RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 HUNKP57058 714 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 SWSAP1Q6NVH7 229 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 P2RX5Q93086 422 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 TIGD1Q96MW7 591 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 MAP7D2Q96T17 732 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 KMT5AQ9NQR1 393 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 GRIN3BO60391 1043 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 DDIT3P35638 169 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 COPB1P53618 953 aaKnown RBP11.22□□□□□ -0.61
GABRB3-201ENST00000299267 HDLBPQ00341 1268 aaKnown RBP11.22□□□□□ -0.61
GABRB3-201ENST00000299267 ARID5BQ14865 1188 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 STXBP2Q15833 593 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 ASIC2Q16515 512 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 ZBTB8OSQ8IWT0 167 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 ANKRD62A6NC57 917 aa11.21□□□□□ -0.61
GABRB3-201ENST00000299267 CSPG5O95196 566 aa11.21□□□□□ -0.61
GABRB3-201ENST00000299267 RHOXF2BP0C7M4 288 aa11.21□□□□□ -0.61
GABRB3-201ENST00000299267 U2AF2P26368 475 aaKnown RBP eCLIP11.21□□□□□ -0.61
GABRB3-201ENST00000299267 CASP14P31944 242 aa11.21□□□□□ -0.61
GABRB3-201ENST00000299267 SLC9C1Q4G0N8 1177 aa11.21□□□□□ -0.61
GABRB3-201ENST00000299267 ZBTB33Q86T24 672 aa11.21□□□□□ -0.61
GABRB3-201ENST00000299267 RHOXF2Q9BQY4 288 aa11.21□□□□□ -0.61
GABRB3-201ENST00000299267 PNMA2Q9UL42 364 aa11.21□□□□□ -0.61
GABRB3-201ENST00000299267 FAM205AQ6ZU69 1335 aa11.21□□□□□ -0.61
GABRB3-201ENST00000299267 CELF2O95319 508 aaKnown RBP11.21□□□□□ -0.61
GABRB3-201ENST00000299267 ZNF658Q5TYW1 1059 aaPredicted RBP11.21□□□□□ -0.61
GABRB3-201ENST00000299267 CCDC50Q8IVM0 306 aa11.21□□□□□ -0.61
GABRB3-201ENST00000299267 DNAI2Q9GZS0 605 aa11.21□□□□□ -0.61
GABRB3-201ENST00000299267 MYO1AQ9UBC5 1043 aa11.21□□□□□ -0.61
GABRB3-201ENST00000299267 PNMA3Q9UL41 463 aa11.21□□□□□ -0.61
GABRB3-201ENST00000299267 MRC1P22897 1456 aa11.21□□□□□ -0.61
GABRB3-201ENST00000299267 GOLGA6L10A6NI86 522 aa11.21□□□□□ -0.62
GABRB3-201ENST00000299267 SHMT1P34896 483 aa11.21□□□□□ -0.62
GABRB3-201ENST00000299267 CLCN1P35523 988 aa11.21□□□□□ -0.62
GABRB3-201ENST00000299267 ZNF157P51786 506 aaPredicted RBP11.21□□□□□ -0.62
GABRB3-201ENST00000299267 ST3GAL1Q11201 340 aa11.21□□□□□ -0.62
GABRB3-201ENST00000299267 CYP26C1Q6V0L0 522 aa11.21□□□□□ -0.62
GABRB3-201ENST00000299267 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.21□□□□□ -0.62
GABRB3-201ENST00000299267 ACAD9Q9H845 621 aa11.21□□□□□ -0.62
GABRB3-201ENST00000299267 PARVGQ9HBI0 331 aa11.21□□□□□ -0.62
GABRB3-201ENST00000299267 RIC8AQ9NPQ8 531 aa11.21□□□□□ -0.62
GABRB3-201ENST00000299267 STK17AQ9UEE5 414 aa11.21□□□□□ -0.62
GABRB3-201ENST00000299267 ROBO1Q9Y6N7 1651 aa11.21□□□□□ -0.62
GABRB3-201ENST00000299267 SHTN1A0MZ66 631 aa11.21□□□□□ -0.62
GABRB3-201ENST00000299267 SHROOM1Q2M3G4 852 aaPredicted RBP11.21□□□□□ -0.62
GABRB3-201ENST00000299267 CEP55Q53EZ4 464 aa11.21□□□□□ -0.62
GABRB3-201ENST00000299267 OR8K1Q8NGG5 319 aa11.21□□□□□ -0.62
GABRB3-201ENST00000299267 ST7Q9NRC1 585 aa11.21□□□□□ -0.62
GABRB3-201ENST00000299267 BCCIPQ9P287 314 aaKnown RBP eCLIP11.21□□□□□ -0.62
GABRB3-201ENST00000299267 GABBR1Q9UBS5 961 aa11.21□□□□□ -0.62
GABRB3-201ENST00000299267 M0QZ92 97 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 CRY2Q49AN0 593 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 FAM160B1Q5W0V3 765 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 CYFIP1Q7L576 1253 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 KCNB2Q92953 911 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 CDHR1Q96JP9 859 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 CEP83Q9Y592 693 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 AKAP12Q02952 1782 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 NPHP3-ACAD11A0A0J9YXS1 232 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 CTAGE15A4D2H0 777 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 ADM5C9JUS6 153 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 LRRN2O75325 713 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 CTAGE8P0CG41 777 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 FCER1AP12319 257 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 RPS12P25398 132 aaKnown RBP11.2□□□□□ -0.62
GABRB3-201ENST00000299267 TMOD1P28289 359 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 RHBDL3P58872 404 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 ATP2C1P98194 919 aaPredicted RBP11.2□□□□□ -0.62
GABRB3-201ENST00000299267 FKBP3Q00688 224 aaKnown RBP11.2□□□□□ -0.62
GABRB3-201ENST00000299267 SMC1AQ14683 1233 aaKnown RBP11.2□□□□□ -0.62
GABRB3-201ENST00000299267 MIS18BP1Q6P0N0 1132 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 CTAGE6Q86UF2 777 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 SFR1Q86XK3 245 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 CTAGE4Q8IX94 777 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 EHBP1Q8NDI1 1231 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 NLGN2Q8NFZ4 835 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 TEX13BQ9BXU2 312 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 GLIS2Q9BZE0 524 aaPredicted RBP11.2□□□□□ -0.62
GABRB3-201ENST00000299267 AP5M1Q9H0R1 490 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 FBXO2Q9UK22 296 aaPredicted RBP11.2□□□□□ -0.62
GABRB3-201ENST00000299267 PRCPP42785 496 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 TSC1Q92574 1164 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 MMS19Q96T76 1030 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 HINFPQ9BQA5 517 aa11.2□□□□□ -0.62
GABRB3-201ENST00000299267 POLR3GO15318 223 aaPredicted RBP11.19□□□□□ -0.62
GABRB3-201ENST00000299267 NFX1Q12986 1120 aaKnown RBP11.19□□□□□ -0.62
GABRB3-201ENST00000299267 LLGL1Q15334 1064 aa11.19□□□□□ -0.62
GABRB3-201ENST00000299267 SFMBT2Q5VUG0 894 aa11.19□□□□□ -0.62
GABRB3-201ENST00000299267 CDAN1Q8IWY9 1227 aa11.19□□□□□ -0.62
GABRB3-201ENST00000299267 CUEDC2Q9H467 287 aa11.19□□□□□ -0.62
GABRB3-201ENST00000299267 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.19□□□□□ -0.62
GABRB3-201ENST00000299267 PYCARDQ9ULZ3 195 aa11.19□□□□□ -0.62
GABRB3-201ENST00000299267 USTQ9Y2C2 406 aa11.19□□□□□ -0.62
GABRB3-201ENST00000299267 PHLPP1O60346 1717 aa11.19□□□□□ -0.62
GABRB3-201ENST00000299267 ANKRD26Q9UPS8 1709 aa11.19□□□□□ -0.62
GABRB3-201ENST00000299267 PALM3A6NDB9 673 aaPredicted RBP11.19□□□□□ -0.62
GABRB3-201ENST00000299267 WDR46O15213 610 aaKnown RBP11.19□□□□□ -0.62
GABRB3-201ENST00000299267 EPHX2P34913 555 aa11.19□□□□□ -0.62
GABRB3-201ENST00000299267 IFI16Q16666 785 aaKnown RBP11.19□□□□□ -0.62
GABRB3-201ENST00000299267 KIAA0753Q2KHM9 967 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms