RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 TMC6Q7Z403 805 aa8.43□□□□□ -1.06
TRIM42-201ENST00000286349 NEK8Q86SG6 692 aa8.43□□□□□ -1.06
TRIM42-201ENST00000286349 KRT222Q8N1A0 295 aa8.43□□□□□ -1.06
TRIM42-201ENST00000286349 REXO1Q8N1G1 1221 aaKnown RBP8.43□□□□□ -1.06
TRIM42-201ENST00000286349 NAP1L4Q99733 375 aaKnown RBP8.43□□□□□ -1.06
TRIM42-201ENST00000286349 GLIS2Q9BZE0 524 aaPredicted RBP8.43□□□□□ -1.06
TRIM42-201ENST00000286349 HSD3B7Q9H2F3 369 aa8.43□□□□□ -1.06
TRIM42-201ENST00000286349 PITPNM2Q9BZ72 1349 aa8.43□□□□□ -1.06
TRIM42-201ENST00000286349 SCN4AP35499 1836 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 ATRNL1Q5VV63 1379 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 PNMA6FA0A0J9YX94 578 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 USP17L5A8MUK1 530 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 ITGBL1O95965 494 aaPredicted RBP8.42□□□□□ -1.06
TRIM42-201ENST00000286349 GOLGA8HP0CJ92 632 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 AKR1B1P15121 316 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 BMP6P22004 513 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 BDNFP23560 247 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 HOXA7P31268 230 aaPredicted RBP8.42□□□□□ -1.06
TRIM42-201ENST00000286349 SHMT1P34896 483 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 STAT6P42226 847 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 PSMD2Q13200 908 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 RRP1BQ14684 758 aaKnown RBP8.42□□□□□ -1.06
TRIM42-201ENST00000286349 SLC35G1Q2M3R5 365 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 TBC1D25Q3MII6 688 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 TYW1BQ6NUM6 668 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 DNAJC18Q9H819 358 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 DISC1Q9NRI5 854 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 FANCLQ9NW38 375 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 FZD1Q9UP38 647 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 CLEC11AQ9Y240 323 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 NFE2L3Q9Y4A8 694 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 COMMD10Q9Y6G5 202 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 MYH8P13535 1937 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 A0A087X0B3 334 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 FAM196BA6NMK8 535 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 WNT7AO00755 349 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 OR52Z1P0C646 297 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 ZNF18P17022 549 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 UBA7P41226 1012 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 PPP1R2P41236 205 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 AFMP43652 599 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 ADCY7P51828 1080 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 MAP3K10Q02779 954 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 ZNF543Q08ER8 600 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 LRMPQ12912 555 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 INF2Q27J81 1249 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 SPATA1Q5VX52 437 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 PDXDC2PQ6P474 469 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 KRT26Q7Z3Y9 468 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 LDHDQ86WU2 507 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 HOMER1Q86YM7 354 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 VSTM4Q8IW00 320 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 DCAF4Q8WV16 495 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 CCDC47Q96A33 483 aaKnown RBP8.42□□□□□ -1.06
TRIM42-201ENST00000286349 DCPSQ96C86 337 aaKnown RBP8.42□□□□□ -1.06
TRIM42-201ENST00000286349 PIGSQ96S52 555 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 RAB34Q9BZG1 259 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 KANSL2Q9H9L4 492 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 NYAP2Q9P242 653 aa8.42□□□□□ -1.06
TRIM42-201ENST00000286349 CTIFO43310 598 aaKnown RBP8.41□□□□□ -1.06
TRIM42-201ENST00000286349 CCDC175P0C221 793 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 RPS6KA3P51812 740 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 JAG1P78504 1218 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 CCZ1BP86790 482 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 CCZ1P86791 482 aaPredicted RBP8.41□□□□□ -1.06
TRIM42-201ENST00000286349 SPAG1Q07617 926 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 PDIA5Q14554 519 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 RRAGBQ5VZM2 374 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 APOBEC3FQ8IUX4 373 aaKnown RBP8.41□□□□□ -1.06
TRIM42-201ENST00000286349 C17orf53Q8N3J3 647 aaPredicted RBP8.41□□□□□ -1.06
TRIM42-201ENST00000286349 RASSF8Q8NHQ8 419 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 TMOD2Q9NZR1 351 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 GREB1LQ9C091 1923 aaPredicted RBP8.41□□□□□ -1.06
TRIM42-201ENST00000286349 CCNT1O60563 726 aaKnown RBP8.41□□□□□ -1.06
TRIM42-201ENST00000286349 AMPD3Q01432 767 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 KCNB1Q14721 858 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 IL17AQ16552 155 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 TPD52L1Q16890 204 aaPredicted RBP8.41□□□□□ -1.06
TRIM42-201ENST00000286349 SHROOM1Q2M3G4 852 aaPredicted RBP8.41□□□□□ -1.06
TRIM42-201ENST00000286349 ZNF658Q5TYW1 1059 aaPredicted RBP8.41□□□□□ -1.06
TRIM42-201ENST00000286349 NAIF1Q69YI7 327 aaPredicted RBP8.41□□□□□ -1.06
TRIM42-201ENST00000286349 MIGA2Q7L4E1 593 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 C10orf67Q8IYJ2 551 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 GRAMD1CQ8IYS0 662 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 TXLNBQ8N3L3 684 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 RASGRP4Q8TDF6 673 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 RMDN2Q96LZ7 410 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 RIC8AQ9NPQ8 531 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 TMOD4Q9NZQ9 345 aa8.41□□□□□ -1.06
TRIM42-201ENST00000286349 SSC5DA1L4H1 1573 aa8.4□□□□□ -1.06
TRIM42-201ENST00000286349 TPM1P09493 284 aa8.4□□□□□ -1.06
TRIM42-201ENST00000286349 ATP1A3P13637 1013 aa8.4□□□□□ -1.06
TRIM42-201ENST00000286349 MRPL12P52815 198 aaKnown RBP8.4□□□□□ -1.06
TRIM42-201ENST00000286349 STIM1Q13586 685 aa8.4□□□□□ -1.06
TRIM42-201ENST00000286349 TMEM266Q2M3C6 531 aa8.4□□□□□ -1.06
TRIM42-201ENST00000286349 CERKLQ49MI3 558 aaPredicted RBP8.4□□□□□ -1.06
TRIM42-201ENST00000286349 CHADLQ6NUI6 762 aa8.4□□□□□ -1.06
TRIM42-201ENST00000286349 TATDN1Q6P1N9 297 aa8.4□□□□□ -1.06
TRIM42-201ENST00000286349 TMEM179Q6ZVK1 233 aa8.4□□□□□ -1.06
TRIM42-201ENST00000286349 FCHSD1Q86WN1 690 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms