RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 DHTKD1Q96HY7 919 aaPredicted RBP20■□□□□ 0.79
CAPN1-201ENST00000279247 PANK4Q9NVE7 773 aa20■□□□□ 0.79
CAPN1-201ENST00000279247 YBX3P16989 372 aaKnown RBP eCLIP20■□□□□ 0.795e-7■■□□□ 12.9
CAPN1-201ENST00000279247 TMEM119Q4V9L6 283 aa20■□□□□ 0.79
CAPN1-201ENST00000279247 LDHDQ86WU2 507 aa20■□□□□ 0.79
CAPN1-201ENST00000279247 DEFB129Q9H1M3 183 aa20■□□□□ 0.79
CAPN1-201ENST00000279247 BRCA1P38398 1863 aaKnown RBP20■□□□□ 0.79
CAPN1-201ENST00000279247 GCOM1H8Y6P7 765 aaPredicted RBP20■□□□□ 0.79
CAPN1-201ENST00000279247 MFAP3LO75121 409 aa20■□□□□ 0.79
CAPN1-201ENST00000279247 POLR2MP0CAP2 368 aa20■□□□□ 0.79
CAPN1-201ENST00000279247 KRT9P35527 623 aa20■□□□□ 0.79
CAPN1-201ENST00000279247 PBX1P40424 430 aa20■□□□□ 0.79
CAPN1-201ENST00000279247 HERC4Q5GLZ8 1057 aaPredicted RBP20■□□□□ 0.79
CAPN1-201ENST00000279247 CATSPER3Q86XQ3 398 aa20■□□□□ 0.79
CAPN1-201ENST00000279247 ETNPPLQ8TBG4 499 aa20■□□□□ 0.79
CAPN1-201ENST00000279247 LENG9Q96B70 501 aa20■□□□□ 0.79
CAPN1-201ENST00000279247 BMP2KQ9NSY1 1161 aaPredicted RBP20■□□□□ 0.79
CAPN1-201ENST00000279247 PCNTO95613 3336 aa19.99■□□□□ 0.79
CAPN1-201ENST00000279247 STX10O60499 249 aa19.99■□□□□ 0.79
CAPN1-201ENST00000279247 SREBF1P36956 1147 aa19.99■□□□□ 0.79
CAPN1-201ENST00000279247 COASYQ13057 564 aa19.99■□□□□ 0.79
CAPN1-201ENST00000279247 FER1L6Q2WGJ9 1857 aa19.99■□□□□ 0.79
CAPN1-201ENST00000279247 RAD9BQ6WBX8 426 aa19.99■□□□□ 0.79
CAPN1-201ENST00000279247 IRX2Q9BZI1 471 aaPredicted RBP19.99■□□□□ 0.79
CAPN1-201ENST00000279247 CCPG1Q9ULG6 757 aa19.99■□□□□ 0.79
CAPN1-201ENST00000279247 SLFN12Q8IYM2 578 aa19.99■□□□□ 0.79
CAPN1-201ENST00000279247 PAXBP1Q9Y5B6 917 aa19.99■□□□□ 0.79
CAPN1-201ENST00000279247 BICDL2A1A5D9 508 aa19.98■□□□□ 0.79
CAPN1-201ENST00000279247 FOSP01100 380 aaPredicted RBP19.98■□□□□ 0.79
CAPN1-201ENST00000279247 ALAS1P13196 640 aa19.98■□□□□ 0.79
CAPN1-201ENST00000279247 ZKSCAN4Q969J2 545 aaPredicted RBP19.98■□□□□ 0.79
CAPN1-201ENST00000279247 NOC4LQ9BVI4 516 aaKnown RBP19.98■□□□□ 0.79
CAPN1-201ENST00000279247 BCAS3Q9H6U6 928 aa19.98■□□□□ 0.79
CAPN1-201ENST00000279247 PSME4Q14997 1843 aa19.98■□□□□ 0.79
CAPN1-201ENST00000279247 DDNO94850 711 aaPredicted RBP19.98■□□□□ 0.79
CAPN1-201ENST00000279247 TBC1D8BQ0IIM8 1120 aa19.98■□□□□ 0.79
CAPN1-201ENST00000279247 MTMR2Q13614 643 aa19.98■□□□□ 0.79
CAPN1-201ENST00000279247 CTTNQ14247 550 aaKnown RBP19.98■□□□□ 0.79
CAPN1-201ENST00000279247 PIGOQ8TEQ8 1089 aa19.98■□□□□ 0.79
CAPN1-201ENST00000279247 SH2D4AQ9H788 454 aa19.98■□□□□ 0.79
CAPN1-201ENST00000279247 RAVER2Q9HCJ3 691 aaKnown RBP19.98■□□□□ 0.79
CAPN1-201ENST00000279247 ABCB11O95342 1321 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 EML1O00423 815 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 EPS15P42566 896 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 FKBP1CQ5VVH2 108 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 REXO1L1PQ8IX06 675 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 HOOK2Q96ED9 719 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 TEPSINQ96N21 525 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 NAP1L4Q99733 375 aaKnown RBP19.97■□□□□ 0.79
CAPN1-201ENST00000279247 WDR18Q9BV38 432 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 NT5C3AQ9H0P0 336 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 LRRC10BA6NIK2 292 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 NFIBO00712 420 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 ZBTB39O15060 712 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 FLOT1O75955 427 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 MB21D1Q8N884 522 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 MTMR14Q8NCE2 650 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 TRPM4Q8TD43 1214 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 DNAJC19Q96DA6 116 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 ZBED3Q96IU2 234 aaPredicted RBP19.97■□□□□ 0.79
CAPN1-201ENST00000279247 THAP9Q9H5L6 903 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 KDM3AQ9Y4C1 1321 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 PHF20L1A8MW92 1017 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 FZD9O00144 591 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 GNG11P61952 73 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 KIF4BQ2VIQ3 1234 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 FAM26FQ5R3K3 315 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 TPH2Q8IWU9 490 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 ACRBPQ8NEB7 543 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 CRYGNQ8WXF5 182 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 MRPL44Q9H9J2 332 aaKnown RBP19.97■□□□□ 0.79
CAPN1-201ENST00000279247 PGAP2Q9UHJ9 254 aa19.97■□□□□ 0.79
CAPN1-201ENST00000279247 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.97■□□□□ 0.793e-6■□□□□ 10.3
CAPN1-201ENST00000279247 TTC26A0AVF1 554 aa19.96■□□□□ 0.79
CAPN1-201ENST00000279247 LGALS16A8MUM7 142 aa19.96■□□□□ 0.79
CAPN1-201ENST00000279247 ZSCAN12O43309 604 aa19.96■□□□□ 0.79
CAPN1-201ENST00000279247 TRIM21P19474 475 aaKnown RBP19.96■□□□□ 0.79
CAPN1-201ENST00000279247 SPP2Q13103 211 aa19.96■□□□□ 0.79
CAPN1-201ENST00000279247 TNFAIP1Q13829 316 aa19.96■□□□□ 0.79
CAPN1-201ENST00000279247 SYCP1Q15431 976 aa19.96■□□□□ 0.79
CAPN1-201ENST00000279247 ZNF215Q9UL58 517 aaPredicted RBP19.96■□□□□ 0.79
CAPN1-201ENST00000279247 CYP3A7-CYP3A51PA0A087WV96 503 aa19.96■□□□□ 0.79
CAPN1-201ENST00000279247 SFI1A8K8P3 1242 aa19.96■□□□□ 0.79
CAPN1-201ENST00000279247 TBC1D12O60347 775 aa19.96■□□□□ 0.79
CAPN1-201ENST00000279247 CYP3A7P24462 503 aa19.96■□□□□ 0.79
CAPN1-201ENST00000279247 EEF1GP26641 437 aaKnown RBP19.96■□□□□ 0.79
CAPN1-201ENST00000279247 SPIRE1Q08AE8 756 aa19.96■□□□□ 0.79
CAPN1-201ENST00000279247 HAUS3Q68CZ6 603 aa19.96■□□□□ 0.79
CAPN1-201ENST00000279247 CNGA4Q8IV77 575 aa19.96■□□□□ 0.79
CAPN1-201ENST00000279247 VPS33BQ9H267 617 aa19.96■□□□□ 0.79
CAPN1-201ENST00000279247 BHMT2Q9H2M3 363 aa19.96■□□□□ 0.79
CAPN1-201ENST00000279247 PVALEFA0A1B0GWK0 134 aa19.95■□□□□ 0.78
CAPN1-201ENST00000279247 URI1O94763 535 aaPredicted RBP19.95■□□□□ 0.78
CAPN1-201ENST00000279247 ANGEL2Q5VTE6 544 aaKnown RBP19.95■□□□□ 0.78
CAPN1-201ENST00000279247 ERMNQ8TAM6 284 aa19.95■□□□□ 0.78
CAPN1-201ENST00000279247 CHP1Q99653 195 aa19.95■□□□□ 0.78
CAPN1-201ENST00000279247 RANBP17Q9H2T7 1088 aaKnown RBP19.95■□□□□ 0.78
CAPN1-201ENST00000279247 COL2A1P02458 1487 aaPredicted RBP19.95■□□□□ 0.78
CAPN1-201ENST00000279247 TRAF5O00463 557 aa19.95■□□□□ 0.78
CAPN1-201ENST00000279247 CYP11B2P19099 503 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms