RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 TOM1L1O75674 476 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 HEXIM1O94992 359 aaKnown RBP14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 PDE8BO95263 885 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 PDZD4Q76G19 769 aaPredicted RBP14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 RSRC2Q7L4I2 434 aaKnown RBP14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 KCTD6Q8NC69 237 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ASPHQ12797 758 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 P2RX5Q93086 422 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ZWILCHQ9H900 591 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SART1O43290 800 aaKnown RBP14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 CPP00450 1065 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 TCP11X2Q5H9J9 407 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 DCAF15Q66K64 600 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 DNAAF3Q8N9W5 541 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 CEP170P1Q96L14 293 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 CALN1Q9BXU9 219 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 HAUS4Q9H6D7 363 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ZBTB1Q9Y2K1 713 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 BLMP54132 1417 aaPredicted RBP14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 TTLL1O95922 423 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ETF1P62495 437 aaKnown RBP14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 MUM1L1Q5H9M0 696 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 NSUN7Q8NE18 718 aaKnown RBP14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 IQCDQ96DY2 449 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 LOC102724428A0A0B4J2F2 783 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 LMNB1P20700 586 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SIK1P57059 783 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 RNF217Q8TC41 542 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 HVCN1Q96D96 273 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ARHGAP4P98171 946 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SMAD1Q15797 465 aaKnown RBP14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 PHLDB3Q6NSJ2 640 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 MIS18BP1Q6P0N0 1132 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 APOA5Q6Q788 366 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 FAN1Q9Y2M0 1017 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 PCDHB6Q9Y5E3 794 aa14.73□□□□□ -0.05
CHRFAM7A-201ENST00000299847 KIAA0232Q92628 1395 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SNCBQ16143 134 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 KRT26Q7Z3Y9 468 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SCYL3Q8IZE3 742 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 POLD4Q9HCU8 107 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 IRAK4Q9NWZ3 460 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SRGAP2CP0DJJ0 459 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 POLR2BP30876 1174 aaKnown RBP14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 RNASELQ05823 741 aaKnown RBP14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ZMYM1Q5SVZ6 1142 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 DPY19L2Q6NUT2 758 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 TRIML1Q8N9V2 468 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 CDKL2Q92772 493 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 AMNQ9BXJ7 453 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 BAG5Q9UL15 447 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 WDR62O43379 1518 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 GPC4O75487 556 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 BAG6P46379 1132 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 KCTD2Q14681 263 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ABI1Q8IZP0 508 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 NBPF3Q9H094 633 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 XAB2Q9HCS7 855 aaKnown RBP14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 HABP4Q5JVS0 413 aaKnown RBP14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 NHEJ1Q9H9Q4 299 aaPredicted RBP14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 TRPA1O75762 1119 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 TFDP1Q14186 410 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 OR6B2Q6IFH4 312 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ACCSQ96QU6 501 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 TCOF1Q13428 1488 aaKnown RBP14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 PTPRTO14522 1441 aa14.72□□□□□ -0.05
CHRFAM7A-201ENST00000299847 CFAP43Q8NDM7 1665 aa14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 GNGT2O14610 69 aa14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 FBXO18Q8NFZ0 1043 aa14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 IPO11Q9UI26 975 aaKnown RBP14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 MYOM2P54296 1465 aa14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 NVLO15381 856 aaKnown RBP14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 VCX3AQ9NNX9 186 aa14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 BCAP29Q9UHQ4 241 aa14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SSH2Q76I76 1423 aa14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 CCND2P30279 289 aa14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ZBTB41Q5SVQ8 909 aa14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 C10orf76Q5T2E6 689 aa14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 MARCH10Q8NA82 808 aaPredicted RBP14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 PPWD1Q96BP3 646 aaKnown RBP14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 XPAP23025 273 aaPredicted RBP14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ZNF658Q5TYW1 1059 aaPredicted RBP14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 TCP11Q8WWU5 503 aa14.71□□□□□ -0.05
CHRFAM7A-201ENST00000299847 XDHP47989 1333 aa14.71□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ARHGEF12Q9NZN5 1544 aa14.71□□□□□ -0.06
CHRFAM7A-201ENST00000299847 EIF4A3P38919 411 aaKnown RBP14.71□□□□□ -0.06
CHRFAM7A-201ENST00000299847 IL9RQ01113 521 aa14.71□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MAP4K1Q92918 833 aa14.71□□□□□ -0.06
CHRFAM7A-201ENST00000299847 HEXIM2Q96MH2 286 aaKnown RBP14.71□□□□□ -0.06
CHRFAM7A-201ENST00000299847 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PLS3P13797 630 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ZNF18P17022 549 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 GALNT17Q6IS24 598 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 DEPDC1BQ8WUY9 529 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SDCCAG3Q96C92 435 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MRFAP1L1Q96HT8 127 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PLCG1P19174 1290 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MSH2P43246 934 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 INPP1P49441 399 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 HDLBPQ00341 1268 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms