RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 CT47A1Q5JQC4 288 aaPredicted RBP15.15■□□□□ 0.02
VMP1-201ENST00000262291 NYAP1Q6ZVC0 841 aa15.15■□□□□ 0.02
VMP1-201ENST00000262291 ETNPPLQ8TBG4 499 aa15.15■□□□□ 0.02
VMP1-201ENST00000262291 P2RX5Q93086 422 aa15.15■□□□□ 0.02
VMP1-201ENST00000262291 CCDC47Q96A33 483 aaKnown RBP15.15■□□□□ 0.02
VMP1-201ENST00000262291 SEMA6BQ9H3T3 888 aa15.15■□□□□ 0.02
VMP1-201ENST00000262291 BCAS3Q9H6U6 928 aa15.15■□□□□ 0.02
VMP1-201ENST00000262291 LIMA1Q9UHB6 759 aaKnown RBP15.15■□□□□ 0.02
VMP1-201ENST00000262291 KIF13BQ9NQT8 1826 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 A0A0U1RQJ8 604 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 AKR1B15C9JRZ8 316 aaPredicted RBP15.14■□□□□ 0.01
VMP1-201ENST00000262291 MSH4O15457 936 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 AP3B2Q13367 1082 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 SYT10Q6XYQ8 523 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 KRT222Q8N1A0 295 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 ATRIPQ8WXE1 791 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 CRYGNQ8WXF5 182 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 DEFB129Q9H1M3 183 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 STK17AQ9UEE5 414 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 B4DLN1 442 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 H7C1D1 291 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 GYPCP04921 128 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 ASNSP08243 561 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 SREBF1P36956 1147 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 PBX1P40424 430 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 KLK7P49862 253 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 FKBP1CQ5VVH2 108 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 LDHDQ86WU2 507 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 CCDC112Q8NEF3 446 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 GLT8D2Q9H1C3 349 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 VPS33BQ9H267 617 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 MAGEF1Q9HAY2 307 aa15.14■□□□□ 0.01
VMP1-201ENST00000262291 FER1L6Q2WGJ9 1857 aa15.13■□□□□ 0.01
VMP1-201ENST00000262291 TBC1D12O60347 775 aa15.13■□□□□ 0.01
VMP1-201ENST00000262291 MYL1P05976 194 aa15.13■□□□□ 0.01
VMP1-201ENST00000262291 PLA2G4BP0C869 781 aa15.13■□□□□ 0.01
VMP1-201ENST00000262291 PABPC4Q13310 644 aaKnown RBP eCLIP15.13■□□□□ 0.01
VMP1-201ENST00000262291 CHURC1Q8WUH1 139 aa15.13■□□□□ 0.01
VMP1-201ENST00000262291 ZKSCAN4Q969J2 545 aaPredicted RBP15.13■□□□□ 0.01
VMP1-201ENST00000262291 CTAGE1Q96RT6 745 aa15.13■□□□□ 0.01
VMP1-201ENST00000262291 WDR18Q9BV38 432 aa15.13■□□□□ 0.01
VMP1-201ENST00000262291 TANGO6Q9C0B7 1094 aa15.13■□□□□ 0.01
VMP1-201ENST00000262291 RGL1Q9NZL6 768 aa15.13■□□□□ 0.01
VMP1-201ENST00000262291 EML1O00423 815 aa15.13■□□□□ 0.01
VMP1-201ENST00000262291 KIF4BQ2VIQ3 1234 aa15.13■□□□□ 0.01
VMP1-201ENST00000262291 UNC13DQ70J99 1090 aa15.13■□□□□ 0.01
VMP1-201ENST00000262291 GPBP1Q86WP2 473 aa15.13■□□□□ 0.01
VMP1-201ENST00000262291 CATSPER3Q86XQ3 398 aa15.13■□□□□ 0.01
VMP1-201ENST00000262291 CYP3A7-CYP3A51PA0A087WV96 503 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 GCOM1H8Y6P7 765 aaPredicted RBP15.12■□□□□ 0.01
VMP1-201ENST00000262291 POLR2MP0CAP2 368 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 CYP3A7P24462 503 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 CCNE1P24864 410 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 ZNF280AP59817 542 aaPredicted RBP15.12■□□□□ 0.01
VMP1-201ENST00000262291 MTMR2Q13614 643 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 CNNM4Q6P4Q7 775 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 NELFCDQ8IXH7 590 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 ANKRD20A12PQ8NF67 263 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 RANBP17Q9H2T7 1088 aaKnown RBP15.12■□□□□ 0.01
VMP1-201ENST00000262291 MAGEC2Q9UBF1 373 aaPredicted RBP15.12■□□□□ 0.01
VMP1-201ENST00000262291 CCPG1Q9ULG6 757 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 NFIBO00712 420 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 ZBTB39O15060 712 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 SPIRE1Q08AE8 756 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 COASYQ13057 564 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 ANGEL2Q5VTE6 544 aaKnown RBP15.12■□□□□ 0.01
VMP1-201ENST00000262291 TRPM4Q8TD43 1214 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 DNAJC19Q96DA6 116 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 HOOK2Q96ED9 719 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 DHTKD1Q96HY7 919 aaPredicted RBP15.12■□□□□ 0.01
VMP1-201ENST00000262291 CNOT6LQ96LI5 555 aaKnown RBP15.12■□□□□ 0.01
VMP1-201ENST00000262291 RAVER2Q9HCJ3 691 aaKnown RBP15.12■□□□□ 0.01
VMP1-201ENST00000262291 PANK4Q9NVE7 773 aa15.12■□□□□ 0.01
VMP1-201ENST00000262291 DDX39AO00148 427 aaKnown RBP15.11■□□□□ 0.01
VMP1-201ENST00000262291 MTIF2P46199 727 aaKnown RBP15.11■□□□□ 0.01
VMP1-201ENST00000262291 SGIP1Q9BQI5 828 aa15.11■□□□□ 0.01
VMP1-201ENST00000262291 PPP2R2CQ9Y2T4 447 aa15.11■□□□□ 0.01
VMP1-201ENST00000262291 KRT18P05783 430 aaKnown RBP15.11■□□□□ 0.01
VMP1-201ENST00000262291 ALAS1P13196 640 aa15.11■□□□□ 0.01
VMP1-201ENST00000262291 PTGER2P43116 358 aa15.11■□□□□ 0.01
VMP1-201ENST00000262291 MMP14P50281 582 aa15.11■□□□□ 0.01
VMP1-201ENST00000262291 CTTNQ14247 550 aaKnown RBP15.11■□□□□ 0.01
VMP1-201ENST00000262291 RAD9BQ6WBX8 426 aa15.11■□□□□ 0.01
VMP1-201ENST00000262291 REXO1L1PQ8IX06 675 aa15.11■□□□□ 0.01
VMP1-201ENST00000262291 WNK4Q96J92 1243 aa15.11■□□□□ 0.01
VMP1-201ENST00000262291 MBOAT7Q96N66 472 aa15.11■□□□□ 0.01
VMP1-201ENST00000262291 PURBQ96QR8 312 aaKnown RBP15.11■□□□□ 0.01
VMP1-201ENST00000262291 TUBGCP2Q9BSJ2 902 aa15.11■□□□□ 0.01
VMP1-201ENST00000262291 ABCB11O95342 1321 aa15.11■□□□□ 0.01
VMP1-201ENST00000262291 FOSP01100 380 aaPredicted RBP15.1■□□□□ 0.01
VMP1-201ENST00000262291 SPP2Q13103 211 aa15.1■□□□□ 0.01
VMP1-201ENST00000262291 ARHGAP27Q6ZUM4 889 aa15.1■□□□□ 0.01
VMP1-201ENST00000262291 SLFN12Q8IYM2 578 aa15.1■□□□□ 0.01
VMP1-201ENST00000262291 LRRC10BA6NIK2 292 aa15.1■□□□□ 0.01
VMP1-201ENST00000262291 ARHGAP6O43182 974 aa15.1■□□□□ 0.01
VMP1-201ENST00000262291 MFAP3LO75121 409 aa15.1■□□□□ 0.01
VMP1-201ENST00000262291 SPATA31C1P0DKV0 1188 aa15.1■□□□□ 0.01
VMP1-201ENST00000262291 SPAG1Q07617 926 aa15.1■□□□□ 0.01
VMP1-201ENST00000262291 Q4G0T1 1027 aa15.1■□□□□ 0.01
VMP1-201ENST00000262291 ARSHQ5FYA8 562 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms