RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 ALKBH8Q96BT7 664 aaKnown RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 EPAS1Q99814 870 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 KLC2Q9H0B6 622 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 VIPAS39Q9H9C1 493 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 SMARCAL1Q9NZC9 954 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 SLC8A2Q9UPR5 921 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 GRID2IPA4D2P6 1211 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 HSPA1AP0DMV8 641 aaKnown RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 HSPA1BP0DMV9 641 aaKnown RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 MAP4P27816 1152 aaKnown RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 CCDC15Q0P6D6 951 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 TCP11X2Q5H9J9 407 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 EFHBQ8N7U6 833 aa5.88□□□□□ -1.47
XRN1-201ENST00000264951 FAM207AQ9NSI2 230 aaPredicted RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.88□□□□□ -1.47
XRN1-201ENST00000264951 FAM135BQ49AJ0 1406 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 COPB1P53618 953 aaKnown RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 GRM1Q13255 1194 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 INAQ16352 499 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 PLEKHM2Q8IWE5 1019 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 FAM178BQ8IXR5 827 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 MRRFQ96E11 262 aaKnown RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 LSM14BQ9BX40 385 aaKnown RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 USTQ9Y2C2 406 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 ABCC12Q96J65 1359 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 TARSL2A2RTX5 802 aaKnown RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 SMARCA1P28370 1054 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 ZBED6P86452 979 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 THOC5Q13769 683 aaKnown RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 RAPH1Q70E73 1250 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 IKBIPQ70UQ0 350 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 NOSTRINQ8IVI9 506 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 PGBD1Q96JS3 809 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 ECT2Q9H8V3 914 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 COG4Q9H9E3 785 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 RPSAP08865 295 aaKnown RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 LAMB3Q13751 1172 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 SGO2Q562F6 1265 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 DAB2IPQ5VWQ8 1189 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 TRMT10CQ7L0Y3 403 aaKnown RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 RMDN1Q96DB5 314 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 ZC3H12CQ9C0D7 883 aaKnown RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 TRPV6Q9H1D0 765 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 WDR64B1ANS9 1081 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 SGSM2O43147 1006 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 STRNO43815 780 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 GGPS1O95749 300 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 ACADSP16219 412 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 ARL4CP56559 192 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 FKBP3Q00688 224 aaKnown RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 RIPPLY1Q0D2K3 151 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 EXOC3L4Q17RC7 722 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 SPDYE1Q8NFV5 336 aaPredicted RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 RBM41Q96IZ5 413 aaKnown RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 FANCEQ9HB96 536 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 CNGB3Q9NQW8 809 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 CHMP2BQ9UQN3 213 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 IVNS1ABPQ9Y6Y0 642 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 RPRD2Q5VT52 1461 aaKnown RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 TMOD1P28289 359 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 PMS2P54278 862 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 PUM3Q15397 648 aaKnown RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 GJC2Q5T442 439 aaPredicted RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 NT5C1BQ96P26 610 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 SETDB2Q96T68 719 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 WWP1Q9H0M0 922 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 PRG3Q9Y2Y8 225 aaPredicted RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 CAB39Q9Y376 341 aaPredicted RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 NPC1L1Q9UHC9 1359 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 ZRANB2O95218 330 aaKnown RBP eCLIP5.87□□□□□ -1.47
XRN1-201ENST00000264951 RALBP11234 206 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 XPAP23025 273 aaPredicted RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 CCND1P24385 295 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 DMP1Q13316 513 aaPredicted RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 ARL13BQ3SXY8 428 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 C1orf146Q5VVC0 180 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 TTC16Q8NEE8 873 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 DEPTORQ8TB45 409 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 CHURC1Q8WUH1 139 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 LMBRD1Q9NUN5 540 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 TUBA8Q9NY65 449 aaPredicted RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 KIF17Q9P2E2 1029 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 UBA2Q9UBT2 640 aaPredicted RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 KRT7P08729 469 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 CDC27P30260 824 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 CA8P35219 290 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 TFDP1Q14186 410 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 CASP8Q14790 479 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 E2F5Q15329 346 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 AKNAD1Q5T1N1 836 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 GOLPH3LQ9H4A5 285 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 DYTNA2CJ06 578 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 LRRIQ3A6PVS8 624 aaPredicted RBP5.87□□□□□ -1.47
XRN1-201ENST00000264951 ASAP2O43150 1006 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 HAUS5O94927 633 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 NAIPQ13075 1403 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 CABP7Q86V35 215 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 ZNF555Q8NEP9 628 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 CCDC85AQ96PX6 553 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms