RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ZFYVE19Q96K21 471 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 LCMT1Q9UIC8 334 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 ACEP12821 1306 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 DCAF15Q66K64 600 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 ABI1Q8IZP0 508 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 SIX6OS1Q8N1H7 587 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 ZNF653Q96CK0 615 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 DNAJC17Q9NVM6 304 aaKnown RBP9.41□□□□□ -0.9
NIPBL-201ENST00000282516 SMCO2A6NFE2 343 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 RASSF10A6NK89 507 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 H0YC42 278 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 DAB1O75553 588 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 TTC19Q6DKK2 380 aaPredicted RBP9.41□□□□□ -0.9
NIPBL-201ENST00000282516 DNAJC24Q6P3W2 148 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 MMTAG2Q9BU76 263 aaKnown RBP9.41□□□□□ -0.9
NIPBL-201ENST00000282516 ABCC12Q96J65 1359 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 KDM5BQ9UGL1 1544 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 EYA2O00167 538 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 CHGBP05060 677 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 GAP43P17677 238 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 ITGA6P23229 1130 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 PSMC1P62191 440 aaKnown RBP9.41□□□□□ -0.9
NIPBL-201ENST00000282516 TCP11X2Q5H9J9 407 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 ZNF408Q9H9D4 720 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 ZMYM6O95789 1325 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 GSNP06396 782 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 ESRRAP11474 423 aaPredicted RBP9.41□□□□□ -0.9
NIPBL-201ENST00000282516 C1orf228Q6PIY5 440 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 PHF21AQ96BD5 680 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 TRIM8Q9BZR9 551 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 ZNF229Q9UJW7 825 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 ATP8A1Q9Y2Q0 1164 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 PRPSAP2O60256 369 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 MED21Q13503 144 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 DTNBP1Q96EV8 351 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 GCNT4Q9P109 453 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 RIMS2Q9UQ26 1411 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 CTTNBP2Q8WZ74 1663 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 HSPA4LO95757 839 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 GUCY2CP25092 1073 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 ADCY2Q08462 1091 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 SLC39A6Q13433 755 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 CHRNA2Q15822 529 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 CCNYQ8ND76 341 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 KIAA1468Q9P260 1216 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 PHLPP2Q6ZVD8 1323 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 PFKFB1P16118 471 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 PTPROQ16827 1216 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 LARGE2Q8N3Y3 721 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 TRPV6Q9H1D0 765 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 CD109Q6YHK3 1445 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 ESRRBO95718 433 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 CDC25BP30305 580 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 SPATA5Q8NB90 893 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 RETREG2Q8NC44 543 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 C8orf37Q96NL8 207 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 MPP6Q9NZW5 540 aa9.41□□□□□ -0.9
NIPBL-201ENST00000282516 POLR2FP61218 127 aaKnown RBP9.4□□□□□ -0.9
NIPBL-201ENST00000282516 DEPDC1Q5TB30 811 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 ARMCX5Q6P1M9 558 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 PDIK1LQ8N165 341 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 DDX28Q9NUL7 540 aaKnown RBP9.4□□□□□ -0.9
NIPBL-201ENST00000282516 RNF14Q9UBS8 474 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 PMS1P54277 932 aaKnown RBP9.4□□□□□ -0.9
NIPBL-201ENST00000282516 ADAM9Q13443 819 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 NEK9Q8TD19 979 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 MRPL47Q9HD33 250 aaKnown RBP9.4□□□□□ -0.9
NIPBL-201ENST00000282516 HACD3Q9P035 362 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 STRIP2Q9ULQ0 834 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 LAD1O00515 517 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 BLIDQ8IZY5 108 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 SCG3Q8WXD2 468 aaKnown RBP9.4□□□□□ -0.9
NIPBL-201ENST00000282516 PBKQ96KB5 322 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 MTRQ99707 1265 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 SUGCTQ9HAC7 445 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 NFKBIL1Q9UBC1 381 aaPredicted RBP9.4□□□□□ -0.9
NIPBL-201ENST00000282516 SNX2O60749 519 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 KRT37O76014 449 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 TEKT4Q8WW24 435 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 XAGE2Q96GT9 111 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 SELENONQ9NZV5 590 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 WDR17Q8IZU2 1322 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 BASP1P80723 227 aaKnown RBP9.4□□□□□ -0.9
NIPBL-201ENST00000282516 RASSF7Q02833 373 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 ADALQ6DHV7 355 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 TTLL7Q6ZT98 887 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 VPS54Q9P1Q0 977 aa9.4□□□□□ -0.9
NIPBL-201ENST00000282516 NR1D1P20393 614 aa9.4□□□□□ -0.91
NIPBL-201ENST00000282516 STAT2P52630 851 aa9.4□□□□□ -0.91
NIPBL-201ENST00000282516 NUP160Q12769 1436 aa9.4□□□□□ -0.91
NIPBL-201ENST00000282516 C1orf146Q5VVC0 180 aa9.4□□□□□ -0.91
NIPBL-201ENST00000282516 CENPUQ71F23 418 aa9.4□□□□□ -0.91
NIPBL-201ENST00000282516 BZW1Q7L1Q6 419 aaKnown RBP9.4□□□□□ -0.91
NIPBL-201ENST00000282516 RDH13Q8NBN7 331 aa9.4□□□□□ -0.91
NIPBL-201ENST00000282516 GANCQ8TET4 914 aa9.4□□□□□ -0.91
NIPBL-201ENST00000282516 TEKT3Q9BXF9 490 aa9.4□□□□□ -0.91
NIPBL-201ENST00000282516 ZNF215Q9UL58 517 aaPredicted RBP9.4□□□□□ -0.91
NIPBL-201ENST00000282516 PAPOLAP51003 745 aaKnown RBP9.4□□□□□ -0.91
NIPBL-201ENST00000282516 CCDC85BQ15834 202 aaPredicted RBP9.4□□□□□ -0.91
NIPBL-201ENST00000282516 DPP8Q6V1X1 898 aaPredicted RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms