RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 CTTNQ14247 550 aaKnown RBP12.32□□□□□ -0.44
GGPS1-201ENST00000282841 PAGR1Q9BTK6 254 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 SLC39A2Q9NP94 309 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 RNF146Q9NTX7 359 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 KBTBD4Q9NVX7 518 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 PIK3CDO00329 1044 aa12.31□□□□□ -0.44
GGPS1-201ENST00000282841 SERPINC1P01008 464 aa12.31□□□□□ -0.44
GGPS1-201ENST00000282841 ITGB5P18084 799 aa12.31□□□□□ -0.44
GGPS1-201ENST00000282841 STK4Q13043 487 aa12.31□□□□□ -0.44
GGPS1-201ENST00000282841 LRRC41Q15345 812 aa12.31□□□□□ -0.44
GGPS1-201ENST00000282841 SYTL5Q8TDW5 730 aaPredicted RBP12.31□□□□□ -0.44
GGPS1-201ENST00000282841 PIGOQ8TEQ8 1089 aa12.31□□□□□ -0.44
GGPS1-201ENST00000282841 AK8Q96MA6 479 aa12.31□□□□□ -0.44
GGPS1-201ENST00000282841 TRIM9Q9C026 710 aa12.31□□□□□ -0.44
GGPS1-201ENST00000282841 GLT8D2Q9H1C3 349 aa12.31□□□□□ -0.44
GGPS1-201ENST00000282841 ZHX3Q9H4I2 956 aa12.31□□□□□ -0.44
GGPS1-201ENST00000282841 DOCK1Q14185 1865 aa12.31□□□□□ -0.44
GGPS1-201ENST00000282841 KLRC4O43908 158 aa12.31□□□□□ -0.44
GGPS1-201ENST00000282841 FOSP01100 380 aaPredicted RBP12.31□□□□□ -0.44
GGPS1-201ENST00000282841 FANCCQ00597 558 aa12.31□□□□□ -0.44
GGPS1-201ENST00000282841 PABPC4Q13310 644 aaKnown RBP eCLIP12.31□□□□□ -0.44
GGPS1-201ENST00000282841 COG2Q14746 738 aa12.31□□□□□ -0.44
GGPS1-201ENST00000282841 CATSPER3Q86XQ3 398 aa12.31□□□□□ -0.44
GGPS1-201ENST00000282841 RRAGCQ9HB90 399 aa12.31□□□□□ -0.44
GGPS1-201ENST00000282841 SPDYE16A6NNV3 312 aaPredicted RBP12.3□□□□□ -0.44
GGPS1-201ENST00000282841 GCFC2P16383 781 aaKnown RBP12.3□□□□□ -0.44
GGPS1-201ENST00000282841 SP4Q02446 784 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 PDE4DQ08499 809 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 SPIRE1Q08AE8 756 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 LARP4BQ92615 738 aaKnown RBP12.3□□□□□ -0.44
GGPS1-201ENST00000282841 GSDMAQ96QA5 445 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 KCNF1Q9H3M0 494 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 ZNF214Q9UL59 606 aaPredicted RBP12.3□□□□□ -0.44
GGPS1-201ENST00000282841 TELO2Q9Y4R8 837 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 CYP3A7-CYP3A51PA0A087WV96 503 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 PLA2G6O60733 806 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 CAVIN2O95810 425 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 CYP3A7P24462 503 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 DSG3P32926 999 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 FSTL1Q12841 308 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 RNF207Q6ZRF8 634 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 CATSPERGQ6ZRH7 1159 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 MLKLQ8NB16 471 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 CCDC34Q96HJ3 373 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 RMDN3Q96TC7 470 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 RAB34Q9BZG1 259 aa12.3□□□□□ -0.44
GGPS1-201ENST00000282841 IREB2P48200 963 aaKnown RBP12.29□□□□□ -0.44
GGPS1-201ENST00000282841 MRPS9P82933 396 aaKnown RBP12.29□□□□□ -0.44
GGPS1-201ENST00000282841 PDIA5Q14554 519 aa12.29□□□□□ -0.44
GGPS1-201ENST00000282841 CEP55Q53EZ4 464 aa12.29□□□□□ -0.44
GGPS1-201ENST00000282841 LRCH2Q5VUJ6 765 aa12.29□□□□□ -0.44
GGPS1-201ENST00000282841 SV2BQ7L1I2 683 aa12.29□□□□□ -0.44
GGPS1-201ENST00000282841 TPH2Q8IWU9 490 aa12.29□□□□□ -0.44
GGPS1-201ENST00000282841 ZNF577Q9BSK1 485 aa12.29□□□□□ -0.44
GGPS1-201ENST00000282841 FGFBP2Q9BYJ0 223 aa12.29□□□□□ -0.44
GGPS1-201ENST00000282841 BMP2KQ9NSY1 1161 aaPredicted RBP12.29□□□□□ -0.44
GGPS1-201ENST00000282841 PPP2R3BQ9Y5P8 575 aa12.29□□□□□ -0.44
GGPS1-201ENST00000282841 PITPNM2Q9BZ72 1349 aa12.29□□□□□ -0.44
GGPS1-201ENST00000282841 TESPA1A2RU30 521 aaPredicted RBP12.29□□□□□ -0.44
GGPS1-201ENST00000282841 SMTNL1A8MU46 457 aa12.29□□□□□ -0.44
GGPS1-201ENST00000282841 NKRFO15226 690 aaKnown RBP eCLIP12.29□□□□□ -0.44
GGPS1-201ENST00000282841 IRX3P78415 501 aaPredicted RBP12.29□□□□□ -0.44
GGPS1-201ENST00000282841 USP50Q70EL3 339 aaPredicted RBP12.29□□□□□ -0.44
GGPS1-201ENST00000282841 TMC6Q7Z403 805 aa12.29□□□□□ -0.44
GGPS1-201ENST00000282841 NELFBQ8WX92 580 aa12.29□□□□□ -0.44
GGPS1-201ENST00000282841 RAD54LQ92698 747 aa12.29□□□□□ -0.44
GGPS1-201ENST00000282841 DDX12PQ92771 950 aa12.29□□□□□ -0.44
GGPS1-201ENST00000282841 OPTNQ96CV9 577 aa12.29□□□□□ -0.44
GGPS1-201ENST00000282841 L3MBTL3Q96JM7 780 aaPredicted RBP12.29□□□□□ -0.44
GGPS1-201ENST00000282841 SYNRGQ9UMZ2 1314 aa12.29□□□□□ -0.44
GGPS1-201ENST00000282841 COL11A1P12107 1806 aaPredicted RBP12.28□□□□□ -0.44
GGPS1-201ENST00000282841 SFI1A8K8P3 1242 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 SPATA31C1P0DKV0 1188 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 HSD17B4P51659 736 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 UBASH3AP57075 661 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 Q4G0T1 1027 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 BPIFA3Q9BQP9 254 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 BTBD7Q9P203 1132 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 WRAP73Q9P2S5 460 aaPredicted RBP12.28□□□□□ -0.44
GGPS1-201ENST00000282841 VAV3Q9UKW4 847 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 TMEM150BA6NC51 233 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 C19orf81C9J6K1 198 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 ATP9AO75110 1047 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 GJA5P36382 358 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 CNTN2Q02246 1040 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 SMAP1Q8IYB5 467 aaPredicted RBP12.28□□□□□ -0.44
GGPS1-201ENST00000282841 ELOA2Q8IYF1 753 aaPredicted RBP12.28□□□□□ -0.44
GGPS1-201ENST00000282841 BANK1Q8NDB2 785 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 REPS2Q8NFH8 660 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 MBOAT7Q96N66 472 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 KCNH7Q9NS40 1196 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 PYCARDQ9ULZ3 195 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 GAS7O60861 476 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 TPD52L1Q16890 204 aaPredicted RBP12.28□□□□□ -0.44
GGPS1-201ENST00000282841 WDR78Q5VTH9 848 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 ARHGEF16Q5VV41 709 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 MAEAQ7L5Y9 396 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 DYDC2Q96IM9 177 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 INTS13Q9NVM9 706 aa12.28□□□□□ -0.44
GGPS1-201ENST00000282841 PHIPQ8WWQ0 1821 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms