAF5Q96JK2 942 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 TRPV6Q9H1D0 765 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 GCNT4Q9P109 453 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 STRIP2Q9ULQ0 834 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 SCG2P13521 617 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 STX1BP61266 288 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 SKOR1P84550 965 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 DMP1Q13316 513 aaPredicted RBP13.37□□□□□ -0.27
ABCA3-201ENST00000301732 CROCCP2Q86T23 111 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 TDRD7Q8NHU6 1098 aaKnown RBP13.37□□□□□ -0.27
ABCA3-201ENST00000301732 NCLNQ969V3 563 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 SUCLA2Q9P2R7 463 aaPredicted RBP13.37□□□□□ -0.27
ABCA3-201ENST00000301732 HMGXB3Q12766 1538 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 ADGRL1O94910 1474 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 HNRNPCL2B2RXH8 293 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 HNRNPCL1O60812 293 aaKnown RBP13.37□□□□□ -0.27
ABCA3-201ENST00000301732 NOP14P78316 857 aaKnown RBP13.37□□□□□ -0.27
ABCA3-201ENST00000301732 FAM182BQ5T319 152 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 PCDHA13Q9Y5I0 950 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 H7C1D1 291 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 GARSP41250 739 aaKnown RBP13.37□□□□□ -0.27
ABCA3-201ENST00000301732 PSMC1P62191 440 aaKnown RBP13.37□□□□□ -0.27
ABCA3-201ENST00000301732 ESRRGP62508 458 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 EPS15L1Q9UBC2 864 aa13.37□□□□□ -0.27
ABCA3-201ENST00000301732 ADCY9O60503 1353 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 ARL8AQ96BM9 186 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 IWS1Q96ST2 819 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 CPVLQ9H3G5 476 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 AKT3Q9Y243 479 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms