RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 OR9Q1Q8NGQ5 310 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 LRRC8CQ8TDW0 803 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 GTF3C2Q8WUA4 911 aaPredicted RBP4.4□□□□□ -1.71
SCN3A-201ENST00000283254 PPWD1Q96BP3 646 aaKnown RBP4.4□□□□□ -1.71
SCN3A-201ENST00000283254 NEURL1BA8MQ27 555 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 NEMP1O14524 444 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 KRT38O76015 456 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 ECEL1O95672 775 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 CCDC15Q0P6D6 951 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 AP3B2Q13367 1082 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 E2F5Q15329 346 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 KYAT1Q16773 422 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 TTC23LQ6PF05 361 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 MAEAQ7L5Y9 396 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 CFAP61Q8NHU2 1237 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 NCKAP5LQ9HCH0 1330 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 PGRMC1O00264 195 aaKnown RBP4.4□□□□□ -1.71
SCN3A-201ENST00000283254 SUN1O94901 812 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 SRGAP2CP0DJJ0 459 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 KRT33BQ14525 404 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 ITPRIPL1Q6GPH6 555 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 TTBK2Q6IQ55 1244 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 PCGF5Q86SE9 256 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 MMTAG2Q9BU76 263 aaKnown RBP4.4□□□□□ -1.71
SCN3A-201ENST00000283254 CARD6Q9BX69 1037 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 ATP6V0A4Q9HBG4 840 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 KIAA1586Q9HCI6 787 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 PANK4Q9NVE7 773 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 EHD2Q9NZN4 543 aa4.4□□□□□ -1.71
SCN3A-201ENST00000283254 LOC102724428A0A0B4J2F2 783 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 GOLGA8KD6RF30 607 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 TXNDC9O14530 226 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 SIK1P57059 783 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 FKBP3Q00688 224 aaKnown RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 ARHGAP31Q2M1Z3 1444 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 CATSPER4Q7RTX7 472 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 TUBB6Q9BUF5 446 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 NCOA5Q9HCD5 579 aaKnown RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 VPS54Q9P1Q0 977 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 ITM2BQ9Y287 266 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 KIAA0556O60303 1618 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 ATP10BO94823 1461 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 FAM135BQ49AJ0 1406 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 GNGT2O14610 69 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 PFKFB2O60825 505 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 MOCS3O95396 460 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 FMNL1O95466 1100 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 LDHAP00338 332 aaKnown RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 PYGBP11216 843 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 CDC42EP1Q00587 391 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 MAP3K10Q02779 954 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 TMTC3Q6ZXV5 915 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 THEM5Q8N1Q8 247 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 URGCPQ8TCY9 931 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 SH3TC2Q8TF17 1288 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 TRERF1Q96PN7 1200 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 SERPINI1Q99574 410 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 SLF1Q9BQI6 1058 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 NLRC4Q9NPP4 1024 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 KMT5AQ9NQR1 393 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 FGFR1OP2Q9NVK5 253 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 PPP1R9AQ9ULJ8 1098 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 HPCAL4Q9UM19 191 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 PCDHB15Q9Y5E8 787 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 TRAPPC3O43617 180 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 CALB1P05937 261 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 CMA1P23946 247 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 PSMC2P35998 433 aaKnown RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 BCAMP50895 628 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 ORC2Q13416 577 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 CIAPIN1Q6FI81 312 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 CC2D1AQ6P1N0 951 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 ZNF577Q9BSK1 485 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 MXD3Q9BW11 206 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 MRPL40Q9NQ50 206 aaKnown RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 TXLNGQ9NUQ3 528 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 GON4LQ3T8J9 2241 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 E7EWF7 191 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 LRMPQ12912 555 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 MEI1Q5TIA1 1274 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 STAG1Q8WVM7 1258 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 ZFP91Q96JP5 570 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 SMYD2Q9NRG4 433 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 MRGBPQ9NV56 204 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 DNAJC17Q9NVM6 304 aaKnown RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 NDE1Q9NXR1 346 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 PCDHB4Q9Y5E5 795 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 TCP10L2B9ZVM9 353 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 KCNK3O14649 394 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 CRKLP46109 303 aaKnown RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 TIMM10P62072 90 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 CTDSPL2Q05D32 466 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 PSMD2Q13200 908 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 VEPH1Q14D04 833 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 SLC10A5Q5PT55 438 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 MFSD14CQ5VZR4 134 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 PPP1R18Q6NYC8 613 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 FOXP4Q8IVH2 680 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-201ENST00000283254 STX19Q8N4C7 294 aa4.39□□□□□ -1.71
SCN3A-201ENST00000283254 CCNYQ8ND76 341 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms