RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 NUDT12Q9BQG2 462 aa31.09■■■□□ 2.57
SMARCD3-201ENST00000262188 FLRT1Q9NZU1 646 aa31.09■■■□□ 2.57
SMARCD3-201ENST00000262188 LRRC37A2A6NM11 1700 aa31.09■■■□□ 2.57
SMARCD3-201ENST00000262188 VWA3AA6NCI4 1184 aa31.08■■■□□ 2.57
SMARCD3-201ENST00000262188 TMEM87AQ8NBN3 555 aa31.08■■■□□ 2.57
SMARCD3-201ENST00000262188 ETNPPLQ8TBG4 499 aa31.08■■■□□ 2.57
SMARCD3-201ENST00000262188 ZNF296Q8WUU4 475 aaPredicted RBP31.08■■■□□ 2.57
SMARCD3-201ENST00000262188 PANK2Q9BZ23 570 aa31.08■■■□□ 2.57
SMARCD3-201ENST00000262188 GRPEL1Q9HAV7 217 aa31.08■■■□□ 2.57
SMARCD3-201ENST00000262188 STXBP2Q15833 593 aa31.08■■■□□ 2.57
SMARCD3-201ENST00000262188 BBXQ8WY36 941 aaPredicted RBP31.08■■■□□ 2.57
SMARCD3-201ENST00000262188 KCNMB3Q9NPA1 279 aa31.08■■■□□ 2.57
SMARCD3-201ENST00000262188 SEMA3FQ13275 785 aa31.07■■■□□ 2.56
SMARCD3-201ENST00000262188 AXDND1Q5T1B0 1012 aaPredicted RBP31.07■■■□□ 2.56
SMARCD3-201ENST00000262188 SEPT14Q6ZU15 432 aa31.07■■■□□ 2.56
SMARCD3-201ENST00000262188 ARMCX2Q7L311 632 aa31.07■■■□□ 2.56
SMARCD3-201ENST00000262188 FBXO16Q8IX29 292 aaPredicted RBP31.07■■■□□ 2.56
SMARCD3-201ENST00000262188 JADE2Q9NQC1 790 aa31.07■■■□□ 2.56
SMARCD3-201ENST00000262188 KCNH7Q9NS40 1196 aa31.07■■■□□ 2.56
SMARCD3-201ENST00000262188 SAGE1Q9NXZ1 904 aa31.07■■■□□ 2.56
SMARCD3-201ENST00000262188 ZNF236Q9UL36 1845 aa31.07■■■□□ 2.56
SMARCD3-201ENST00000262188 PPP6R2O75170 966 aa31.06■■■□□ 2.56
SMARCD3-201ENST00000262188 PRKCZQ05513 592 aa31.06■■■□□ 2.56
SMARCD3-201ENST00000262188 NAP1L4Q99733 375 aaKnown RBP31.06■■■□□ 2.56
SMARCD3-201ENST00000262188 BEGAINQ9BUH8 593 aa31.06■■■□□ 2.56
SMARCD3-201ENST00000262188 ELP1O95163 1332 aa31.06■■■□□ 2.56
SMARCD3-201ENST00000262188 MARCH6O60337 910 aa31.06■■■□□ 2.56
SMARCD3-201ENST00000262188 SORBS3O60504 671 aa31.06■■■□□ 2.56
SMARCD3-201ENST00000262188 MTMR1Q13613 665 aa31.06■■■□□ 2.56
SMARCD3-201ENST00000262188 KRI1Q8N9T8 703 aaKnown RBP31.06■■■□□ 2.56
SMARCD3-201ENST00000262188 CSRNP2Q9H175 543 aa31.06■■■□□ 2.56
SMARCD3-201ENST00000262188 BCAS3Q9H6U6 928 aa31.06■■■□□ 2.56
SMARCD3-201ENST00000262188 WBP1LQ9NX94 342 aa31.06■■■□□ 2.56
SMARCD3-201ENST00000262188 ATP9AO75110 1047 aa31.05■■■□□ 2.56
SMARCD3-201ENST00000262188 BMP15O95972 392 aa31.05■■■□□ 2.56
SMARCD3-201ENST00000262188 TECP42680 631 aa31.05■■■□□ 2.56
SMARCD3-201ENST00000262188 DMTNQ08495 405 aa31.05■■■□□ 2.56
SMARCD3-201ENST00000262188 INPP4AQ96PE3 977 aaPredicted RBP31.05■■■□□ 2.56
SMARCD3-201ENST00000262188 SRPRBQ9Y5M8 271 aaKnown RBP31.05■■■□□ 2.56
SMARCD3-201ENST00000262188 CDC25AP30304 524 aa31.05■■■□□ 2.56
SMARCD3-201ENST00000262188 FLT3LGP49771 235 aa31.05■■■□□ 2.56
SMARCD3-201ENST00000262188 USP49Q70CQ1 688 aa31.05■■■□□ 2.56
SMARCD3-201ENST00000262188 IPO4Q8TEX9 1081 aaKnown RBP31.05■■■□□ 2.56
SMARCD3-201ENST00000262188 HTTP42858 3142 aa31.04■■■□□ 2.56
SMARCD3-201ENST00000262188 KIAA1217Q5T5P2 1943 aa31.04■■■□□ 2.56
SMARCD3-201ENST00000262188 PP2D1A8MPX8 630 aa31.04■■■□□ 2.56
SMARCD3-201ENST00000262188 GOLGA6L22H0YM25 854 aa31.04■■■□□ 2.56
SMARCD3-201ENST00000262188 EIF3JO75822 258 aaKnown RBP31.04■■■□□ 2.56
SMARCD3-201ENST00000262188 ORC2Q13416 577 aaPredicted RBP31.04■■■□□ 2.56
SMARCD3-201ENST00000262188 KIF22Q14807 665 aa31.04■■■□□ 2.56
SMARCD3-201ENST00000262188 ZNF577Q9BSK1 485 aa31.04■■■□□ 2.56
SMARCD3-201ENST00000262188 PTGS1P23219 599 aa31.03■■■□□ 2.56
SMARCD3-201ENST00000262188 RGS2P41220 211 aa31.03■■■□□ 2.56
SMARCD3-201ENST00000262188 TMEM63BQ5T3F8 832 aa31.03■■■□□ 2.56
SMARCD3-201ENST00000262188 XRRA1Q6P2D8 792 aa31.03■■■□□ 2.56
SMARCD3-201ENST00000262188 SOCS4Q8WXH5 440 aa31.03■■■□□ 2.56
SMARCD3-201ENST00000262188 TTC12Q9H892 705 aaPredicted RBP31.03■■■□□ 2.56
SMARCD3-201ENST00000262188 PDGFCQ9NRA1 345 aa31.03■■■□□ 2.56
SMARCD3-201ENST00000262188 DDX39AO00148 427 aaKnown RBP31.03■■■□□ 2.56
SMARCD3-201ENST00000262188 SNAI1O95863 264 aaPredicted RBP31.03■■■□□ 2.56
SMARCD3-201ENST00000262188 SHC4Q6S5L8 630 aa31.03■■■□□ 2.56
SMARCD3-201ENST00000262188 DTHD1Q6ZMT9 781 aa31.03■■■□□ 2.56
SMARCD3-201ENST00000262188 AGO4Q9HCK5 861 aaKnown RBP31.03■■■□□ 2.56
SMARCD3-201ENST00000262188 POTEMA6NI47 508 aa31.02■■■□□ 2.56
SMARCD3-201ENST00000262188 ASB14A6NK59 587 aa31.02■■■□□ 2.56
SMARCD3-201ENST00000262188 FKTNO75072 461 aa31.02■■■□□ 2.56
SMARCD3-201ENST00000262188 ITGB3BPQ13352 177 aaPredicted RBP31.02■■■□□ 2.56
SMARCD3-201ENST00000262188 PRAMEF19Q5SWL8 479 aa31.02■■■□□ 2.56
SMARCD3-201ENST00000262188 JMYQ8N9B5 988 aa31.02■■■□□ 2.56
SMARCD3-201ENST00000262188 MORC4Q8TE76 937 aa31.02■■■□□ 2.56
SMARCD3-201ENST00000262188 TINF2Q9BSI4 451 aa31.02■■■□□ 2.56
SMARCD3-201ENST00000262188 CDKN2AIPQ9NXV6 580 aaPredicted RBP31.02■■■□□ 2.56
SMARCD3-201ENST00000262188 CYP2C19P33261 490 aa31.01■■■□□ 2.56
SMARCD3-201ENST00000262188 SETQ01105 290 aaPredicted RBP31.01■■■□□ 2.56
SMARCD3-201ENST00000262188 CSPP1Q1MSJ5 1256 aa31.01■■■□□ 2.56
SMARCD3-201ENST00000262188 APBA2Q99767 749 aa31.01■■■□□ 2.56
SMARCD3-201ENST00000262188 GOLPH3LQ9H4A5 285 aa31.01■■■□□ 2.56
SMARCD3-201ENST00000262188 DIS3Q9Y2L1 958 aaKnown RBP31.01■■■□□ 2.56
SMARCD3-201ENST00000262188 IPO5O00410 1097 aaKnown RBP31.01■■■□□ 2.55
SMARCD3-201ENST00000262188 LAD1O00515 517 aa31.01■■■□□ 2.55
SMARCD3-201ENST00000262188 HOXC6P09630 235 aa31.01■■■□□ 2.55
SMARCD3-201ENST00000262188 SP2Q02086 613 aa31.01■■■□□ 2.55
SMARCD3-201ENST00000262188 ARL6IP4Q66PJ3 421 aaKnown RBP31.01■■■□□ 2.55
SMARCD3-201ENST00000262188 ZNF467Q7Z7K2 595 aaPredicted RBP31.01■■■□□ 2.55
SMARCD3-201ENST00000262188 TELO2Q9Y4R8 837 aa31.01■■■□□ 2.55
SMARCD3-201ENST00000262188 CUTAO60888 179 aa31■■■□□ 2.55
SMARCD3-201ENST00000262188 PRPHP41219 470 aa31■■■□□ 2.55
SMARCD3-201ENST00000262188 NIPA1Q7RTP0 329 aa31■■■□□ 2.55
SMARCD3-201ENST00000262188 NLRX1Q86UT6 975 aa31■■■□□ 2.55
SMARCD3-201ENST00000262188 SLC5A5Q92911 643 aa31■■■□□ 2.55
SMARCD3-201ENST00000262188 FERMT2Q96AC1 680 aa31■■■□□ 2.55
SMARCD3-201ENST00000262188 GPRASP2Q96D09 838 aa31■■■□□ 2.55
SMARCD3-201ENST00000262188 EPSTI1Q96J88 318 aa31■■■□□ 2.55
SMARCD3-201ENST00000262188 SLC5A4Q9NY91 659 aa31■■■□□ 2.55
SMARCD3-201ENST00000262188 DOCK5Q9H7D0 1870 aa31■■■□□ 2.55
SMARCD3-201ENST00000262188 GOLGA6L4A6NEF3 574 aa30.99■■■□□ 2.55
SMARCD3-201ENST00000262188 KIF20AO95235 890 aa30.99■■■□□ 2.55
SMARCD3-201ENST00000262188 ARIH2O95376 493 aa30.99■■■□□ 2.55
SMARCD3-201ENST00000262188 ADALQ6DHV7 355 aa30.99■■■□□ 2.55
SMARCD3-201ENST00000262188 MAMDC4Q6UXC1 1216 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms