RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 EFCC1Q9HA90 598 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 HAUS2Q9NVX0 235 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 USP17L5A8MUK1 530 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 NKRFO15226 690 aaKnown RBP eCLIP11.09□□□□□ -0.63
PALB2-201ENST00000261584 ADCY7P51828 1080 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 TUBB4BP68371 445 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 PKN1Q16512 942 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 MYCT1Q8N699 235 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 ZNF579Q8NAF0 562 aaKnown RBP11.09□□□□□ -0.63
PALB2-201ENST00000261584 TRIM51Q9BSJ1 452 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 FAM167BQ9BTA0 163 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 PCIF1Q9H4Z3 704 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 ZNF287Q9HBT7 754 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 ASIC3Q9UHC3 531 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 KCNQ2O43526 872 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 FAM13AO94988 1023 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 HARSP12081 509 aaKnown RBP11.08□□□□□ -0.64
PALB2-201ENST00000261584 KLRC1P26715 233 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 CORO7P57737 925 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 MESDQ14696 234 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 NSMFQ6X4W1 530 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 REXO2Q9Y3B8 237 aaKnown RBP11.08□□□□□ -0.64
PALB2-201ENST00000261584 SYF2O95926 243 aaKnown RBP11.08□□□□□ -0.64
PALB2-201ENST00000261584 TNFAIP3P21580 790 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 SSTR3P32745 418 aaPredicted RBP11.08□□□□□ -0.64
PALB2-201ENST00000261584 RFC4P35249 363 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 GTF2IP78347 998 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 FAM83BQ5T0W9 1011 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 DPH6Q7L8W6 267 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 GSTA5Q7RTV2 222 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 ANKS4BQ8N8V4 417 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 PIGOQ8TEQ8 1089 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 CCDC127Q96BQ5 260 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 CAPN11Q9UMQ6 739 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 THRAP3Q9Y2W1 955 aaKnown RBP11.08□□□□□ -0.64
PALB2-201ENST00000261584 TMEM94Q12767 1356 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 KIF20BQ96Q89 1820 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 UBAP1LF5GYI3 381 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 RGS16O15492 202 aaPredicted RBP11.08□□□□□ -0.64
PALB2-201ENST00000261584 ACSL3O95573 720 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 FGGP02679 453 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 TRAPPC11Q7Z392 1133 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 FAM118BQ9BPY3 351 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 TRIM9Q9C026 710 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 TMOD4Q9NZQ9 345 aa11.08□□□□□ -0.64
PALB2-201ENST00000261584 ARMCX3Q9UH62 379 aaPredicted RBP11.08□□□□□ -0.64
PALB2-201ENST00000261584 POTEB3A0JP26 581 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 POTECB2RU33 542 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 MAP2K7O14733 419 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 CFBP00751 764 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 HOXA13P31271 388 aaPredicted RBP11.07□□□□□ -0.64
PALB2-201ENST00000261584 TROAPQ12815 778 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 MAN2A1Q16706 1144 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 TMEM132AQ24JP5 1023 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 POTEBQ6S5H4 581 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 MTMR8Q96EF0 704 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 RPGRIP1Q96KN7 1286 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 TMEM47Q9BQJ4 181 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 FBXL5Q9UKA1 691 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 RTCBQ9Y3I0 505 aaKnown RBP11.07□□□□□ -0.64
PALB2-201ENST00000261584 CDHR2Q9BYE9 1310 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 PXDNLA1KZ92 1463 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 CCDC172P0C7W6 258 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 PFKFB3Q16875 520 aaPredicted RBP11.07□□□□□ -0.64
PALB2-201ENST00000261584 DOK7Q18PE1 504 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 MFSD14BQ5SR56 506 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 GKAP1Q5VSY0 366 aaPredicted RBP11.07□□□□□ -0.64
PALB2-201ENST00000261584 CDKAL1Q5VV42 579 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 KRT25Q7Z3Z0 450 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 SPIRE2Q8WWL2 714 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 CCT8L2Q96SF2 557 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 DDX25Q9UHL0 483 aaKnown RBP11.07□□□□□ -0.64
PALB2-201ENST00000261584 H0Y3Z8 333 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 EIF3HO15372 352 aaKnown RBP eCLIP11.07□□□□□ -0.64
PALB2-201ENST00000261584 RAD51CO43502 376 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 XRCC5P13010 732 aaKnown RBP11.07□□□□□ -0.64
PALB2-201ENST00000261584 BTDP43251 543 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 SARSP49591 514 aaKnown RBP11.07□□□□□ -0.64
PALB2-201ENST00000261584 SLC51AQ86UW1 340 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 MSANTD4Q8NCY6 345 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 CCDC26Q8TAB7 109 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 MTRQ99707 1265 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 ARHGAP20Q9P2F6 1191 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 ATP6V0A2Q9Y487 856 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 TMEM131LA2VDJ0 1609 aa11.07□□□□□ -0.64
PALB2-201ENST00000261584 LOC102724428A0A0B4J2F2 783 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 YY1P25490 414 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 LSP1P33241 339 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 SIK1P57059 783 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 FAM98CQ17RN3 349 aaKnown RBP11.06□□□□□ -0.64
PALB2-201ENST00000261584 ALKBH5Q6P6C2 394 aaKnown RBP11.06□□□□□ -0.64
PALB2-201ENST00000261584 FAM47EQ6ZV65 393 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 NLRP14Q86W24 1093 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 LRRC45Q96CN5 670 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 DHTKD1Q96HY7 919 aaPredicted RBP11.06□□□□□ -0.64
PALB2-201ENST00000261584 HOMER2Q9NSB8 354 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 USP32Q8NFA0 1604 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 POTEFA5A3E0 1075 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 MYMKA6NI61 221 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 TTI1O43156 1089 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms